RNA–Protein interactions for RNA: ENST00000520865.5

CTNNA1-225, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-225ENST00000520865 DIEXFQ68CQ4 756 aaKnown RBP9.61□□□□□ -0.87
CTNNA1-225ENST00000520865 PDXDC2PQ6P474 469 aa9.61□□□□□ -0.87
CTNNA1-225ENST00000520865 EIF4G3O43432 1585 aaKnown RBP9.6□□□□□ -0.87
CTNNA1-225ENST00000520865 ABCC8Q09428 1581 aa9.6□□□□□ -0.87
CTNNA1-225ENST00000520865 ZBTB7CA1YPR0 619 aa9.6□□□□□ -0.87
CTNNA1-225ENST00000520865 TMEM88BA6NKF7 163 aa9.6□□□□□ -0.87
CTNNA1-225ENST00000520865 UNC93B1Q9H1C4 597 aa9.6□□□□□ -0.87
CTNNA1-225ENST00000520865 DNMBPQ6XZF7 1577 aa9.59□□□□□ -0.87
CTNNA1-225ENST00000520865 ATG7O95352 703 aa9.59□□□□□ -0.87
CTNNA1-225ENST00000520865 SH3BP5LQ7L8J4 393 aa9.59□□□□□ -0.87
CTNNA1-225ENST00000520865 PHTF2Q8N3S3 785 aa9.59□□□□□ -0.87
CTNNA1-225ENST00000520865 CEP126Q9P2H0 1117 aa9.59□□□□□ -0.87
CTNNA1-225ENST00000520865 TSGA10IPQ3SY00 556 aa9.58□□□□□ -0.88
CTNNA1-225ENST00000520865 DEPDC4Q8N2C3 294 aa9.58□□□□□ -0.88
CTNNA1-225ENST00000520865 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
CTNNA1-225ENST00000520865 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
CTNNA1-225ENST00000520865 USP17L3A6NCW0 530 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 USP17L4A6NCW7 530 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 S1PR4O95977 384 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 SKIP12755 728 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 PTK2Q05397 1052 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 C4orf48Q5BLP8 95 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 USP17L2Q6R6M4 530 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 NYAP1Q6ZVC0 841 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 USP17L1Q7RTZ2 530 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 CDAN1Q8IWY9 1227 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 KCTD17Q8N5Z5 321 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 SLC6A16Q9GZN6 736 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 IL21Q9HBE4 155 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 ZMIZ1Q9ULJ6 1067 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 GPSM3Q9Y4H4 160 aa9.57□□□□□ -0.88
CTNNA1-225ENST00000520865 POLA1P09884 1462 aaPredicted RBP9.56□□□□□ -0.88
CTNNA1-225ENST00000520865 RAD54L2Q9Y4B4 1467 aa9.56□□□□□ -0.88
CTNNA1-225ENST00000520865 TDRD9Q8NDG6 1382 aaKnown RBP9.56□□□□□ -0.88
CTNNA1-225ENST00000520865 USP17L5A8MUK1 530 aa9.56□□□□□ -0.88
CTNNA1-225ENST00000520865 PCDHB9Q9Y5E1 797 aa9.56□□□□□ -0.88
CTNNA1-225ENST00000520865 SH3RF1Q7Z6J0 888 aa9.55□□□□□ -0.88
CTNNA1-225ENST00000520865 NFATC2IPQ8NCF5 419 aa9.55□□□□□ -0.88
CTNNA1-225ENST00000520865 ARMC2Q8NEN0 867 aa9.55□□□□□ -0.88
CTNNA1-225ENST00000520865 GPKOWQ92917 476 aaPredicted RBP eCLIP9.55□□□□□ -0.88
CTNNA1-225ENST00000520865 USTQ9Y2C2 406 aa9.55□□□□□ -0.88
CTNNA1-225ENST00000520865 TARBP1Q13395 1621 aaKnown RBP9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 CSB-PGBD3P0DP91 1061 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 NBPF14Q5TI25 921 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 POTEGQ6S5H5 508 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 PLEKHM2Q8IWE5 1019 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 STK32AQ8WU08 396 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 BAP1Q92560 729 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 FOXJ1Q92949 421 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 ARHGAP9Q9BRR9 750 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 CHIC2Q9UKJ5 165 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 SOGA1O94964 1423 aa9.54□□□□□ -0.88
CTNNA1-225ENST00000520865 CHD1O14646 1710 aa9.53□□□□□ -0.88
CTNNA1-225ENST00000520865 LINC01559Q495D7 138 aa9.53□□□□□ -0.88
CTNNA1-225ENST00000520865 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
CTNNA1-225ENST00000520865 VRTNQ9H8Y1 702 aa9.53□□□□□ -0.88
CTNNA1-225ENST00000520865 FCF1Q9Y324 198 aaKnown RBP9.53□□□□□ -0.88
CTNNA1-225ENST00000520865 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
CTNNA1-225ENST00000520865 PPEF1O14829 653 aaPredicted RBP9.52□□□□□ -0.89
CTNNA1-225ENST00000520865 NCOA4Q13772 614 aa9.52□□□□□ -0.89
CTNNA1-225ENST00000520865 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
CTNNA1-225ENST00000520865 SLAIN2Q9P270 581 aa9.52□□□□□ -0.89
CTNNA1-225ENST00000520865 TMEM164Q5U3C3 297 aa9.51□□□□□ -0.89
CTNNA1-225ENST00000520865 TRAF7Q6Q0C0 670 aa9.51□□□□□ -0.89
CTNNA1-225ENST00000520865 PLPP7Q8NBV4 271 aa9.51□□□□□ -0.89
CTNNA1-225ENST00000520865 CHMP7Q8WUX9 453 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-225ENST00000520865 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-225ENST00000520865 MAGEB6P1A0A0J9YX57 407 aa9.5□□□□□ -0.89
CTNNA1-225ENST00000520865 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
CTNNA1-225ENST00000520865 RNF135Q8IUD6 432 aa9.5□□□□□ -0.89
CTNNA1-225ENST00000520865 GZF1Q9H116 711 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-225ENST00000520865 MKRN1Q9UHC7 482 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-225ENST00000520865 SNAPC4Q5SXM2 1469 aa9.5□□□□□ -0.89
CTNNA1-225ENST00000520865 FGD5Q6ZNL6 1462 aa9.49□□□□□ -0.89
CTNNA1-225ENST00000520865 ELOAQ14241 798 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-225ENST00000520865 SLFNL1Q499Z3 407 aa9.49□□□□□ -0.89
CTNNA1-225ENST00000520865 PLA2G2CQ5R387 149 aa9.49□□□□□ -0.89
CTNNA1-225ENST00000520865 ZNF511Q8NB15 262 aa9.49□□□□□ -0.89
CTNNA1-225ENST00000520865 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-225ENST00000520865 BRD1O95696 1058 aa9.48□□□□□ -0.89
CTNNA1-225ENST00000520865 ZBTB33Q86T24 672 aa9.48□□□□□ -0.89
CTNNA1-225ENST00000520865 NOVA2Q9UNW9 492 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L15C9J2P7 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L10C9JJH3 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L13C9JLJ4 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L12C9JPN9 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L11C9JVI0 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L21D6R901 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L18D6R9N7 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L22D6RA61 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L17D6RBQ6 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L19D6RCP7 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L20D6RJB6 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 SH3BP2P78314 561 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 FAM69CQ0P6D2 419 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 USP17L24Q0WX57 530 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 PTK7Q13308 1070 aa9.47□□□□□ -0.89
CTNNA1-225ENST00000520865 CLDN10P78369 228 aa9.46□□□□□ -0.9
CTNNA1-225ENST00000520865 ERICH6BQ5W0A0 696 aa9.46□□□□□ -0.9
CTNNA1-225ENST00000520865 PHLDB3Q6NSJ2 640 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms