RNA–Protein interactions for RNA: ENST00000519674.1

TRPS1-209, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 3,116 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-209ENST00000519674 SPATA31D1Q6ZQQ2 1576 aa10.53□□□□□ -0.72
TRPS1-209ENST00000519674 ATAD2Q6PL18 1390 aa10.53□□□□□ -0.72
TRPS1-209ENST00000519674 ABCC11Q96J66 1382 aa10.53□□□□□ -0.72
TRPS1-209ENST00000519674 NASPP49321 788 aaPredicted RBP10.52□□□□□ -0.72
TRPS1-209ENST00000519674 TCP11L2Q8N4U5 519 aa10.52□□□□□ -0.72
TRPS1-209ENST00000519674 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.52□□□□□ -0.72
TRPS1-209ENST00000519674 RUNDC1Q96C34 613 aa10.52□□□□□ -0.72
TRPS1-209ENST00000519674 NINLQ9Y2I6 1382 aa10.52□□□□□ -0.73
TRPS1-209ENST00000519674 BCAR3O75815 825 aa10.52□□□□□ -0.73
TRPS1-209ENST00000519674 IRX5P78411 483 aaPredicted RBP10.52□□□□□ -0.73
TRPS1-209ENST00000519674 CBX1P83916 185 aa10.52□□□□□ -0.73
TRPS1-209ENST00000519674 XPCQ01831 940 aaPredicted RBP10.52□□□□□ -0.73
TRPS1-209ENST00000519674 NGEFQ8N5V2 710 aa10.52□□□□□ -0.73
TRPS1-209ENST00000519674 IBTKQ9P2D0 1353 aaPredicted RBP10.52□□□□□ -0.73
TRPS1-209ENST00000519674 ARHGEF40Q8TER5 1519 aa10.52□□□□□ -0.73
TRPS1-209ENST00000519674 CHMP4AQ9BY43 222 aa10.51□□□□□ -0.73
TRPS1-209ENST00000519674 CGNQ9P2M7 1197 aaKnown RBP10.51□□□□□ -0.73
TRPS1-209ENST00000519674 ZNF692Q9BU19 519 aaPredicted RBP10.51□□□□□ -0.73
TRPS1-209ENST00000519674 CDK19Q9BWU1 502 aa10.51□□□□□ -0.73
TRPS1-209ENST00000519674 ESF1Q9H501 851 aaKnown RBP10.51□□□□□ -0.73
TRPS1-209ENST00000519674 TERF2IPQ9NYB0 399 aa10.51□□□□□ -0.73
TRPS1-209ENST00000519674 RIMS2Q9UQ26 1411 aa10.51□□□□□ -0.73
TRPS1-209ENST00000519674 U2AF1L5P0DN76 240 aaPredicted RBP10.51□□□□□ -0.73
TRPS1-209ENST00000519674 U2AF1Q01081 240 aaKnown RBP eCLIP10.51□□□□□ -0.73
TRPS1-209ENST00000519674 ATP2B3Q16720 1220 aa10.51□□□□□ -0.73
TRPS1-209ENST00000519674 WAPLQ7Z5K2 1190 aa10.51□□□□□ -0.73
TRPS1-209ENST00000519674 ZNF710Q8N1W2 664 aa10.51□□□□□ -0.73
TRPS1-209ENST00000519674 IQSEC2Q5JU85 1478 aa10.5□□□□□ -0.73
TRPS1-209ENST00000519674 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
TRPS1-209ENST00000519674 MCM5P33992 734 aa10.5□□□□□ -0.73
TRPS1-209ENST00000519674 SKOR2Q2VWA4 1001 aaPredicted RBP10.5□□□□□ -0.73
TRPS1-209ENST00000519674 PDLIM2Q96JY6 352 aa10.5□□□□□ -0.73
TRPS1-209ENST00000519674 FYB1O15117 783 aa10.49□□□□□ -0.73
TRPS1-209ENST00000519674 MYRIPQ8NFW9 859 aa10.49□□□□□ -0.73
TRPS1-209ENST00000519674 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
TRPS1-209ENST00000519674 NCOA3Q9Y6Q9 1424 aa10.49□□□□□ -0.73
TRPS1-209ENST00000519674 DDIT3P35638 169 aa10.49□□□□□ -0.73
TRPS1-209ENST00000519674 DNAJC2Q99543 621 aaKnown RBP10.49□□□□□ -0.73
TRPS1-209ENST00000519674 ZKSCAN5Q9Y2L8 839 aa10.49□□□□□ -0.73
TRPS1-209ENST00000519674 GTF2F1P35269 517 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRPS1-209ENST00000519674 ZMYM3Q14202 1370 aa10.48□□□□□ -0.73
TRPS1-209ENST00000519674 SETD1AO15047 1707 aaKnown RBP10.48□□□□□ -0.73
TRPS1-209ENST00000519674 U2SURPO15042 1029 aaKnown RBP10.48□□□□□ -0.73
TRPS1-209ENST00000519674 MMP14P50281 582 aa10.48□□□□□ -0.73
TRPS1-209ENST00000519674 HDGFL2Q7Z4V5 671 aaPredicted RBP10.48□□□□□ -0.73
TRPS1-209ENST00000519674 MAPK8IP3Q9UPT6 1336 aa10.48□□□□□ -0.73
TRPS1-209ENST00000519674 ANKRD26Q9UPS8 1709 aa10.47□□□□□ -0.73
TRPS1-209ENST00000519674 PTMSP20962 102 aa10.47□□□□□ -0.73
TRPS1-209ENST00000519674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.47□□□□□ -0.73
TRPS1-209ENST00000519674 SPRYD3Q8NCJ5 442 aa10.47□□□□□ -0.73
TRPS1-209ENST00000519674 PHF23Q9BUL5 403 aaPredicted RBP10.47□□□□□ -0.73
TRPS1-209ENST00000519674 UPF2Q9HAU5 1272 aaKnown RBP10.46□□□□□ -0.73
TRPS1-209ENST00000519674 NRXN3Q9Y4C0 1643 aa10.46□□□□□ -0.74
TRPS1-209ENST00000519674 METP08581 1390 aa10.46□□□□□ -0.74
TRPS1-209ENST00000519674 DLC1Q96QB1 1528 aa10.46□□□□□ -0.74
TRPS1-209ENST00000519674 BCCIPQ9P287 314 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRPS1-209ENST00000519674 KIF20BQ96Q89 1820 aa10.45□□□□□ -0.74
TRPS1-209ENST00000519674 MAPK8IP2Q13387 824 aaPredicted RBP10.45□□□□□ -0.74
TRPS1-209ENST00000519674 WDR63Q8IWG1 891 aa10.45□□□□□ -0.74
TRPS1-209ENST00000519674 COL3A1P02461 1466 aaPredicted RBP10.45□□□□□ -0.74
TRPS1-209ENST00000519674 RBM25P49756 843 aaKnown RBP10.44□□□□□ -0.74
TRPS1-209ENST00000519674 TXNDC2Q86VQ3 553 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 MED14O60244 1454 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 HSP90AB1P08238 724 aaKnown RBP10.44□□□□□ -0.74
TRPS1-209ENST00000519674 FBLN1P23142 703 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 CCDC27Q2M243 656 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 BCL2L13Q9BXK5 485 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 ADGRB2O60241 1585 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.44□□□□□ -0.74
TRPS1-209ENST00000519674 PANK1Q8TE04 598 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 PRIMPOLQ96LW4 560 aa10.44□□□□□ -0.74
TRPS1-209ENST00000519674 RARSP54136 660 aaKnown RBP10.43□□□□□ -0.74
TRPS1-209ENST00000519674 TNPO1Q92973 898 aaKnown RBP10.43□□□□□ -0.74
TRPS1-209ENST00000519674 COG6Q9Y2V7 657 aa10.43□□□□□ -0.74
TRPS1-209ENST00000519674 TNRQ92752 1358 aa10.43□□□□□ -0.74
TRPS1-209ENST00000519674 TULP2O00295 520 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 HMGN5P82970 282 aaKnown RBP10.42□□□□□ -0.74
TRPS1-209ENST00000519674 SAMD1Q6SPF0 538 aaPredicted RBP10.42□□□□□ -0.74
TRPS1-209ENST00000519674 GBP4Q96PP9 640 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 PLEKHF1Q96S99 279 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 ATP7BP35670 1465 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 WASLO00401 505 aaPredicted RBP10.42□□□□□ -0.74
TRPS1-209ENST00000519674 DIAPH1O60610 1272 aaKnown RBP10.42□□□□□ -0.74
TRPS1-209ENST00000519674 KCNJ4P48050 445 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 PDE3AQ14432 1141 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 TSR2Q969E8 191 aaKnown RBP10.42□□□□□ -0.74
TRPS1-209ENST00000519674 NCKAP5LQ9HCH0 1330 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 PPIP5K1Q6PFW1 1433 aa10.42□□□□□ -0.74
TRPS1-209ENST00000519674 ZBTB7CA1YPR0 619 aa10.41□□□□□ -0.74
TRPS1-209ENST00000519674 IGHDP01880 384 aa10.41□□□□□ -0.74
TRPS1-209ENST00000519674 TMPOP42166 694 aaKnown RBP10.41□□□□□ -0.74
TRPS1-209ENST00000519674 ZNF445P59923 1031 aa10.41□□□□□ -0.74
TRPS1-209ENST00000519674 CIZ1Q9ULV3 898 aaPredicted RBP10.41□□□□□ -0.74
TRPS1-209ENST00000519674 PSEN1P49768 467 aa10.41□□□□□ -0.74
TRPS1-209ENST00000519674 YY1AP1Q9H869 796 aa10.41□□□□□ -0.74
TRPS1-209ENST00000519674 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.74
TRPS1-209ENST00000519674 JARID2Q92833 1246 aaPredicted RBP10.4□□□□□ -0.74
TRPS1-209ENST00000519674 TNNQ9UQP3 1299 aa10.4□□□□□ -0.74
TRPS1-209ENST00000519674 HDGFP51858 240 aaKnown RBP10.4□□□□□ -0.74
TRPS1-209ENST00000519674 GABPB1Q06547 395 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms