RNA–Protein interactions for RNA: ENST00000521723.1

PDGFRB-209, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 5

Gene PDGFRB, Length 400 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-209ENST00000521723 CGNL1Q0VF96 1302 aa15.01□□□□□ -0.01
PDGFRB-209ENST00000521723 EVA1CP58658 441 aa15.01□□□□□ -0.01
PDGFRB-209ENST00000521723 PANK3Q9H999 370 aa15.01□□□□□ -0.01
PDGFRB-209ENST00000521723 CCDC7Q96M83 1385 aa15□□□□□ -0.01
PDGFRB-209ENST00000521723 AXIN2Q9Y2T1 843 aa15□□□□□ -0.01
PDGFRB-209ENST00000521723 SPATA31A1Q5TZJ5 1347 aa14.99□□□□□ -0.01
PDGFRB-209ENST00000521723 ONECUT3O60422 494 aaPredicted RBP14.99□□□□□ -0.01
PDGFRB-209ENST00000521723 LARP1Q6PKG0 1096 aaKnown RBP14.99□□□□□ -0.01
PDGFRB-209ENST00000521723 WASHC2AQ641Q2 1341 aa14.98□□□□□ -0.01
PDGFRB-209ENST00000521723 CRB1P82279 1406 aa14.98□□□□□ -0.01
PDGFRB-209ENST00000521723 RGPD5Q99666 1765 aa14.98□□□□□ -0.01
PDGFRB-209ENST00000521723 WDR17Q8IZU2 1322 aa14.97□□□□□ -0.01
PDGFRB-209ENST00000521723 ANKRD26Q9UPS8 1709 aa14.97□□□□□ -0.01
PDGFRB-209ENST00000521723 THSD7AQ9UPZ6 1657 aa14.97□□□□□ -0.01
PDGFRB-209ENST00000521723 MAP3K19Q56UN5 1328 aa14.96□□□□□ -0.01
PDGFRB-209ENST00000521723 ZEB1P37275 1124 aaPredicted RBP14.96□□□□□ -0.01
PDGFRB-209ENST00000521723 BLMP54132 1417 aaPredicted RBP14.96□□□□□ -0.01
PDGFRB-209ENST00000521723 FAM98CQ17RN3 349 aaKnown RBP14.96□□□□□ -0.01
PDGFRB-209ENST00000521723 SEPT12Q8IYM1 358 aa14.96□□□□□ -0.01
PDGFRB-209ENST00000521723 RTL1A6NKG5 1358 aa14.96□□□□□ -0.02
PDGFRB-209ENST00000521723 NSD2O96028 1365 aa14.96□□□□□ -0.02
PDGFRB-209ENST00000521723 BARGINQ6ZT62 677 aa14.95□□□□□ -0.02
PDGFRB-209ENST00000521723 TCP11L2Q8N4U5 519 aa14.95□□□□□ -0.02
PDGFRB-209ENST00000521723 IP6K1Q92551 441 aa14.95□□□□□ -0.02
PDGFRB-209ENST00000521723 THRAP3Q9Y2W1 955 aaKnown RBP14.95□□□□□ -0.02
PDGFRB-209ENST00000521723 ERBB3P21860 1342 aa14.94□□□□□ -0.02
PDGFRB-209ENST00000521723 BRWD3Q6RI45 1802 aa14.94□□□□□ -0.02
PDGFRB-209ENST00000521723 CSB-PGBD3P0DP91 1061 aa14.94□□□□□ -0.02
PDGFRB-209ENST00000521723 FBLN1P23142 703 aa14.94□□□□□ -0.02
PDGFRB-209ENST00000521723 TOM1L2Q6ZVM7 507 aa14.94□□□□□ -0.02
PDGFRB-209ENST00000521723 USP35Q9P2H5 1018 aa14.94□□□□□ -0.02
PDGFRB-209ENST00000521723 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
PDGFRB-209ENST00000521723 A0A0G2JS52 829 aa14.93□□□□□ -0.02
PDGFRB-209ENST00000521723 HOXC9P31274 260 aa14.93□□□□□ -0.02
PDGFRB-209ENST00000521723 AMPHP49418 695 aa14.93□□□□□ -0.02
PDGFRB-209ENST00000521723 MYT1Q01538 1121 aa14.93□□□□□ -0.02
PDGFRB-209ENST00000521723 RRS1Q15050 365 aaKnown RBP14.93□□□□□ -0.02
PDGFRB-209ENST00000521723 KIF24Q5T7B8 1368 aa14.93□□□□□ -0.02
PDGFRB-209ENST00000521723 CARD10Q9BWT7 1032 aa14.92□□□□□ -0.02
PDGFRB-209ENST00000521723 ANKRD24Q8TF21 1146 aa14.91□□□□□ -0.02
PDGFRB-209ENST00000521723 PEAK1Q9H792 1746 aa14.91□□□□□ -0.02
PDGFRB-209ENST00000521723 FAM208AQ9UK61 1670 aaKnown RBP14.9□□□□□ -0.02
PDGFRB-209ENST00000521723 WNK3Q9BYP7 1800 aa14.9□□□□□ -0.02
PDGFRB-209ENST00000521723 FLT4P35916 1363 aa14.9□□□□□ -0.02
PDGFRB-209ENST00000521723 PER1O15534 1290 aaPredicted RBP14.9□□□□□ -0.02
PDGFRB-209ENST00000521723 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
PDGFRB-209ENST00000521723 KRT27Q7Z3Y8 459 aa14.9□□□□□ -0.02
PDGFRB-209ENST00000521723 PARP4Q9UKK3 1724 aaKnown RBP14.89□□□□□ -0.03
PDGFRB-209ENST00000521723 INSRP06213 1382 aa14.88□□□□□ -0.03
PDGFRB-209ENST00000521723 MORC1Q86VD1 984 aa14.88□□□□□ -0.03
PDGFRB-209ENST00000521723 UPF1Q92900 1129 aaKnown RBP eCLIP14.88□□□□□ -0.03
PDGFRB-209ENST00000521723 CDCA7Q9BWT1 371 aaPredicted RBP14.88□□□□□ -0.03
PDGFRB-209ENST00000521723 NLRP2Q9NX02 1062 aa14.88□□□□□ -0.03
PDGFRB-209ENST00000521723 EMILIN1Q9Y6C2 1016 aa14.88□□□□□ -0.03
PDGFRB-209ENST00000521723 DISP2A7MBM2 1401 aa14.88□□□□□ -0.03
PDGFRB-209ENST00000521723 MAP2P11137 1827 aaKnown RBP14.87□□□□□ -0.03
PDGFRB-209ENST00000521723 NPC1L1Q9UHC9 1359 aa14.87□□□□□ -0.03
PDGFRB-209ENST00000521723 SMG6Q86US8 1419 aaKnown RBP14.87□□□□□ -0.03
PDGFRB-209ENST00000521723 LTV1Q96GA3 475 aaPredicted RBP14.87□□□□□ -0.03
PDGFRB-209ENST00000521723 POLKQ9UBT6 870 aa14.87□□□□□ -0.03
PDGFRB-209ENST00000521723 LRRC37A3O60309 1634 aa14.86□□□□□ -0.03
PDGFRB-209ENST00000521723 TNNT2P45379 298 aaPredicted RBP14.86□□□□□ -0.03
PDGFRB-209ENST00000521723 HSP90AB2PQ58FF8 381 aa14.86□□□□□ -0.03
PDGFRB-209ENST00000521723 PPM1GO15355 546 aaPredicted RBP14.84□□□□□ -0.03
PDGFRB-209ENST00000521723 PDE3BQ13370 1112 aa14.83□□□□□ -0.04
PDGFRB-209ENST00000521723 DDB1Q16531 1140 aa14.83□□□□□ -0.04
PDGFRB-209ENST00000521723 RGPD2P0DJD1 1756 aa14.83□□□□□ -0.04
PDGFRB-209ENST00000521723 IL2RBP14784 551 aa14.82□□□□□ -0.04
PDGFRB-209ENST00000521723 CC2D1BQ5T0F9 858 aaKnown RBP14.82□□□□□ -0.04
PDGFRB-209ENST00000521723 CCDC125Q86Z20 511 aa14.82□□□□□ -0.04
PDGFRB-209ENST00000521723 TNS2Q63HR2 1409 aa14.82□□□□□ -0.04
PDGFRB-209ENST00000521723 FAM182BQ5T319 152 aa14.81□□□□□ -0.04
PDGFRB-209ENST00000521723 NBPF6Q5VWK0 638 aa14.81□□□□□ -0.04
PDGFRB-209ENST00000521723 NBPF4Q96M43 638 aa14.81□□□□□ -0.04
PDGFRB-209ENST00000521723 FAM196AQ6ZSG2 479 aa14.8□□□□□ -0.04
PDGFRB-209ENST00000521723 OVOS2A0A0G2JMS6 1433 aa14.79□□□□□ -0.04
PDGFRB-209ENST00000521723 EXOC5O00471 708 aa14.79□□□□□ -0.04
PDGFRB-209ENST00000521723 NCAPD2Q15021 1401 aa14.79□□□□□ -0.04
PDGFRB-209ENST00000521723 EIF4A2Q14240 407 aaKnown RBP14.78□□□□□ -0.04
PDGFRB-209ENST00000521723 USHBP1Q8N6Y0 703 aa14.78□□□□□ -0.04
PDGFRB-209ENST00000521723 RGPD1P0DJD0 1748 aa14.78□□□□□ -0.04
PDGFRB-209ENST00000521723 MEGF6O75095 1541 aa14.77□□□□□ -0.04
PDGFRB-209ENST00000521723 BCL9O00512 1426 aa14.77□□□□□ -0.04
PDGFRB-209ENST00000521723 MARCH10Q8NA82 808 aaPredicted RBP14.77□□□□□ -0.05
PDGFRB-209ENST00000521723 EP400Q96L91 3159 aa14.77□□□□□ -0.05
PDGFRB-209ENST00000521723 SF3B2Q13435 895 aaKnown RBP14.76□□□□□ -0.05
PDGFRB-209ENST00000521723 EYA1Q99502 592 aa14.76□□□□□ -0.05
PDGFRB-209ENST00000521723 MTHFSP49914 203 aa14.75□□□□□ -0.05
PDGFRB-209ENST00000521723 CNGB1Q14028 1251 aaPredicted RBP14.75□□□□□ -0.05
PDGFRB-209ENST00000521723 RAPGEF4Q8WZA2 1011 aa14.75□□□□□ -0.05
PDGFRB-209ENST00000521723 TNS1Q9HBL0 1735 aaKnown RBP14.75□□□□□ -0.05
PDGFRB-209ENST00000521723 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
PDGFRB-209ENST00000521723 SHANK3Q9BYB0 1731 aa14.73□□□□□ -0.05
PDGFRB-209ENST00000521723 TRIM37O94972 964 aa14.73□□□□□ -0.05
PDGFRB-209ENST00000521723 TATP17735 454 aaPredicted RBP14.73□□□□□ -0.05
PDGFRB-209ENST00000521723 DDX10Q13206 875 aaKnown RBP14.73□□□□□ -0.05
PDGFRB-209ENST00000521723 ZCRB1Q8TBF4 217 aaKnown RBP14.73□□□□□ -0.05
PDGFRB-209ENST00000521723 SBF2Q86WG5 1849 aa14.73□□□□□ -0.05
PDGFRB-209ENST00000521723 PLEKHG2Q9H7P9 1386 aa14.72□□□□□ -0.05
PDGFRB-209ENST00000521723 IL13P35225 146 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms