RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 AMPHP49418 695 aa19.05■□□□□ 0.64
SDC2-203ENST00000519587 ZC3H6P61129 1189 aaKnown RBP19.05■□□□□ 0.64
SDC2-203ENST00000519587 RRS1Q15050 365 aaKnown RBP19.05■□□□□ 0.64
SDC2-203ENST00000519587 ARHGEF25Q86VW2 580 aa19.05■□□□□ 0.64
SDC2-203ENST00000519587 CFAP53Q96M91 514 aa19.05■□□□□ 0.64
SDC2-203ENST00000519587 PLCH1Q4KWH8 1693 aa19.05■□□□□ 0.64
SDC2-203ENST00000519587 ZBTB7CA1YPR0 619 aa19.04■□□□□ 0.64
SDC2-203ENST00000519587 BLMP54132 1417 aaPredicted RBP19.04■□□□□ 0.64
SDC2-203ENST00000519587 POLKQ9UBT6 870 aa19.04■□□□□ 0.64
SDC2-203ENST00000519587 PPM1GO15355 546 aaPredicted RBP19.03■□□□□ 0.64
SDC2-203ENST00000519587 EMILIN1Q9Y6C2 1016 aa19.03■□□□□ 0.64
SDC2-203ENST00000519587 LMO7Q8WWI1 1683 aa19.03■□□□□ 0.64
SDC2-203ENST00000519587 FAM208AQ9UK61 1670 aaKnown RBP19.03■□□□□ 0.64
SDC2-203ENST00000519587 COL18A1P39060 1754 aa19.03■□□□□ 0.64
SDC2-203ENST00000519587 NWD2Q9ULI1 1742 aa19.03■□□□□ 0.64
SDC2-203ENST00000519587 MTHFSP49914 203 aa19.02■□□□□ 0.64
SDC2-203ENST00000519587 RBM6P78332 1123 aaKnown RBP19.01■□□□□ 0.63
SDC2-203ENST00000519587 RGPD5Q99666 1765 aa19.01■□□□□ 0.63
SDC2-203ENST00000519587 ADAMTS2O95450 1211 aa19■□□□□ 0.63
SDC2-203ENST00000519587 FBLN1P23142 703 aa19■□□□□ 0.63
SDC2-203ENST00000519587 IP6K1Q92551 441 aa19■□□□□ 0.63
SDC2-203ENST00000519587 INSRP06213 1382 aa18.99■□□□□ 0.63
SDC2-203ENST00000519587 HOXC9P31274 260 aa18.99■□□□□ 0.63
SDC2-203ENST00000519587 COL3A1P02461 1466 aaPredicted RBP18.98■□□□□ 0.63
SDC2-203ENST00000519587 QTRT2Q9H974 415 aaKnown RBP18.98■□□□□ 0.63
SDC2-203ENST00000519587 CCER2I3L3R5 266 aa18.97■□□□□ 0.63
SDC2-203ENST00000519587 CHRNA2Q15822 529 aa18.97■□□□□ 0.63
SDC2-203ENST00000519587 C8orf37Q96NL8 207 aa18.97■□□□□ 0.63
SDC2-203ENST00000519587 NRAPQ86VF7 1730 aa18.97■□□□□ 0.63
SDC2-203ENST00000519587 MIER1Q8N108 512 aa18.96■□□□□ 0.63
SDC2-203ENST00000519587 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.96■□□□□ 0.63
SDC2-203ENST00000519587 CAMTA1Q9Y6Y1 1673 aa18.95■□□□□ 0.62
SDC2-203ENST00000519587 MRS2Q9HD23 443 aa18.95■□□□□ 0.62
SDC2-203ENST00000519587 COL5A2P05997 1499 aaPredicted RBP18.95■□□□□ 0.62
SDC2-203ENST00000519587 FAM83GA6ND36 823 aa18.94■□□□□ 0.62
SDC2-203ENST00000519587 DIAPH1O60610 1272 aaKnown RBP18.94■□□□□ 0.62
SDC2-203ENST00000519587 SLIT2O94813 1529 aa18.94■□□□□ 0.62
SDC2-203ENST00000519587 HSP90AB2PQ58FF8 381 aa18.93■□□□□ 0.62
SDC2-203ENST00000519587 NGLY1Q96IV0 654 aa18.93■□□□□ 0.62
SDC2-203ENST00000519587 NUDCQ9Y266 331 aa18.93■□□□□ 0.62
SDC2-203ENST00000519587 ERBB3P21860 1342 aa18.93■□□□□ 0.62
SDC2-203ENST00000519587 RGPD1P0DJD0 1748 aa18.92■□□□□ 0.62
SDC2-203ENST00000519587 BTG4Q9NY30 223 aa18.92■□□□□ 0.62
SDC2-203ENST00000519587 CSB-PGBD3P0DP91 1061 aa18.91■□□□□ 0.62
SDC2-203ENST00000519587 ANKRD24Q8TF21 1146 aa18.91■□□□□ 0.62
SDC2-203ENST00000519587 EVA1CP58658 441 aa18.9■□□□□ 0.62
SDC2-203ENST00000519587 EIF4A2Q14240 407 aaKnown RBP18.9■□□□□ 0.62
SDC2-203ENST00000519587 WDR43Q15061 677 aaKnown RBP eCLIP18.9■□□□□ 0.62
SDC2-203ENST00000519587 LTV1Q96GA3 475 aaPredicted RBP18.9■□□□□ 0.62
SDC2-203ENST00000519587 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
SDC2-203ENST00000519587 AXIN2Q9Y2T1 843 aa18.89■□□□□ 0.61
SDC2-203ENST00000519587 WDR17Q8IZU2 1322 aa18.89■□□□□ 0.61
SDC2-203ENST00000519587 IL13P35225 146 aa18.87■□□□□ 0.61
SDC2-203ENST00000519587 CRB1P82279 1406 aa18.87■□□□□ 0.61
SDC2-203ENST00000519587 FNBP4Q8N3X1 1017 aaPredicted RBP18.87■□□□□ 0.61
SDC2-203ENST00000519587 STRN4Q9NRL3 753 aa18.87■□□□□ 0.61
SDC2-203ENST00000519587 U2SURPO15042 1029 aaKnown RBP18.86■□□□□ 0.61
SDC2-203ENST00000519587 NLRP2Q9NX02 1062 aa18.86■□□□□ 0.61
SDC2-203ENST00000519587 IGSF1Q8N6C5 1336 aa18.85■□□□□ 0.61
SDC2-203ENST00000519587 TOM1L2Q6ZVM7 507 aa18.85■□□□□ 0.61
SDC2-203ENST00000519587 UNC5CLQ8IV45 518 aa18.85■□□□□ 0.61
SDC2-203ENST00000519587 USP21Q9UK80 565 aa18.85■□□□□ 0.61
SDC2-203ENST00000519587 BCL9LQ86UU0 1499 aa18.84■□□□□ 0.61
SDC2-203ENST00000519587 WNK3Q9BYP7 1800 aa18.84■□□□□ 0.61
SDC2-203ENST00000519587 U2AF1L5P0DN76 240 aaPredicted RBP18.84■□□□□ 0.61
SDC2-203ENST00000519587 U2AF1Q01081 240 aaKnown RBP eCLIP18.84■□□□□ 0.61
SDC2-203ENST00000519587 CCDC184Q52MB2 194 aa18.84■□□□□ 0.61
SDC2-203ENST00000519587 NCAPD2Q15021 1401 aa18.83■□□□□ 0.61
SDC2-203ENST00000519587 PARP4Q9UKK3 1724 aaKnown RBP18.83■□□□□ 0.61
SDC2-203ENST00000519587 LARP1Q6PKG0 1096 aaKnown RBP18.82■□□□□ 0.6
SDC2-203ENST00000519587 PNNQ9H307 717 aaKnown RBP18.82■□□□□ 0.6
SDC2-203ENST00000519587 EP400Q96L91 3159 aa18.82■□□□□ 0.6
SDC2-203ENST00000519587 KDRP35968 1356 aa18.81■□□□□ 0.6
SDC2-203ENST00000519587 PNISRQ8TF01 805 aaKnown RBP18.81■□□□□ 0.6
SDC2-203ENST00000519587 EYA1Q99502 592 aa18.81■□□□□ 0.6
SDC2-203ENST00000519587 CARD10Q9BWT7 1032 aa18.81■□□□□ 0.6
SDC2-203ENST00000519587 TRPC5Q9UL62 973 aaPredicted RBP18.81■□□□□ 0.6
SDC2-203ENST00000519587 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
SDC2-203ENST00000519587 PLEKHG2Q9H7P9 1386 aa18.81■□□□□ 0.6
SDC2-203ENST00000519587 VPS72Q15906 364 aa18.8■□□□□ 0.6
SDC2-203ENST00000519587 NBPF6Q5VWK0 638 aa18.8■□□□□ 0.6
SDC2-203ENST00000519587 NBPF4Q96M43 638 aa18.8■□□□□ 0.6
SDC2-203ENST00000519587 NEFMP07197 916 aa18.79■□□□□ 0.6
SDC2-203ENST00000519587 CCDC125Q86Z20 511 aa18.79■□□□□ 0.6
SDC2-203ENST00000519587 ATRNO75882 1429 aa18.79■□□□□ 0.6
SDC2-203ENST00000519587 FCHSD2O94868 740 aa18.78■□□□□ 0.6
SDC2-203ENST00000519587 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
SDC2-203ENST00000519587 SPATA31A1Q5TZJ5 1347 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 SPATA31A5Q5VU36 1347 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 SPATA31A7Q8IWB4 1347 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 HMOX1P09601 288 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 FAM9BQ8IZU0 186 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 TCP11L2Q8N4U5 519 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 RAPGEF4Q8WZA2 1011 aa18.77■□□□□ 0.6
SDC2-203ENST00000519587 THRAP3Q9Y2W1 955 aaKnown RBP18.77■□□□□ 0.6
SDC2-203ENST00000519587 LRP5O75197 1615 aa18.76■□□□□ 0.59
SDC2-203ENST00000519587 MAPK8IP3Q9UPT6 1336 aa18.75■□□□□ 0.59
SDC2-203ENST00000519587 PKD1L3Q7Z443 1732 aa18.75■□□□□ 0.59
SDC2-203ENST00000519587 AEBP1Q8IUX7 1158 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms