RNA–Protein interactions for RNA: ENST00000520994.1

MCM4-211, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 522 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-211ENST00000520994 SEPT12Q8IYM1 358 aa28.69■■■□□ 2.18
MCM4-211ENST00000520994 CRB1P82279 1406 aa28.69■■■□□ 2.18
MCM4-211ENST00000520994 NSD3Q9BZ95 1437 aa28.68■■■□□ 2.18
MCM4-211ENST00000520994 AXIN2Q9Y2T1 843 aa28.67■■■□□ 2.18
MCM4-211ENST00000520994 RGPD5Q99666 1765 aa28.67■■■□□ 2.18
MCM4-211ENST00000520994 WDR17Q8IZU2 1322 aa28.67■■■□□ 2.18
MCM4-211ENST00000520994 C11orf95C9JLR9 678 aaPredicted RBP28.66■■■□□ 2.18
MCM4-211ENST00000520994 LARP1Q6PKG0 1096 aaKnown RBP28.66■■■□□ 2.18
MCM4-211ENST00000520994 FAM98CQ17RN3 349 aaKnown RBP28.65■■■□□ 2.18
MCM4-211ENST00000520994 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.18
MCM4-211ENST00000520994 TCP11L2Q8N4U5 519 aa28.64■■■□□ 2.18
MCM4-211ENST00000520994 BLMP54132 1417 aaPredicted RBP28.63■■■□□ 2.17
MCM4-211ENST00000520994 SOX12O15370 315 aa28.63■■■□□ 2.17
MCM4-211ENST00000520994 EP400Q96L91 3159 aa28.63■■■□□ 2.17
MCM4-211ENST00000520994 CGNL1Q0VF96 1302 aa28.63■■■□□ 2.17
MCM4-211ENST00000520994 ZBTB7CA1YPR0 619 aa28.61■■■□□ 2.17
MCM4-211ENST00000520994 GGNBP2Q9H3C7 697 aa28.61■■■□□ 2.17
MCM4-211ENST00000520994 KIF7Q2M1P5 1343 aa28.61■■■□□ 2.17
MCM4-211ENST00000520994 IP6K1Q92551 441 aa28.6■■■□□ 2.17
MCM4-211ENST00000520994 POLR3GLQ9BT43 218 aa28.6■■■□□ 2.17
MCM4-211ENST00000520994 KIF24Q5T7B8 1368 aa28.6■■■□□ 2.17
MCM4-211ENST00000520994 KRT27Q7Z3Y8 459 aa28.59■■■□□ 2.17
MCM4-211ENST00000520994 RTL1A6NKG5 1358 aa28.59■■■□□ 2.17
MCM4-211ENST00000520994 PARP4Q9UKK3 1724 aaKnown RBP28.58■■■□□ 2.17
MCM4-211ENST00000520994 ANKRD26Q9UPS8 1709 aa28.58■■■□□ 2.17
MCM4-211ENST00000520994 CCDC125Q86Z20 511 aa28.58■■■□□ 2.17
MCM4-211ENST00000520994 CARD10Q9BWT7 1032 aa28.58■■■□□ 2.17
MCM4-211ENST00000520994 PANK3Q9H999 370 aa28.58■■■□□ 2.17
MCM4-211ENST00000520994 ERBB3P21860 1342 aa28.58■■■□□ 2.17
MCM4-211ENST00000520994 TOM1L2Q6ZVM7 507 aa28.57■■■□□ 2.16
MCM4-211ENST00000520994 NSD2O96028 1365 aa28.57■■■□□ 2.16
MCM4-211ENST00000520994 FAM208AQ9UK61 1670 aaKnown RBP28.57■■■□□ 2.16
MCM4-211ENST00000520994 MAP3K19Q56UN5 1328 aa28.56■■■□□ 2.16
MCM4-211ENST00000520994 CCDC7Q96M83 1385 aa28.56■■■□□ 2.16
MCM4-211ENST00000520994 CDCA7Q9BWT1 371 aaPredicted RBP28.56■■■□□ 2.16
MCM4-211ENST00000520994 WNK3Q9BYP7 1800 aa28.55■■■□□ 2.16
MCM4-211ENST00000520994 USP35Q9P2H5 1018 aa28.53■■■□□ 2.16
MCM4-211ENST00000520994 A0A0G2JS52 829 aa28.52■■■□□ 2.16
MCM4-211ENST00000520994 MYT1Q01538 1121 aa28.52■■■□□ 2.16
MCM4-211ENST00000520994 CSB-PGBD3P0DP91 1061 aa28.51■■■□□ 2.15
MCM4-211ENST00000520994 HOXC9P31274 260 aa28.51■■■□□ 2.15
MCM4-211ENST00000520994 AMPHP49418 695 aa28.49■■■□□ 2.15
MCM4-211ENST00000520994 ANKRD24Q8TF21 1146 aa28.49■■■□□ 2.15
MCM4-211ENST00000520994 DISP2A7MBM2 1401 aa28.49■■■□□ 2.15
MCM4-211ENST00000520994 MAP2P11137 1827 aaKnown RBP28.47■■■□□ 2.15
MCM4-211ENST00000520994 FLT4P35916 1363 aa28.47■■■□□ 2.15
MCM4-211ENST00000520994 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
MCM4-211ENST00000520994 KNSTRNQ9Y448 316 aa28.46■■■□□ 2.15
MCM4-211ENST00000520994 FBLN1P23142 703 aa28.45■■■□□ 2.14
MCM4-211ENST00000520994 INSRP06213 1382 aa28.45■■■□□ 2.14
MCM4-211ENST00000520994 LRRC37A3O60309 1634 aa28.44■■■□□ 2.14
MCM4-211ENST00000520994 PDE3BQ13370 1112 aa28.44■■■□□ 2.14
MCM4-211ENST00000520994 RRS1Q15050 365 aaKnown RBP28.44■■■□□ 2.14
MCM4-211ENST00000520994 PER1O15534 1290 aaPredicted RBP28.43■■■□□ 2.14
MCM4-211ENST00000520994 PEAK1Q9H792 1746 aa28.43■■■□□ 2.14
MCM4-211ENST00000520994 FAM196AQ6ZSG2 479 aa28.42■■■□□ 2.14
MCM4-211ENST00000520994 DDB1Q16531 1140 aa28.41■■■□□ 2.14
MCM4-211ENST00000520994 NLRP2Q9NX02 1062 aa28.41■■■□□ 2.14
MCM4-211ENST00000520994 AMER1Q5JTC6 1135 aaPredicted RBP28.4■■■□□ 2.14
MCM4-211ENST00000520994 SMG6Q86US8 1419 aaKnown RBP28.4■■■□□ 2.14
MCM4-211ENST00000520994 NPC1L1Q9UHC9 1359 aa28.39■■■□□ 2.14
MCM4-211ENST00000520994 BCL9O00512 1426 aa28.39■■■□□ 2.14
MCM4-211ENST00000520994 RGPD1P0DJD0 1748 aa28.39■■■□□ 2.14
MCM4-211ENST00000520994 IL2RBP14784 551 aa28.37■■■□□ 2.13
MCM4-211ENST00000520994 POLKQ9UBT6 870 aa28.37■■■□□ 2.13
MCM4-211ENST00000520994 HSP90AB2PQ58FF8 381 aa28.36■■■□□ 2.13
MCM4-211ENST00000520994 EMILIN1Q9Y6C2 1016 aa28.36■■■□□ 2.13
MCM4-211ENST00000520994 OVOS2A0A0G2JMS6 1433 aa28.35■■■□□ 2.13
MCM4-211ENST00000520994 TNS2Q63HR2 1409 aa28.35■■■□□ 2.13
MCM4-211ENST00000520994 RGPD2P0DJD1 1756 aa28.34■■■□□ 2.13
MCM4-211ENST00000520994 EXOC5O00471 708 aa28.34■■■□□ 2.13
MCM4-211ENST00000520994 ZEB1P37275 1124 aaPredicted RBP28.34■■■□□ 2.13
MCM4-211ENST00000520994 SF3B2Q13435 895 aaKnown RBP28.34■■■□□ 2.13
MCM4-211ENST00000520994 MORC1Q86VD1 984 aa28.33■■■□□ 2.13
MCM4-211ENST00000520994 LTV1Q96GA3 475 aaPredicted RBP28.32■■■□□ 2.12
MCM4-211ENST00000520994 NCAPD2Q15021 1401 aa28.31■■■□□ 2.12
MCM4-211ENST00000520994 TNS1Q9HBL0 1735 aaKnown RBP28.31■■■□□ 2.12
MCM4-211ENST00000520994 FAM182BQ5T319 152 aa28.3■■■□□ 2.12
MCM4-211ENST00000520994 SBF2Q86WG5 1849 aa28.29■■■□□ 2.12
MCM4-211ENST00000520994 NBPF6Q5VWK0 638 aa28.29■■■□□ 2.12
MCM4-211ENST00000520994 NBPF4Q96M43 638 aa28.29■■■□□ 2.12
MCM4-211ENST00000520994 MARCH10Q8NA82 808 aaPredicted RBP28.27■■■□□ 2.12
MCM4-211ENST00000520994 BAG6P46379 1132 aa28.26■■■□□ 2.11
MCM4-211ENST00000520994 PLEKHG2Q9H7P9 1386 aa28.25■■■□□ 2.11
MCM4-211ENST00000520994 PPM1GO15355 546 aaPredicted RBP28.24■■■□□ 2.11
MCM4-211ENST00000520994 TNNT2P45379 298 aaPredicted RBP28.23■■■□□ 2.11
MCM4-211ENST00000520994 PARD3Q8TEW0 1356 aa28.22■■■□□ 2.11
MCM4-211ENST00000520994 TRIM37O94972 964 aa28.21■■■□□ 2.11
MCM4-211ENST00000520994 MEGF6O75095 1541 aa28.2■■■□□ 2.1
MCM4-211ENST00000520994 RAPGEF4Q8WZA2 1011 aa28.2■■■□□ 2.1
MCM4-211ENST00000520994 RGPD3A6NKT7 1758 aaPredicted RBP28.19■■■□□ 2.1
MCM4-211ENST00000520994 RGPD4Q7Z3J3 1758 aa28.19■■■□□ 2.1
MCM4-211ENST00000520994 DEFB132Q7Z7B7 95 aa28.19■■■□□ 2.1
MCM4-211ENST00000520994 SHANK3Q9BYB0 1731 aa28.18■■■□□ 2.1
MCM4-211ENST00000520994 EIF4A2Q14240 407 aaKnown RBP28.18■■■□□ 2.1
MCM4-211ENST00000520994 BCL11BQ9C0K0 894 aaPredicted RBP28.18■■■□□ 2.1
MCM4-211ENST00000520994 TATP17735 454 aaPredicted RBP28.17■■■□□ 2.1
MCM4-211ENST00000520994 ZCRB1Q8TBF4 217 aaKnown RBP28.17■■■□□ 2.1
MCM4-211ENST00000520994 EYA1Q99502 592 aa28.17■■■□□ 2.1
MCM4-211ENST00000520994 CC2D1BQ5T0F9 858 aaKnown RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms