RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
SPIDR-215ENST00000521798 SLC27A5Q9Y2P5 690 aa11.07□□□□□ -0.64
SPIDR-215ENST00000521798 PSEN2P49810 448 aa11.06□□□□□ -0.64
SPIDR-215ENST00000521798 FAM69CQ0P6D2 419 aa11.06□□□□□ -0.64
SPIDR-215ENST00000521798 PTK7Q13308 1070 aa11.06□□□□□ -0.64
SPIDR-215ENST00000521798 DEPDC4Q8N2C3 294 aa11.06□□□□□ -0.64
SPIDR-215ENST00000521798 SOWAHDA6NJG2 315 aa11.05□□□□□ -0.64
SPIDR-215ENST00000521798 F12P00748 615 aaPredicted RBP11.05□□□□□ -0.64
SPIDR-215ENST00000521798 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
SPIDR-215ENST00000521798 ARAP1Q96P48 1450 aa11.05□□□□□ -0.64
SPIDR-215ENST00000521798 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
SPIDR-215ENST00000521798 RNF40O75150 1001 aa11.04□□□□□ -0.64
SPIDR-215ENST00000521798 FAM200AQ8TCP9 573 aa11.04□□□□□ -0.64
SPIDR-215ENST00000521798 SHROOM2Q13796 1616 aa11.03□□□□□ -0.64
SPIDR-215ENST00000521798 ACTN4O43707 911 aaKnown RBP11.03□□□□□ -0.64
SPIDR-215ENST00000521798 PUS10Q3MIT2 529 aaKnown RBP11.03□□□□□ -0.64
SPIDR-215ENST00000521798 LAPTM4BQ86VI4 370 aa11.03□□□□□ -0.64
SPIDR-215ENST00000521798 ZNF592Q92610 1267 aa11.03□□□□□ -0.64
SPIDR-215ENST00000521798 CDCA7Q9BWT1 371 aaPredicted RBP11.03□□□□□ -0.64
SPIDR-215ENST00000521798 RAPGEF2Q9Y4G8 1499 aa11.03□□□□□ -0.64
SPIDR-215ENST00000521798 LZTS3O60299 673 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-215ENST00000521798 RASA1P20936 1047 aa11.02□□□□□ -0.65
SPIDR-215ENST00000521798 NCOA4Q13772 614 aa11.02□□□□□ -0.65
SPIDR-215ENST00000521798 SCUBE2Q9NQ36 999 aa11.02□□□□□ -0.65
SPIDR-215ENST00000521798 KIAA1522Q9P206 1035 aaPredicted RBP11.02□□□□□ -0.65
SPIDR-215ENST00000521798 KIAA0586Q9BVV6 1533 aa11.02□□□□□ -0.65
SPIDR-215ENST00000521798 ERCC6L2Q5T890 1561 aa11.02□□□□□ -0.65
SPIDR-215ENST00000521798 PRXQ9BXM0 1461 aa11.01□□□□□ -0.65
SPIDR-215ENST00000521798 ATP2B4P23634 1241 aa11.01□□□□□ -0.65
SPIDR-215ENST00000521798 SLFNL1Q499Z3 407 aa11.01□□□□□ -0.65
SPIDR-215ENST00000521798 NOM1Q5C9Z4 860 aaKnown RBP11.01□□□□□ -0.65
SPIDR-215ENST00000521798 CYB5RLQ6IPT4 315 aa11.01□□□□□ -0.65
SPIDR-215ENST00000521798 RNF19BQ6ZMZ0 732 aa11.01□□□□□ -0.65
SPIDR-215ENST00000521798 ANKMY2Q8IV38 441 aa11.01□□□□□ -0.65
SPIDR-215ENST00000521798 MRRFQ96E11 262 aaKnown RBP11.01□□□□□ -0.65
SPIDR-215ENST00000521798 USB1Q9BQ65 265 aaKnown RBP11.01□□□□□ -0.65
SPIDR-215ENST00000521798 ARHGAP33O14559 1287 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 SNPHO15079 494 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 SERPINB4P48594 390 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 SWI5Q1ZZU3 235 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 SIRT1Q96EB6 747 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 MAP10Q9P2G4 905 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 CEP126Q9P2H0 1117 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 USP35Q9P2H5 1018 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 GPSM3Q9Y4H4 160 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 EEA1Q15075 1411 aa11□□□□□ -0.65
SPIDR-215ENST00000521798 ZNF16P17020 682 aaPredicted RBP10.99□□□□□ -0.65
SPIDR-215ENST00000521798 MCCD1P59942 119 aaPredicted RBP10.99□□□□□ -0.65
SPIDR-215ENST00000521798 PTPRNQ16849 979 aa10.99□□□□□ -0.65
SPIDR-215ENST00000521798 BLOC1S3Q6QNY0 202 aa10.99□□□□□ -0.65
SPIDR-215ENST00000521798 RNF135Q8IUD6 432 aa10.99□□□□□ -0.65
SPIDR-215ENST00000521798 PLPP7Q8NBV4 271 aa10.99□□□□□ -0.65
SPIDR-215ENST00000521798 SALL2Q9Y467 1007 aaPredicted RBP10.99□□□□□ -0.65
SPIDR-215ENST00000521798 PRG4Q92954 1404 aaPredicted RBP10.99□□□□□ -0.65
SPIDR-215ENST00000521798 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
SPIDR-215ENST00000521798 MARSP56192 900 aaKnown RBP10.97□□□□□ -0.65
SPIDR-215ENST00000521798 DMRTA1Q5VZB9 504 aa10.97□□□□□ -0.65
SPIDR-215ENST00000521798 C1orf216Q8TAB5 229 aa10.97□□□□□ -0.65
SPIDR-215ENST00000521798 BCL2L13Q9BXK5 485 aa10.97□□□□□ -0.65
SPIDR-215ENST00000521798 NBPF3Q9H094 633 aa10.97□□□□□ -0.65
SPIDR-215ENST00000521798 VPS9D1Q9Y2B5 631 aa10.97□□□□□ -0.65
SPIDR-215ENST00000521798 JUNDP17535 347 aa10.96□□□□□ -0.65
SPIDR-215ENST00000521798 BRICD5Q6PL45 260 aa10.96□□□□□ -0.65
SPIDR-215ENST00000521798 POTEEQ6S8J3 1075 aa10.96□□□□□ -0.65
SPIDR-215ENST00000521798 MAMSTRQ6ZN01 415 aa10.96□□□□□ -0.65
SPIDR-215ENST00000521798 PRR14Q9BWN1 585 aa10.96□□□□□ -0.65
SPIDR-215ENST00000521798 CHIC2Q9UKJ5 165 aa10.96□□□□□ -0.65
SPIDR-215ENST00000521798 IQGAP2Q13576 1575 aa10.95□□□□□ -0.66
SPIDR-215ENST00000521798 POTEB2H3BUK9 544 aa10.95□□□□□ -0.66
SPIDR-215ENST00000521798 PTK2Q05397 1052 aa10.95□□□□□ -0.66
SPIDR-215ENST00000521798 DPYDQ12882 1025 aa10.95□□□□□ -0.66
SPIDR-215ENST00000521798 MAP7D1Q3KQU3 841 aa10.95□□□□□ -0.66
SPIDR-215ENST00000521798 PDXDC2PQ6P474 469 aa10.95□□□□□ -0.66
SPIDR-215ENST00000521798 FAM9AQ8IZU1 332 aaPredicted RBP10.95□□□□□ -0.66
SPIDR-215ENST00000521798 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.66
SPIDR-215ENST00000521798 EML3Q32P44 896 aa10.94□□□□□ -0.66
SPIDR-215ENST00000521798 OGFOD1Q8N543 542 aa10.94□□□□□ -0.66
SPIDR-215ENST00000521798 ZFRQ96KR1 1074 aaKnown RBP10.94□□□□□ -0.66
SPIDR-215ENST00000521798 PCDHB9Q9Y5E1 797 aa10.94□□□□□ -0.66
SPIDR-215ENST00000521798 CTHP32929 405 aa10.93□□□□□ -0.66
SPIDR-215ENST00000521798 KCNH2Q12809 1159 aa10.93□□□□□ -0.66
SPIDR-215ENST00000521798 TRIM50Q86XT4 487 aa10.93□□□□□ -0.66
SPIDR-215ENST00000521798 OCSTAMPQ9BR26 566 aa10.93□□□□□ -0.66
SPIDR-215ENST00000521798 BIN2Q9UBW5 565 aaPredicted RBP10.93□□□□□ -0.66
SPIDR-215ENST00000521798 CLDN10P78369 228 aa10.92□□□□□ -0.66
SPIDR-215ENST00000521798 TRAF7Q6Q0C0 670 aa10.92□□□□□ -0.66
SPIDR-215ENST00000521798 NPAS4Q8IUM7 802 aa10.92□□□□□ -0.66
SPIDR-215ENST00000521798 ARMC2Q8NEN0 867 aa10.92□□□□□ -0.66
SPIDR-215ENST00000521798 GIPC2Q8TF65 315 aa10.92□□□□□ -0.66
SPIDR-215ENST00000521798 THAP11Q96EK4 314 aa10.92□□□□□ -0.66
SPIDR-215ENST00000521798 FMNL1O95466 1100 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-215ENST00000521798 ATP1A2P50993 1020 aa10.91□□□□□ -0.66
SPIDR-215ENST00000521798 LRCH3Q96II8 777 aa10.91□□□□□ -0.66
SPIDR-215ENST00000521798 ZNF594Q96JF6 807 aaPredicted RBP10.91□□□□□ -0.66
SPIDR-215ENST00000521798 DNAAF2Q9NVR5 837 aaKnown RBP10.91□□□□□ -0.66
SPIDR-215ENST00000521798 DISP1Q96F81 1524 aa10.9□□□□□ -0.66
SPIDR-215ENST00000521798 UGGT2Q9NYU1 1516 aa10.9□□□□□ -0.66
SPIDR-215ENST00000521798 ANKRD33BA6NCL7 494 aa10.9□□□□□ -0.66
SPIDR-215ENST00000521798 BHMG1C9JSJ3 638 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-215ENST00000521798 SCNN1AP37088 669 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms