RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
CLK4-208ENST00000520957 RXRBP28702 533 aa16.91■□□□□ 0.3
CLK4-208ENST00000520957 AMPHP49418 695 aa16.91■□□□□ 0.3
CLK4-208ENST00000520957 IP6K1Q92551 441 aa16.91■□□□□ 0.3
CLK4-208ENST00000520957 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
CLK4-208ENST00000520957 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
CLK4-208ENST00000520957 ATRNO75882 1429 aa16.91■□□□□ 0.3
CLK4-208ENST00000520957 HOXC9P31274 260 aa16.9■□□□□ 0.3
CLK4-208ENST00000520957 HSP90AB2PQ58FF8 381 aa16.9■□□□□ 0.3
CLK4-208ENST00000520957 LTV1Q96GA3 475 aaPredicted RBP16.9■□□□□ 0.3
CLK4-208ENST00000520957 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
CLK4-208ENST00000520957 COL14A1Q05707 1796 aaKnown RBP16.88■□□□□ 0.29
CLK4-208ENST00000520957 USP54Q70EL1 1684 aa16.88■□□□□ 0.29
CLK4-208ENST00000520957 NSD2O96028 1365 aa16.88■□□□□ 0.29
CLK4-208ENST00000520957 SPATA31A5Q5VU36 1347 aa16.88■□□□□ 0.29
CLK4-208ENST00000520957 SPATA31A7Q8IWB4 1347 aa16.88■□□□□ 0.29
CLK4-208ENST00000520957 ANKRD24Q8TF21 1146 aa16.88■□□□□ 0.29
CLK4-208ENST00000520957 COL5A2P05997 1499 aaPredicted RBP16.87■□□□□ 0.29
CLK4-208ENST00000520957 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
CLK4-208ENST00000520957 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
CLK4-208ENST00000520957 LMO7Q8WWI1 1683 aa16.87■□□□□ 0.29
CLK4-208ENST00000520957 SPATA31A1Q5TZJ5 1347 aa16.86■□□□□ 0.29
CLK4-208ENST00000520957 FAM98CQ17RN3 349 aaKnown RBP16.86■□□□□ 0.29
CLK4-208ENST00000520957 TOM1L2Q6ZVM7 507 aa16.86■□□□□ 0.29
CLK4-208ENST00000520957 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
CLK4-208ENST00000520957 COL18A1P39060 1754 aa16.86■□□□□ 0.29
CLK4-208ENST00000520957 ERBB3P21860 1342 aa16.85■□□□□ 0.29
CLK4-208ENST00000520957 NPC1L1Q9UHC9 1359 aa16.85■□□□□ 0.29
CLK4-208ENST00000520957 WDR17Q8IZU2 1322 aa16.85■□□□□ 0.29
CLK4-208ENST00000520957 NLRP2Q9NX02 1062 aa16.84■□□□□ 0.29
CLK4-208ENST00000520957 MTHFSP49914 203 aa16.83■□□□□ 0.28
CLK4-208ENST00000520957 ONECUT3O60422 494 aaPredicted RBP16.82■□□□□ 0.28
CLK4-208ENST00000520957 NRAPQ86VF7 1730 aa16.82■□□□□ 0.28
CLK4-208ENST00000520957 NWD2Q9ULI1 1742 aa16.82■□□□□ 0.28
CLK4-208ENST00000520957 GLI3P10071 1580 aa16.82■□□□□ 0.28
CLK4-208ENST00000520957 NBPF6Q5VWK0 638 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 SEPT12Q8IYM1 358 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 TCP11L2Q8N4U5 519 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 NBPF4Q96M43 638 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 CARD10Q9BWT7 1032 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 FLT4P35916 1363 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 CRB1P82279 1406 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 INSRP06213 1382 aa16.81■□□□□ 0.28
CLK4-208ENST00000520957 BLMP54132 1417 aaPredicted RBP16.8■□□□□ 0.28
CLK4-208ENST00000520957 PEAK1Q9H792 1746 aa16.8■□□□□ 0.28
CLK4-208ENST00000520957 A0A0G2JS52 829 aa16.8■□□□□ 0.28
CLK4-208ENST00000520957 MYT1Q01538 1121 aa16.8■□□□□ 0.28
CLK4-208ENST00000520957 USHBP1Q8N6Y0 703 aa16.8■□□□□ 0.28
CLK4-208ENST00000520957 RGS12O14924 1447 aa16.8■□□□□ 0.28
CLK4-208ENST00000520957 RTL1A6NKG5 1358 aa16.79■□□□□ 0.28
CLK4-208ENST00000520957 LTN1O94822 1766 aa16.79■□□□□ 0.28
CLK4-208ENST00000520957 RGPD5Q99666 1765 aa16.79■□□□□ 0.28
CLK4-208ENST00000520957 PPP2R1AP30153 589 aa16.78■□□□□ 0.28
CLK4-208ENST00000520957 EIF4A2Q14240 407 aaKnown RBP16.78■□□□□ 0.28
CLK4-208ENST00000520957 KIF24Q5T7B8 1368 aa16.78■□□□□ 0.28
CLK4-208ENST00000520957 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.78■□□□□ 0.28
CLK4-208ENST00000520957 BARGINQ6ZT62 677 aa16.78■□□□□ 0.28
CLK4-208ENST00000520957 FAM182BQ5T319 152 aa16.76■□□□□ 0.27
CLK4-208ENST00000520957 EYA1Q99502 592 aa16.76■□□□□ 0.27
CLK4-208ENST00000520957 THRAP3Q9Y2W1 955 aaKnown RBP16.76■□□□□ 0.27
CLK4-208ENST00000520957 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
CLK4-208ENST00000520957 ABCC6O95255 1503 aa16.75■□□□□ 0.27
CLK4-208ENST00000520957 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
CLK4-208ENST00000520957 SMG6Q86US8 1419 aaKnown RBP16.75■□□□□ 0.27
CLK4-208ENST00000520957 MAP2P11137 1827 aaKnown RBP16.75■□□□□ 0.27
CLK4-208ENST00000520957 IL13P35225 146 aa16.74■□□□□ 0.27
CLK4-208ENST00000520957 EP400Q96L91 3159 aa16.74■□□□□ 0.27
CLK4-208ENST00000520957 CDK12Q9NYV4 1490 aaPredicted RBP16.73■□□□□ 0.27
CLK4-208ENST00000520957 PRKRIP1Q9H875 184 aaPredicted RBP16.72■□□□□ 0.27
CLK4-208ENST00000520957 IL2RBP14784 551 aa16.71■□□□□ 0.27
CLK4-208ENST00000520957 RALBP1Q15311 655 aa16.71■□□□□ 0.27
CLK4-208ENST00000520957 KRT27Q7Z3Y8 459 aa16.71■□□□□ 0.27
CLK4-208ENST00000520957 AEBP1Q8IUX7 1158 aa16.71■□□□□ 0.27
CLK4-208ENST00000520957 DISP2A7MBM2 1401 aa16.69■□□□□ 0.26
CLK4-208ENST00000520957 DIAPH1O60610 1272 aaKnown RBP16.69■□□□□ 0.26
CLK4-208ENST00000520957 DDB1Q16531 1140 aa16.69■□□□□ 0.26
CLK4-208ENST00000520957 EXOC5O00471 708 aa16.69■□□□□ 0.26
CLK4-208ENST00000520957 PDE3BQ13370 1112 aa16.69■□□□□ 0.26
CLK4-208ENST00000520957 MARCH10Q8NA82 808 aaPredicted RBP16.68■□□□□ 0.26
CLK4-208ENST00000520957 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
CLK4-208ENST00000520957 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
CLK4-208ENST00000520957 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
CLK4-208ENST00000520957 U2SURPO15042 1029 aaKnown RBP16.66■□□□□ 0.26
CLK4-208ENST00000520957 HMOX1P09601 288 aa16.66■□□□□ 0.26
CLK4-208ENST00000520957 RAPGEF4Q8WZA2 1011 aa16.66■□□□□ 0.26
CLK4-208ENST00000520957 MEGF6O75095 1541 aa16.66■□□□□ 0.26
CLK4-208ENST00000520957 RGPD2P0DJD1 1756 aa16.66■□□□□ 0.26
CLK4-208ENST00000520957 DDX54Q8TDD1 881 aaKnown RBP16.65■□□□□ 0.26
CLK4-208ENST00000520957 THSD7AQ9UPZ6 1657 aa16.65■□□□□ 0.26
CLK4-208ENST00000520957 MYBBP1AQ9BQG0 1328 aaKnown RBP16.65■□□□□ 0.26
CLK4-208ENST00000520957 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
CLK4-208ENST00000520957 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
CLK4-208ENST00000520957 TATP17735 454 aaPredicted RBP16.64■□□□□ 0.25
CLK4-208ENST00000520957 ZCRB1Q8TBF4 217 aaKnown RBP16.64■□□□□ 0.25
CLK4-208ENST00000520957 CCDC184Q52MB2 194 aa16.63■□□□□ 0.25
CLK4-208ENST00000520957 NCAPD2Q15021 1401 aa16.63■□□□□ 0.25
CLK4-208ENST00000520957 FAM208AQ9UK61 1670 aaKnown RBP16.63■□□□□ 0.25
CLK4-208ENST00000520957 PTF1AQ7RTS3 328 aa16.62■□□□□ 0.25
CLK4-208ENST00000520957 BRWD3Q6RI45 1802 aa16.61■□□□□ 0.25
CLK4-208ENST00000520957 SOCS7O14512 581 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms