RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 CD163L1Q9NR16 1453 aa25.26■■□□□ 1.63
VEGFA-222ENST00000520948 NLRP6P59044 892 aa25.25■■□□□ 1.63
VEGFA-222ENST00000520948 ZNF692Q9BU19 519 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-222ENST00000520948 SLIT3O75094 1523 aa25.25■■□□□ 1.63
VEGFA-222ENST00000520948 AKAP12Q02952 1782 aa25.25■■□□□ 1.63
VEGFA-222ENST00000520948 BRD4O60885 1362 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-222ENST00000520948 NINLQ9Y2I6 1382 aa25.24■■□□□ 1.63
VEGFA-222ENST00000520948 PARD3Q8TEW0 1356 aa25.23■■□□□ 1.63
VEGFA-222ENST00000520948 THRAP3Q9Y2W1 955 aaKnown RBP25.23■■□□□ 1.63
VEGFA-222ENST00000520948 CRB1P82279 1406 aa25.22■■□□□ 1.63
VEGFA-222ENST00000520948 TMC1Q8TDI8 760 aa25.22■■□□□ 1.63
VEGFA-222ENST00000520948 LRRC37A3O60309 1634 aa25.21■■□□□ 1.63
VEGFA-222ENST00000520948 COL18A1P39060 1754 aa25.21■■□□□ 1.63
VEGFA-222ENST00000520948 MYOM1P52179 1685 aa25.2■■□□□ 1.63
VEGFA-222ENST00000520948 AATKQ6ZMQ8 1374 aa25.19■■□□□ 1.62
VEGFA-222ENST00000520948 WNK3Q9BYP7 1800 aa25.19■■□□□ 1.62
VEGFA-222ENST00000520948 PEAK1Q9H792 1746 aa25.19■■□□□ 1.62
VEGFA-222ENST00000520948 MON2Q7Z3U7 1717 aa25.18■■□□□ 1.62
VEGFA-222ENST00000520948 TERF2IPQ9NYB0 399 aa25.17■■□□□ 1.62
VEGFA-222ENST00000520948 RGPD5Q99666 1765 aa25.17■■□□□ 1.62
VEGFA-222ENST00000520948 A0A1W2PP64 1363 aa25.17■■□□□ 1.62
VEGFA-222ENST00000520948 KIF7Q2M1P5 1343 aa25.16■■□□□ 1.62
VEGFA-222ENST00000520948 SBF2Q86WG5 1849 aa25.16■■□□□ 1.62
VEGFA-222ENST00000520948 KTN1Q86UP2 1357 aaKnown RBP25.16■■□□□ 1.62
VEGFA-222ENST00000520948 OVOS2A0A0G2JMS6 1433 aa25.15■■□□□ 1.62
VEGFA-222ENST00000520948 OVOS2A0A0J9YW53 1432 aa25.15■■□□□ 1.62
VEGFA-222ENST00000520948 OVOS2Q6IE36 1432 aa25.15■■□□□ 1.62
VEGFA-222ENST00000520948 TOM1L2Q6ZVM7 507 aa25.15■■□□□ 1.62
VEGFA-222ENST00000520948 HDGFL2Q7Z4V5 671 aaPredicted RBP25.15■■□□□ 1.62
VEGFA-222ENST00000520948 ANKRD36BQ8N2N9 1353 aa25.15■■□□□ 1.62
VEGFA-222ENST00000520948 SOX12O15370 315 aa25.14■■□□□ 1.62
VEGFA-222ENST00000520948 TTC21BQ7Z4L5 1316 aa25.13■■□□□ 1.61
VEGFA-222ENST00000520948 AXIN2Q9Y2T1 843 aa25.13■■□□□ 1.61
VEGFA-222ENST00000520948 NBPF14Q5TI25 921 aa25.12■■□□□ 1.61
VEGFA-222ENST00000520948 DDB1Q16531 1140 aa25.11■■□□□ 1.61
VEGFA-222ENST00000520948 WASHC2AQ641Q2 1341 aa25.11■■□□□ 1.61
VEGFA-222ENST00000520948 WDR17Q8IZU2 1322 aa25.11■■□□□ 1.61
VEGFA-222ENST00000520948 CCDC7Q96M83 1385 aa25.1■■□□□ 1.61
VEGFA-222ENST00000520948 POLR3GLQ9BT43 218 aa25.1■■□□□ 1.61
VEGFA-222ENST00000520948 EDC4Q6P2E9 1401 aaKnown RBP25.1■■□□□ 1.61
VEGFA-222ENST00000520948 TTC21AQ8NDW8 1320 aa25.1■■□□□ 1.61
VEGFA-222ENST00000520948 RGPD3A6NKT7 1758 aaPredicted RBP25.09■■□□□ 1.61
VEGFA-222ENST00000520948 RGPD4Q7Z3J3 1758 aa25.09■■□□□ 1.61
VEGFA-222ENST00000520948 ARHGEF25Q86VW2 580 aa25.08■■□□□ 1.61
VEGFA-222ENST00000520948 CARD14Q9BXL6 1004 aa25.08■■□□□ 1.61
VEGFA-222ENST00000520948 NFAT5O94916 1531 aa25.07■■□□□ 1.6
VEGFA-222ENST00000520948 PTF1AQ7RTS3 328 aa25.07■■□□□ 1.6
VEGFA-222ENST00000520948 KCNH5Q8NCM2 988 aa25.06■■□□□ 1.6
VEGFA-222ENST00000520948 CSB-PGBD3P0DP91 1061 aa25.05■■□□□ 1.6
VEGFA-222ENST00000520948 MARCH10Q8NA82 808 aaPredicted RBP25.04■■□□□ 1.6
VEGFA-222ENST00000520948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.03■■□□□ 1.6
VEGFA-222ENST00000520948 PANK3Q9H999 370 aa25.03■■□□□ 1.6
VEGFA-222ENST00000520948 USP31Q70CQ4 1352 aa25.03■■□□□ 1.6
VEGFA-222ENST00000520948 USP54Q70EL1 1684 aa25.02■■□□□ 1.6
VEGFA-222ENST00000520948 NME9Q86XW9 330 aa25.01■■□□□ 1.59
VEGFA-222ENST00000520948 CARD10Q9BWT7 1032 aa25.01■■□□□ 1.59
VEGFA-222ENST00000520948 BCL11BQ9C0K0 894 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-222ENST00000520948 PLSCR1O15162 318 aa25■■□□□ 1.59
VEGFA-222ENST00000520948 CDCA7Q9BWT1 371 aaPredicted RBP25■■□□□ 1.59
VEGFA-222ENST00000520948 ANO8Q9HCE9 1232 aaPredicted RBP25■■□□□ 1.59
VEGFA-222ENST00000520948 LTN1O94822 1766 aa24.99■■□□□ 1.59
VEGFA-222ENST00000520948 SPON1Q9HCB6 807 aa24.99■■□□□ 1.59
VEGFA-222ENST00000520948 PPP1R1BQ9UD71 204 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-222ENST00000520948 FYB1O15117 783 aa24.98■■□□□ 1.59
VEGFA-222ENST00000520948 CASZ1Q86V15 1759 aa24.98■■□□□ 1.59
VEGFA-222ENST00000520948 ABCC6O95255 1503 aa24.97■■□□□ 1.59
VEGFA-222ENST00000520948 NSD3Q9BZ95 1437 aa24.97■■□□□ 1.59
VEGFA-222ENST00000520948 KCNQ2O43526 872 aa24.97■■□□□ 1.59
VEGFA-222ENST00000520948 BCL9O00512 1426 aa24.95■■□□□ 1.59
VEGFA-222ENST00000520948 PER1O15534 1290 aaPredicted RBP24.95■■□□□ 1.58
VEGFA-222ENST00000520948 TNS2Q63HR2 1409 aa24.95■■□□□ 1.58
VEGFA-222ENST00000520948 EXOC5O00471 708 aa24.94■■□□□ 1.58
VEGFA-222ENST00000520948 PROM2Q8N271 834 aa24.94■■□□□ 1.58
VEGFA-222ENST00000520948 PDGFDQ9GZP0 370 aaPredicted RBP24.93■■□□□ 1.58
VEGFA-222ENST00000520948 KIF20BQ96Q89 1820 aa24.92■■□□□ 1.58
VEGFA-222ENST00000520948 NHSQ6T4R5 1651 aa24.91■■□□□ 1.58
VEGFA-222ENST00000520948 GGNBP2Q9H3C7 697 aa24.9■■□□□ 1.58
VEGFA-222ENST00000520948 NLRP2Q9NX02 1062 aa24.9■■□□□ 1.58
VEGFA-222ENST00000520948 ERBB3P21860 1342 aa24.89■■□□□ 1.58
VEGFA-222ENST00000520948 CGNL1Q0VF96 1302 aa24.89■■□□□ 1.58
VEGFA-222ENST00000520948 TXNRD1Q16881 649 aa24.88■■□□□ 1.57
VEGFA-222ENST00000520948 COG3Q96JB2 828 aa24.88■■□□□ 1.57
VEGFA-222ENST00000520948 ZBTB7AO95365 584 aa24.87■■□□□ 1.57
VEGFA-222ENST00000520948 ACSBG1Q96GR2 724 aa24.87■■□□□ 1.57
VEGFA-222ENST00000520948 KNSTRNQ9Y448 316 aa24.87■■□□□ 1.57
VEGFA-222ENST00000520948 YY1P25490 414 aa24.85■■□□□ 1.57
VEGFA-222ENST00000520948 AMER1Q5JTC6 1135 aaPredicted RBP24.85■■□□□ 1.57
VEGFA-222ENST00000520948 ANKRD24Q8TF21 1146 aa24.85■■□□□ 1.57
VEGFA-222ENST00000520948 STK32BQ9NY57 414 aa24.85■■□□□ 1.57
VEGFA-222ENST00000520948 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
VEGFA-222ENST00000520948 BTAF1O14981 1849 aa24.84■■□□□ 1.57
VEGFA-222ENST00000520948 ANKRD26Q9UPS8 1709 aa24.83■■□□□ 1.57
VEGFA-222ENST00000520948 IL2RBP14784 551 aa24.83■■□□□ 1.57
VEGFA-222ENST00000520948 NSD2O96028 1365 aa24.82■■□□□ 1.56
VEGFA-222ENST00000520948 ATF5Q9Y2D1 282 aaPredicted RBP24.82■■□□□ 1.56
VEGFA-222ENST00000520948 SLC15A2Q16348 729 aa24.81■■□□□ 1.56
VEGFA-222ENST00000520948 DCAF8L1A6NGE4 600 aa24.8■■□□□ 1.56
VEGFA-222ENST00000520948 FBLN1P23142 703 aa24.8■■□□□ 1.56
VEGFA-222ENST00000520948 NPC1L1Q9UHC9 1359 aa24.8■■□□□ 1.56
VEGFA-222ENST00000520948 KAT6BQ8WYB5 2073 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms