RNA–Protein interactions for RNA: ENST00000519768.5

CTNNA1-218, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-218ENST00000519768 LRRC7Q96NW7 1537 aa8.15□□□□□ -1.1
CTNNA1-218ENST00000519768 GGT6Q6P531 493 aa8.15□□□□□ -1.1
CTNNA1-218ENST00000519768 NUTM1Q86Y26 1132 aa8.15□□□□□ -1.1
CTNNA1-218ENST00000519768 IL27Q8NEV9 243 aa8.15□□□□□ -1.1
CTNNA1-218ENST00000519768 RSPH6AQ9H0K4 717 aa8.15□□□□□ -1.1
CTNNA1-218ENST00000519768 ATP1B4Q9UN42 357 aaPredicted RBP8.15□□□□□ -1.1
CTNNA1-218ENST00000519768 ZNF142P52746 1687 aaPredicted RBP8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 CPS1P31327 1500 aa8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 CNTLNQ9NXG0 1405 aa8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 APLP1P51693 650 aa8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 SPIRE2Q8WWL2 714 aa8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 TBC1D2Q9BYX2 928 aa8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 MYO5CQ9NQX4 1742 aa8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 CDC42BPBQ9Y5S2 1711 aa8.14□□□□□ -1.11
CTNNA1-218ENST00000519768 ATP6V1AP38606 617 aa8.13□□□□□ -1.11
CTNNA1-218ENST00000519768 GRIPAP1Q4V328 841 aa8.13□□□□□ -1.11
CTNNA1-218ENST00000519768 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-218ENST00000519768 GOPCQ9HD26 462 aa8.13□□□□□ -1.11
CTNNA1-218ENST00000519768 ARHGAP5Q13017 1502 aa8.13□□□□□ -1.11
CTNNA1-218ENST00000519768 MROH2AA6NES4 1674 aa8.12□□□□□ -1.11
CTNNA1-218ENST00000519768 GFRA3O60609 400 aa8.12□□□□□ -1.11
CTNNA1-218ENST00000519768 GJA5P36382 358 aa8.12□□□□□ -1.11
CTNNA1-218ENST00000519768 HNRNPMP52272 730 aaKnown RBP eCLIP8.12□□□□□ -1.11
CTNNA1-218ENST00000519768 FUT2Q10981 343 aa8.12□□□□□ -1.11
CTNNA1-218ENST00000519768 TMEM132AQ24JP5 1023 aa8.12□□□□□ -1.11
CTNNA1-218ENST00000519768 A2ML1A8K2U0 1454 aa8.12□□□□□ -1.11
CTNNA1-218ENST00000519768 HOXA2O43364 376 aa8.11□□□□□ -1.11
CTNNA1-218ENST00000519768 SH3D19Q5HYK7 790 aa8.11□□□□□ -1.11
CTNNA1-218ENST00000519768 MYSM1Q5VVJ2 828 aa8.11□□□□□ -1.11
CTNNA1-218ENST00000519768 ZNF787Q6DD87 383 aa8.11□□□□□ -1.11
CTNNA1-218ENST00000519768 TRIM52Q96A61 297 aa8.11□□□□□ -1.11
CTNNA1-218ENST00000519768 XIRP1Q702N8 1843 aaKnown RBP8.1□□□□□ -1.11
CTNNA1-218ENST00000519768 ITGBL1O95965 494 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-218ENST00000519768 SKIV2LQ15477 1246 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-218ENST00000519768 ANKLE2Q86XL3 938 aa8.09□□□□□ -1.11
CTNNA1-218ENST00000519768 PCDHB3Q9Y5E6 796 aa8.09□□□□□ -1.11
CTNNA1-218ENST00000519768 NPHP4O75161 1426 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-218ENST00000519768 POLR1AO95602 1720 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-218ENST00000519768 MOXD2PA6NHM9 499 aa8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 SPTLC1O15269 473 aa8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 TUSC1Q2TAM9 212 aa8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 MORN1Q5T089 497 aa8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 ZNF777Q9ULD5 760 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 LRRIQ1Q96JM4 1722 aa8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 ABCC1P33527 1531 aa8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 ITSN2Q9NZM3 1697 aa8.08□□□□□ -1.12
CTNNA1-218ENST00000519768 SAMD9LQ8IVG5 1584 aa8.07□□□□□ -1.12
CTNNA1-218ENST00000519768 RSBN1LQ6PCB5 846 aaPredicted RBP8.07□□□□□ -1.12
CTNNA1-218ENST00000519768 RIC3Q7Z5B4 369 aa8.07□□□□□ -1.12
CTNNA1-218ENST00000519768 TROQ12816 1431 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 NR1I2O75469 434 aa8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 FDX1P10109 184 aa8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 NDUFV2P19404 249 aa8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 PUS10Q3MIT2 529 aaKnown RBP8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 SALL2Q9Y467 1007 aaPredicted RBP8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 TNRQ92752 1358 aa8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 MED14O60244 1454 aa8.06□□□□□ -1.12
CTNNA1-218ENST00000519768 SPAG9O60271 1321 aaKnown RBP8.05□□□□□ -1.12
CTNNA1-218ENST00000519768 TJAP1Q5JTD0 557 aa8.05□□□□□ -1.12
CTNNA1-218ENST00000519768 BLOC1S3Q6QNY0 202 aa8.05□□□□□ -1.12
CTNNA1-218ENST00000519768 SCUBE3Q8IX30 993 aa8.05□□□□□ -1.12
CTNNA1-218ENST00000519768 POLR3EQ9NVU0 708 aa8.05□□□□□ -1.12
CTNNA1-218ENST00000519768 SLC27A5Q9Y2P5 690 aa8.05□□□□□ -1.12
CTNNA1-218ENST00000519768 LRP6O75581 1613 aa8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 LTKP29376 864 aa8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 Q3C1V9 767 aa8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 HLA-CQ95604 372 aa8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 PCMTD1Q96MG8 357 aaPredicted RBP8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 MTRQ99707 1265 aa8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 IL21Q9HBE4 155 aa8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 LIMD1Q9UGP4 676 aa8.04□□□□□ -1.12
CTNNA1-218ENST00000519768 FAM135BQ49AJ0 1406 aa8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 RNF17Q9BXT8 1623 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 PLXNC1O60486 1568 aa8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 A2MP01023 1474 aa8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 COPS2P61201 443 aa8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 PRPF38BQ5VTL8 546 aaKnown RBP8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 PCDHGC3Q9UN70 934 aa8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 ZNF644Q9H582 1327 aaPredicted RBP8.03□□□□□ -1.12
CTNNA1-218ENST00000519768 ZPR1O75312 459 aa8.02□□□□□ -1.13
CTNNA1-218ENST00000519768 GUCA2AQ02747 115 aa8.02□□□□□ -1.13
CTNNA1-218ENST00000519768 THEMISQ8N1K5 641 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-218ENST00000519768 PROCA1Q8NCQ7 364 aaPredicted RBP8.02□□□□□ -1.13
CTNNA1-218ENST00000519768 MIA2Q96PC5 1412 aa8.02□□□□□ -1.13
CTNNA1-218ENST00000519768 IQGAP1P46940 1657 aa8.02□□□□□ -1.13
CTNNA1-218ENST00000519768 SETBP1Q9Y6X0 1596 aa8.01□□□□□ -1.13
CTNNA1-218ENST00000519768 PREX2Q70Z35 1606 aa8.01□□□□□ -1.13
CTNNA1-218ENST00000519768 THAP11Q96EK4 314 aa8.01□□□□□ -1.13
CTNNA1-218ENST00000519768 PCDHB15Q9Y5E8 787 aa8.01□□□□□ -1.13
CTNNA1-218ENST00000519768 SYCP2Q9BX26 1530 aa8.01□□□□□ -1.13
CTNNA1-218ENST00000519768 ZC3H13Q5T200 1668 aaKnown RBP8.01□□□□□ -1.13
CTNNA1-218ENST00000519768 ROBO1Q9Y6N7 1651 aa8.01□□□□□ -1.13
CTNNA1-218ENST00000519768 CDC42BPAQ5VT25 1732 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 SPDYE5A6NIY4 337 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 NRG2O14511 850 aaPredicted RBP8□□□□□ -1.13
CTNNA1-218ENST00000519768 LILRB3O75022 631 aa8□□□□□ -1.13
CTNNA1-218ENST00000519768 FMNL1O95466 1100 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms