RNA–Protein interactions for RNA: ENST00000519245.1

LAMA4-212, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-212ENST00000519245 GIGYF2Q6Y7W6 1299 aaKnown RBP10.21□□□□□ -0.77
LAMA4-212ENST00000519245 BPHLQ86WA6 291 aaPredicted RBP10.21□□□□□ -0.77
LAMA4-212ENST00000519245 BEGAINQ9BUH8 593 aa10.21□□□□□ -0.77
LAMA4-212ENST00000519245 COL25A1Q9BXS0 654 aaPredicted RBP10.21□□□□□ -0.77
LAMA4-212ENST00000519245 TBC1D2Q9BYX2 928 aa10.21□□□□□ -0.77
LAMA4-212ENST00000519245 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.78
LAMA4-212ENST00000519245 WDR62O43379 1518 aa10.21□□□□□ -0.78
LAMA4-212ENST00000519245 PER1O15534 1290 aaPredicted RBP10.2□□□□□ -0.78
LAMA4-212ENST00000519245 HRCP23327 699 aa10.2□□□□□ -0.78
LAMA4-212ENST00000519245 AMHR2Q16671 573 aa10.2□□□□□ -0.78
LAMA4-212ENST00000519245 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.2□□□□□ -0.78
LAMA4-212ENST00000519245 URB2Q14146 1524 aaKnown RBP10.19□□□□□ -0.78
LAMA4-212ENST00000519245 TTLL8A6PVC2 850 aa10.19□□□□□ -0.78
LAMA4-212ENST00000519245 NANOS1Q8WY41 292 aaKnown RBP10.19□□□□□ -0.78
LAMA4-212ENST00000519245 TSEN34Q9BSV6 310 aaKnown RBP10.19□□□□□ -0.78
LAMA4-212ENST00000519245 SH3RF1Q7Z6J0 888 aa10.18□□□□□ -0.78
LAMA4-212ENST00000519245 MAP4K5Q9Y4K4 846 aa10.18□□□□□ -0.78
LAMA4-212ENST00000519245 WHAMMQ8TF30 809 aa10.17□□□□□ -0.78
LAMA4-212ENST00000519245 ZBTB3Q9H5J0 574 aa10.17□□□□□ -0.78
LAMA4-212ENST00000519245 PRDM2Q13029 1718 aa10.16□□□□□ -0.78
LAMA4-212ENST00000519245 SLURP2P0DP57 97 aa10.16□□□□□ -0.78
LAMA4-212ENST00000519245 TRMT44Q8IYL2 757 aaKnown RBP10.16□□□□□ -0.78
LAMA4-212ENST00000519245 SVOPQ8N4V2 548 aa10.16□□□□□ -0.78
LAMA4-212ENST00000519245 CABLES1Q8TDN4 633 aa10.16□□□□□ -0.78
LAMA4-212ENST00000519245 CCDC155Q8N6L0 562 aa10.15□□□□□ -0.78
LAMA4-212ENST00000519245 DNMT3AQ9Y6K1 912 aaPredicted RBP10.15□□□□□ -0.78
LAMA4-212ENST00000519245 FIGNL2A6NMB9 653 aa10.14□□□□□ -0.79
LAMA4-212ENST00000519245 ARHGEF15O94989 841 aa10.14□□□□□ -0.79
LAMA4-212ENST00000519245 HAP1P54257 671 aaPredicted RBP10.14□□□□□ -0.79
LAMA4-212ENST00000519245 PRPF38BQ5VTL8 546 aaKnown RBP10.14□□□□□ -0.79
LAMA4-212ENST00000519245 GPAT2Q6NUI2 795 aa10.14□□□□□ -0.79
LAMA4-212ENST00000519245 VASH1Q7L8A9 365 aaPredicted RBP10.14□□□□□ -0.79
LAMA4-212ENST00000519245 SH3BP5LQ7L8J4 393 aa10.14□□□□□ -0.79
LAMA4-212ENST00000519245 CCDC116Q8IYX3 515 aa10.14□□□□□ -0.79
LAMA4-212ENST00000519245 EMILIN1Q9Y6C2 1016 aa10.14□□□□□ -0.79
LAMA4-212ENST00000519245 IRS1P35568 1242 aa10.13□□□□□ -0.79
LAMA4-212ENST00000519245 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
LAMA4-212ENST00000519245 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.12□□□□□ -0.79
LAMA4-212ENST00000519245 SLC35F4A4IF30 521 aa10.11□□□□□ -0.79
LAMA4-212ENST00000519245 SPINT1O43278 529 aa10.11□□□□□ -0.79
LAMA4-212ENST00000519245 BARGINQ6ZT62 677 aa10.11□□□□□ -0.79
LAMA4-212ENST00000519245 Q6ZVU0 165 aa10.11□□□□□ -0.79
LAMA4-212ENST00000519245 IGHA1P01876 353 aa10.1□□□□□ -0.79
LAMA4-212ENST00000519245 CBLBQ13191 982 aa10.1□□□□□ -0.79
LAMA4-212ENST00000519245 RIC3Q7Z5B4 369 aa10.1□□□□□ -0.79
LAMA4-212ENST00000519245 ARMC2Q8NEN0 867 aa10.1□□□□□ -0.79
LAMA4-212ENST00000519245 ITGA6P23229 1130 aa10.09□□□□□ -0.79
LAMA4-212ENST00000519245 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
LAMA4-212ENST00000519245 NBPF14Q5TI25 921 aa10.09□□□□□ -0.79
LAMA4-212ENST00000519245 PARP9Q8IXQ6 854 aa10.09□□□□□ -0.79
LAMA4-212ENST00000519245 MAGEB6P1A0A0J9YX57 407 aa10.08□□□□□ -0.8
LAMA4-212ENST00000519245 ZMYND10O75800 440 aa10.08□□□□□ -0.8
LAMA4-212ENST00000519245 PPP1R26Q5T8A7 1209 aaPredicted RBP10.08□□□□□ -0.8
LAMA4-212ENST00000519245 VWA5B2Q8N398 1253 aa10.08□□□□□ -0.8
LAMA4-212ENST00000519245 TOPBP1Q92547 1522 aa10.07□□□□□ -0.8
LAMA4-212ENST00000519245 QPCTQ16769 361 aa10.07□□□□□ -0.8
LAMA4-212ENST00000519245 ERFEQ4G0M1 354 aa10.06□□□□□ -0.8
LAMA4-212ENST00000519245 KANK3Q6NY19 840 aa10.06□□□□□ -0.8
LAMA4-212ENST00000519245 TSC1Q92574 1164 aa10.06□□□□□ -0.8
LAMA4-212ENST00000519245 CARD14Q9BXL6 1004 aa10.06□□□□□ -0.8
LAMA4-212ENST00000519245 ZNF608Q9ULD9 1512 aaPredicted RBP10.06□□□□□ -0.8
LAMA4-212ENST00000519245 CDC14CA4D256 554 aa10.05□□□□□ -0.8
LAMA4-212ENST00000519245 LIMD1Q9UGP4 676 aa10.05□□□□□ -0.8
LAMA4-212ENST00000519245 CTSOP43234 321 aaPredicted RBP10.04□□□□□ -0.8
LAMA4-212ENST00000519245 FOXK2Q01167 660 aa10.04□□□□□ -0.8
LAMA4-212ENST00000519245 SV2AQ7L0J3 742 aa10.04□□□□□ -0.8
LAMA4-212ENST00000519245 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
LAMA4-212ENST00000519245 SENP3-EIF4A1A0A087X0R7 540 aa10.03□□□□□ -0.8
LAMA4-212ENST00000519245 MARSP56192 900 aaKnown RBP10.03□□□□□ -0.8
LAMA4-212ENST00000519245 DNMBPQ6XZF7 1577 aa10.02□□□□□ -0.81
LAMA4-212ENST00000519245 LILRB3O75022 631 aa10.02□□□□□ -0.81
LAMA4-212ENST00000519245 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
LAMA4-212ENST00000519245 AGBL1Q96MI9 1066 aa10.02□□□□□ -0.81
LAMA4-212ENST00000519245 ADAMTS2O95450 1211 aa10.01□□□□□ -0.81
LAMA4-212ENST00000519245 XP32Q5T750 250 aa10.01□□□□□ -0.81
LAMA4-212ENST00000519245 SCARF2Q96GP6 870 aaPredicted RBP10.01□□□□□ -0.81
LAMA4-212ENST00000519245 INSM2Q96T92 566 aaPredicted RBP10.01□□□□□ -0.81
LAMA4-212ENST00000519245 IFT140Q96RY7 1462 aa10.01□□□□□ -0.81
LAMA4-212ENST00000519245 ABCC8Q09428 1581 aa10.01□□□□□ -0.81
LAMA4-212ENST00000519245 TUSC1Q2TAM9 212 aa10□□□□□ -0.81
LAMA4-212ENST00000519245 MYSM1Q5VVJ2 828 aa10□□□□□ -0.81
LAMA4-212ENST00000519245 RNF217Q8TC41 542 aa10□□□□□ -0.81
LAMA4-212ENST00000519245 GPKOWQ92917 476 aaPredicted RBP eCLIP10□□□□□ -0.81
LAMA4-212ENST00000519245 TARBP1Q13395 1621 aaKnown RBP10□□□□□ -0.81
LAMA4-212ENST00000519245 RAD54L2Q9Y4B4 1467 aa9.99□□□□□ -0.81
LAMA4-212ENST00000519245 NUTM2BA6NNL0 878 aaPredicted RBP9.99□□□□□ -0.81
LAMA4-212ENST00000519245 NUTM2EB1AL46 878 aaPredicted RBP9.99□□□□□ -0.81
LAMA4-212ENST00000519245 GAS6Q14393 721 aa9.99□□□□□ -0.81
LAMA4-212ENST00000519245 NUTM2DQ5VT03 806 aaPredicted RBP9.99□□□□□ -0.81
LAMA4-212ENST00000519245 NUTM2AQ8IVF1 878 aaPredicted RBP9.99□□□□□ -0.81
LAMA4-212ENST00000519245 AQRO60306 1485 aaKnown RBP eCLIP9.98□□□□□ -0.81
LAMA4-212ENST00000519245 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
LAMA4-212ENST00000519245 RELBQ01201 579 aa9.98□□□□□ -0.81
LAMA4-212ENST00000519245 RTL5Q5HYW3 569 aaPredicted RBP9.98□□□□□ -0.81
LAMA4-212ENST00000519245 ZC3H15Q8WU90 426 aaKnown RBP9.98□□□□□ -0.81
LAMA4-212ENST00000519245 KCTD15Q96SI1 283 aaPredicted RBP9.98□□□□□ -0.81
LAMA4-212ENST00000519245 CUX1P39880 1505 aa9.97□□□□□ -0.81
LAMA4-212ENST00000519245 HELBQ8NG08 1087 aaPredicted RBP9.97□□□□□ -0.81
LAMA4-212ENST00000519245 TRIM66O15016 1216 aa9.96□□□□□ -0.82
LAMA4-212ENST00000519245 ITGB2P05107 769 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms