RNA–Protein interactions for RNA: ENST00000517997.5

CDK16-210, Transcript of cyclin dependent kinase 16, humanhuman

TSL 4

Gene CDK16, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-210ENST00000517997 CARD14Q9BXL6 1004 aa18.26■□□□□ 0.51
CDK16-210ENST00000517997 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
CDK16-210ENST00000517997 FYB1O15117 783 aa18.25■□□□□ 0.51
CDK16-210ENST00000517997 SPATA31A1Q5TZJ5 1347 aa18.24■□□□□ 0.51
CDK16-210ENST00000517997 ONECUT3O60422 494 aaPredicted RBP18.24■□□□□ 0.51
CDK16-210ENST00000517997 THSD7AQ9UPZ6 1657 aa18.24■□□□□ 0.51
CDK16-210ENST00000517997 LARP1Q6PKG0 1096 aaKnown RBP18.23■□□□□ 0.51
CDK16-210ENST00000517997 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
CDK16-210ENST00000517997 KIF7Q2M1P5 1343 aa18.23■□□□□ 0.51
CDK16-210ENST00000517997 WNK3Q9BYP7 1800 aa18.22■□□□□ 0.51
CDK16-210ENST00000517997 FAM98CQ17RN3 349 aaKnown RBP18.22■□□□□ 0.51
CDK16-210ENST00000517997 SEPT12Q8IYM1 358 aa18.22■□□□□ 0.51
CDK16-210ENST00000517997 AXIN2Q9Y2T1 843 aa18.22■□□□□ 0.51
CDK16-210ENST00000517997 CRB1P82279 1406 aa18.22■□□□□ 0.51
CDK16-210ENST00000517997 CGNL1Q0VF96 1302 aa18.22■□□□□ 0.51
CDK16-210ENST00000517997 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
CDK16-210ENST00000517997 FAM208AQ9UK61 1670 aaKnown RBP18.2■□□□□ 0.5
CDK16-210ENST00000517997 A0A0G2JS52 829 aa18.2■□□□□ 0.5
CDK16-210ENST00000517997 MYT1Q01538 1121 aa18.2■□□□□ 0.5
CDK16-210ENST00000517997 PANK3Q9H999 370 aa18.2■□□□□ 0.5
CDK16-210ENST00000517997 WDR17Q8IZU2 1322 aa18.2■□□□□ 0.5
CDK16-210ENST00000517997 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
CDK16-210ENST00000517997 PARP4Q9UKK3 1724 aaKnown RBP18.18■□□□□ 0.5
CDK16-210ENST00000517997 TCP11L2Q8N4U5 519 aa18.18■□□□□ 0.5
CDK16-210ENST00000517997 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
CDK16-210ENST00000517997 BLMP54132 1417 aaPredicted RBP18.17■□□□□ 0.5
CDK16-210ENST00000517997 BARGINQ6ZT62 677 aa18.17■□□□□ 0.5
CDK16-210ENST00000517997 TOM1L2Q6ZVM7 507 aa18.17■□□□□ 0.5
CDK16-210ENST00000517997 THRAP3Q9Y2W1 955 aaKnown RBP18.17■□□□□ 0.5
CDK16-210ENST00000517997 CSB-PGBD3P0DP91 1061 aa18.16■□□□□ 0.5
CDK16-210ENST00000517997 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
CDK16-210ENST00000517997 IP6K1Q92551 441 aa18.15■□□□□ 0.5
CDK16-210ENST00000517997 UPF1Q92900 1129 aaKnown RBP eCLIP18.15■□□□□ 0.55e-6■■■■□ 20.6
CDK16-210ENST00000517997 ERBB3P21860 1342 aa18.15■□□□□ 0.5
CDK16-210ENST00000517997 RTL1A6NKG5 1358 aa18.15■□□□□ 0.5
CDK16-210ENST00000517997 RGPD2P0DJD1 1756 aa18.14■□□□□ 0.5
CDK16-210ENST00000517997 FBLN1P23142 703 aa18.14■□□□□ 0.49
CDK16-210ENST00000517997 AMPHP49418 695 aa18.14■□□□□ 0.49
CDK16-210ENST00000517997 KRT27Q7Z3Y8 459 aa18.14■□□□□ 0.49
CDK16-210ENST00000517997 PEAK1Q9H792 1746 aa18.14■□□□□ 0.49
CDK16-210ENST00000517997 NSD2O96028 1365 aa18.14■□□□□ 0.49
CDK16-210ENST00000517997 RRS1Q15050 365 aaKnown RBP18.13■□□□□ 0.49
CDK16-210ENST00000517997 CARD10Q9BWT7 1032 aa18.13■□□□□ 0.49
CDK16-210ENST00000517997 WASHC2AQ641Q2 1341 aa18.13■□□□□ 0.49
CDK16-210ENST00000517997 LRRC37A3O60309 1634 aa18.12■□□□□ 0.49
CDK16-210ENST00000517997 HOXC9P31274 260 aa18.12■□□□□ 0.49
CDK16-210ENST00000517997 ANKRD24Q8TF21 1146 aa18.12■□□□□ 0.49
CDK16-210ENST00000517997 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
CDK16-210ENST00000517997 KIF24Q5T7B8 1368 aa18.12■□□□□ 0.49
CDK16-210ENST00000517997 NLRP2Q9NX02 1062 aa18.1■□□□□ 0.49
CDK16-210ENST00000517997 FLT4P35916 1363 aa18.09■□□□□ 0.49
CDK16-210ENST00000517997 LTV1Q96GA3 475 aaPredicted RBP18.08■□□□□ 0.48
CDK16-210ENST00000517997 CDCA7Q9BWT1 371 aaPredicted RBP18.08■□□□□ 0.48
CDK16-210ENST00000517997 DISP2A7MBM2 1401 aa18.07■□□□□ 0.48
CDK16-210ENST00000517997 RGPD1P0DJD0 1748 aa18.07■□□□□ 0.48
CDK16-210ENST00000517997 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
CDK16-210ENST00000517997 SMG6Q86US8 1419 aaKnown RBP18.06■□□□□ 0.48
CDK16-210ENST00000517997 INSRP06213 1382 aa18.06■□□□□ 0.48
CDK16-210ENST00000517997 ZEB1P37275 1124 aaPredicted RBP18.06■□□□□ 0.48
CDK16-210ENST00000517997 CCDC125Q86Z20 511 aa18.06■□□□□ 0.48
CDK16-210ENST00000517997 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
CDK16-210ENST00000517997 SBF2Q86WG5 1849 aa18.05■□□□□ 0.48
CDK16-210ENST00000517997 TNNT2P45379 298 aaPredicted RBP18.05■□□□□ 0.48
CDK16-210ENST00000517997 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
CDK16-210ENST00000517997 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
CDK16-210ENST00000517997 KAT6BQ8WYB5 2073 aa18.04■□□□□ 0.48
CDK16-210ENST00000517997 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
CDK16-210ENST00000517997 PER1O15534 1290 aaPredicted RBP18.04■□□□□ 0.48
CDK16-210ENST00000517997 DDB1Q16531 1140 aa18.04■□□□□ 0.48
CDK16-210ENST00000517997 HSP90AB2PQ58FF8 381 aa18.04■□□□□ 0.48
CDK16-210ENST00000517997 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
CDK16-210ENST00000517997 POLKQ9UBT6 870 aa18.03■□□□□ 0.48
CDK16-210ENST00000517997 TNS1Q9HBL0 1735 aaKnown RBP18.03■□□□□ 0.48
CDK16-210ENST00000517997 IL2RBP14784 551 aa18.02■□□□□ 0.48
CDK16-210ENST00000517997 TNS2Q63HR2 1409 aa18.02■□□□□ 0.48
CDK16-210ENST00000517997 FAM196AQ6ZSG2 479 aa18.02■□□□□ 0.48
CDK16-210ENST00000517997 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
CDK16-210ENST00000517997 OVOS2A0A0G2JMS6 1433 aa18■□□□□ 0.47
CDK16-210ENST00000517997 SF3B2Q13435 895 aaKnown RBP18■□□□□ 0.47
CDK16-210ENST00000517997 EXOC5O00471 708 aa17.99■□□□□ 0.47
CDK16-210ENST00000517997 NBPF6Q5VWK0 638 aa17.99■□□□□ 0.47
CDK16-210ENST00000517997 NBPF4Q96M43 638 aa17.99■□□□□ 0.47
CDK16-210ENST00000517997 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
CDK16-210ENST00000517997 CC2D1BQ5T0F9 858 aaKnown RBP17.97■□□□□ 0.47
CDK16-210ENST00000517997 MARCH10Q8NA82 808 aaPredicted RBP17.96■□□□□ 0.47
CDK16-210ENST00000517997 MEGF6O75095 1541 aa17.96■□□□□ 0.47
CDK16-210ENST00000517997 TRIM37O94972 964 aa17.95■□□□□ 0.46
CDK16-210ENST00000517997 USHBP1Q8N6Y0 703 aa17.95■□□□□ 0.46
CDK16-210ENST00000517997 BCL9O00512 1426 aa17.95■□□□□ 0.46
CDK16-210ENST00000517997 NCAPD2Q15021 1401 aa17.95■□□□□ 0.46
CDK16-210ENST00000517997 PKD1L3Q7Z443 1732 aa17.93■□□□□ 0.46
CDK16-210ENST00000517997 EIF4A2Q14240 407 aaKnown RBP17.93■□□□□ 0.46
CDK16-210ENST00000517997 RAPGEF4Q8WZA2 1011 aa17.93■□□□□ 0.46
CDK16-210ENST00000517997 BAG6P46379 1132 aa17.92■□□□□ 0.46
CDK16-210ENST00000517997 DEFB132Q7Z7B7 95 aa17.92■□□□□ 0.46
CDK16-210ENST00000517997 NHSQ6T4R5 1651 aa17.92■□□□□ 0.46
CDK16-210ENST00000517997 CNGB1Q14028 1251 aaPredicted RBP17.91■□□□□ 0.46
CDK16-210ENST00000517997 EYA1Q99502 592 aa17.91■□□□□ 0.46
CDK16-210ENST00000517997 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
CDK16-210ENST00000517997 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms