RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
CLN8-203ENST00000518780 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
CLN8-203ENST00000518780 NGLY1Q96IV0 654 aa12.72□□□□□ -0.37
CLN8-203ENST00000518780 NUDCQ9Y266 331 aa12.72□□□□□ -0.37
CLN8-203ENST00000518780 PHRF1Q9P1Y6 1649 aaKnown RBP12.72□□□□□ -0.37
CLN8-203ENST00000518780 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.37
CLN8-203ENST00000518780 CRYBG1Q9Y4K1 1723 aa12.71□□□□□ -0.37
CLN8-203ENST00000518780 DIAPH1O60610 1272 aaKnown RBP12.71□□□□□ -0.37
CLN8-203ENST00000518780 CHRNA2Q15822 529 aa12.71□□□□□ -0.37
CLN8-203ENST00000518780 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
CLN8-203ENST00000518780 ZBTB7CA1YPR0 619 aa12.7□□□□□ -0.38
CLN8-203ENST00000518780 EVA1CP58658 441 aa12.7□□□□□ -0.38
CLN8-203ENST00000518780 C8orf37Q96NL8 207 aa12.7□□□□□ -0.38
CLN8-203ENST00000518780 BTG4Q9NY30 223 aa12.7□□□□□ -0.38
CLN8-203ENST00000518780 AXIN2Q9Y2T1 843 aa12.7□□□□□ -0.38
CLN8-203ENST00000518780 ERBB3P21860 1342 aa12.69□□□□□ -0.38
CLN8-203ENST00000518780 UNC5CLQ8IV45 518 aa12.69□□□□□ -0.38
CLN8-203ENST00000518780 ANKRD24Q8TF21 1146 aa12.69□□□□□ -0.38
CLN8-203ENST00000518780 SLIT2O94813 1529 aa12.68□□□□□ -0.38
CLN8-203ENST00000518780 WDR17Q8IZU2 1322 aa12.68□□□□□ -0.38
CLN8-203ENST00000518780 IL13P35225 146 aa12.68□□□□□ -0.38
CLN8-203ENST00000518780 EIF4A2Q14240 407 aaKnown RBP12.68□□□□□ -0.38
CLN8-203ENST00000518780 MIER1Q8N108 512 aa12.68□□□□□ -0.38
CLN8-203ENST00000518780 LRP6O75581 1613 aa12.68□□□□□ -0.38
CLN8-203ENST00000518780 COL14A1Q05707 1796 aaKnown RBP12.68□□□□□ -0.38
CLN8-203ENST00000518780 ABCA3Q99758 1704 aa12.68□□□□□ -0.38
CLN8-203ENST00000518780 CSB-PGBD3P0DP91 1061 aa12.67□□□□□ -0.38
CLN8-203ENST00000518780 ZNF772Q68DY9 489 aaPredicted RBP12.67□□□□□ -0.38
CLN8-203ENST00000518780 PNNQ9H307 717 aaKnown RBP12.67□□□□□ -0.38
CLN8-203ENST00000518780 MRS2Q9HD23 443 aa12.67□□□□□ -0.38
CLN8-203ENST00000518780 USP21Q9UK80 565 aa12.67□□□□□ -0.38
CLN8-203ENST00000518780 CARD10Q9BWT7 1032 aa12.66□□□□□ -0.38
CLN8-203ENST00000518780 CAMTA1Q9Y6Y1 1673 aa12.66□□□□□ -0.38
CLN8-203ENST00000518780 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
CLN8-203ENST00000518780 VPS72Q15906 364 aa12.65□□□□□ -0.38
CLN8-203ENST00000518780 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.38
CLN8-203ENST00000518780 THRAP3Q9Y2W1 955 aaKnown RBP12.65□□□□□ -0.38
CLN8-203ENST00000518780 PLEKHG2Q9H7P9 1386 aa12.65□□□□□ -0.38
CLN8-203ENST00000518780 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
CLN8-203ENST00000518780 BCL9LQ86UU0 1499 aa12.65□□□□□ -0.38
CLN8-203ENST00000518780 AFF2P51816 1311 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 IGSF1Q8N6C5 1336 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 LMO7Q8WWI1 1683 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 CRB1P82279 1406 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 FCHSD2O94868 740 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 WDR43Q15061 677 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLN8-203ENST00000518780 PNISRQ8TF01 805 aaKnown RBP12.64□□□□□ -0.39
CLN8-203ENST00000518780 LTV1Q96GA3 475 aaPredicted RBP12.64□□□□□ -0.39
CLN8-203ENST00000518780 EYA1Q99502 592 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 STRN4Q9NRL3 753 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 NLRP2Q9NX02 1062 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 TRPC5Q9UL62 973 aaPredicted RBP12.64□□□□□ -0.39
CLN8-203ENST00000518780 MAP2P11137 1827 aaKnown RBP12.64□□□□□ -0.39
CLN8-203ENST00000518780 COL18A1P39060 1754 aa12.64□□□□□ -0.39
CLN8-203ENST00000518780 U2SURPO15042 1029 aaKnown RBP12.63□□□□□ -0.39
CLN8-203ENST00000518780 NBPF6Q5VWK0 638 aa12.63□□□□□ -0.39
CLN8-203ENST00000518780 LARP1Q6PKG0 1096 aaKnown RBP12.63□□□□□ -0.39
CLN8-203ENST00000518780 NBPF4Q96M43 638 aa12.63□□□□□ -0.39
CLN8-203ENST00000518780 CDCA7Q9BWT1 371 aaPredicted RBP12.63□□□□□ -0.39
CLN8-203ENST00000518780 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
CLN8-203ENST00000518780 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
CLN8-203ENST00000518780 PEAK1Q9H792 1746 aa12.62□□□□□ -0.39
CLN8-203ENST00000518780 KDRP35968 1356 aa12.62□□□□□ -0.39
CLN8-203ENST00000518780 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
CLN8-203ENST00000518780 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLN8-203ENST00000518780 TCP11L2Q8N4U5 519 aa12.62□□□□□ -0.39
CLN8-203ENST00000518780 NWD2Q9ULI1 1742 aa12.62□□□□□ -0.39
CLN8-203ENST00000518780 SPATA31A1Q5TZJ5 1347 aa12.62□□□□□ -0.39
CLN8-203ENST00000518780 LTN1O94822 1766 aa12.61□□□□□ -0.39
CLN8-203ENST00000518780 BARGINQ6ZT62 677 aa12.61□□□□□ -0.39
CLN8-203ENST00000518780 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
CLN8-203ENST00000518780 NEFMP07197 916 aa12.6□□□□□ -0.39
CLN8-203ENST00000518780 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
CLN8-203ENST00000518780 SULT6B1Q6IMI4 303 aa12.6□□□□□ -0.39
CLN8-203ENST00000518780 RAPGEF4Q8WZA2 1011 aa12.6□□□□□ -0.39
CLN8-203ENST00000518780 GJD4Q96KN9 370 aaPredicted RBP12.6□□□□□ -0.39
CLN8-203ENST00000518780 QTRT2Q9H974 415 aaKnown RBP12.6□□□□□ -0.39
CLN8-203ENST00000518780 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
CLN8-203ENST00000518780 ADAMTS8Q9UP79 889 aa12.59□□□□□ -0.39
CLN8-203ENST00000518780 CCDC9Q9Y3X0 531 aaKnown RBP12.59□□□□□ -0.39
CLN8-203ENST00000518780 ATRNO75882 1429 aa12.59□□□□□ -0.39
CLN8-203ENST00000518780 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
CLN8-203ENST00000518780 IL2RBP14784 551 aa12.58□□□□□ -0.4
CLN8-203ENST00000518780 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
CLN8-203ENST00000518780 AMOTQ4VCS5 1084 aa12.58□□□□□ -0.4
CLN8-203ENST00000518780 RSPH6AQ9H0K4 717 aa12.58□□□□□ -0.4
CLN8-203ENST00000518780 FAM208AQ9UK61 1670 aaKnown RBP12.57□□□□□ -0.4
CLN8-203ENST00000518780 RBM6P78332 1123 aaKnown RBP12.57□□□□□ -0.4
CLN8-203ENST00000518780 PLCH1Q4KWH8 1693 aa12.57□□□□□ -0.4
CLN8-203ENST00000518780 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.57□□□□□ -0.4
CLN8-203ENST00000518780 HMOX1P09601 288 aa12.56□□□□□ -0.4
CLN8-203ENST00000518780 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
CLN8-203ENST00000518780 PLEKHO1Q53GL0 409 aaPredicted RBP12.56□□□□□ -0.4
CLN8-203ENST00000518780 NGEFQ8N5V2 710 aa12.56□□□□□ -0.4
CLN8-203ENST00000518780 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
CLN8-203ENST00000518780 SPG7Q9UQ90 795 aa12.56□□□□□ -0.4
CLN8-203ENST00000518780 NRAPQ86VF7 1730 aa12.55□□□□□ -0.4
CLN8-203ENST00000518780 RXRBP28702 533 aa12.55□□□□□ -0.4
CLN8-203ENST00000518780 PRKAR2BP31323 418 aa12.55□□□□□ -0.4
CLN8-203ENST00000518780 FAM9BQ8IZU0 186 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms