RNA–Protein interactions for RNA: ENST00000517955.2

ARFGEF1-202, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 1,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-202ENST00000517955 JCADQ9P266 1359 aa15.48■□□□□ 0.07
ARFGEF1-202ENST00000517955 NUTM2GQ5VZR2 741 aa15.47■□□□□ 0.07
ARFGEF1-202ENST00000517955 MAP2P11137 1827 aaKnown RBP15.47■□□□□ 0.07
ARFGEF1-202ENST00000517955 INSRP06213 1382 aa15.47■□□□□ 0.07
ARFGEF1-202ENST00000517955 PHRF1Q9P1Y6 1649 aaKnown RBP15.46■□□□□ 0.07
ARFGEF1-202ENST00000517955 CCER2I3L3R5 266 aa15.46■□□□□ 0.07
ARFGEF1-202ENST00000517955 HSPA1LP34931 641 aa15.46■□□□□ 0.07
ARFGEF1-202ENST00000517955 POLKQ9UBT6 870 aa15.46■□□□□ 0.07
ARFGEF1-202ENST00000517955 CPDO75976 1380 aa15.46■□□□□ 0.07
ARFGEF1-202ENST00000517955 ARHGEF25Q86VW2 580 aa15.45■□□□□ 0.06
ARFGEF1-202ENST00000517955 ABCA3Q99758 1704 aa15.45■□□□□ 0.06
ARFGEF1-202ENST00000517955 ABCC6O95255 1503 aa15.44■□□□□ 0.06
ARFGEF1-202ENST00000517955 MIER1Q8N108 512 aa15.44■□□□□ 0.06
ARFGEF1-202ENST00000517955 RTL1A6NKG5 1358 aa15.43■□□□□ 0.06
ARFGEF1-202ENST00000517955 MAP3K19Q56UN5 1328 aa15.43■□□□□ 0.06
ARFGEF1-202ENST00000517955 SPATA31A6Q5VVP1 1343 aa15.43■□□□□ 0.06
ARFGEF1-202ENST00000517955 CDK12Q9NYV4 1490 aaPredicted RBP15.42■□□□□ 0.06
ARFGEF1-202ENST00000517955 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
ARFGEF1-202ENST00000517955 MTHFSP49914 203 aa15.42■□□□□ 0.06
ARFGEF1-202ENST00000517955 CNGB1Q14028 1251 aaPredicted RBP15.42■□□□□ 0.06
ARFGEF1-202ENST00000517955 CABLES1Q8TDN4 633 aa15.42■□□□□ 0.06
ARFGEF1-202ENST00000517955 FBLN1P23142 703 aa15.41■□□□□ 0.06
ARFGEF1-202ENST00000517955 REM2Q8IYK8 340 aaPredicted RBP15.41■□□□□ 0.06
ARFGEF1-202ENST00000517955 FLT4P35916 1363 aa15.4■□□□□ 0.06
ARFGEF1-202ENST00000517955 LTN1O94822 1766 aa15.4■□□□□ 0.06
ARFGEF1-202ENST00000517955 RRS1Q15050 365 aaKnown RBP15.4■□□□□ 0.06
ARFGEF1-202ENST00000517955 IP6K1Q92551 441 aa15.4■□□□□ 0.06
ARFGEF1-202ENST00000517955 EMILIN1Q9Y6C2 1016 aa15.4■□□□□ 0.06
ARFGEF1-202ENST00000517955 COL18A1P39060 1754 aa15.39■□□□□ 0.05
ARFGEF1-202ENST00000517955 PEAK1Q9H792 1746 aa15.39■□□□□ 0.05
ARFGEF1-202ENST00000517955 BLMP54132 1417 aaPredicted RBP15.38■□□□□ 0.05
ARFGEF1-202ENST00000517955 CFAP53Q96M91 514 aa15.38■□□□□ 0.05
ARFGEF1-202ENST00000517955 COL3A1P02461 1466 aaPredicted RBP15.38■□□□□ 0.05
ARFGEF1-202ENST00000517955 KIAA0232Q92628 1395 aa15.37■□□□□ 0.05
ARFGEF1-202ENST00000517955 HOXC9P31274 260 aa15.37■□□□□ 0.05
ARFGEF1-202ENST00000517955 AMPHP49418 695 aa15.37■□□□□ 0.05
ARFGEF1-202ENST00000517955 ZC3H6P61129 1189 aaKnown RBP15.37■□□□□ 0.05
ARFGEF1-202ENST00000517955 SSUH2Q9Y2M2 353 aa15.37■□□□□ 0.05
ARFGEF1-202ENST00000517955 LMO7Q8WWI1 1683 aa15.36■□□□□ 0.05
ARFGEF1-202ENST00000517955 SOX12O15370 315 aa15.36■□□□□ 0.05
ARFGEF1-202ENST00000517955 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
ARFGEF1-202ENST00000517955 CCDC184Q52MB2 194 aa15.35■□□□□ 0.05
ARFGEF1-202ENST00000517955 PRDM11Q9NQV5 511 aa15.35■□□□□ 0.05
ARFGEF1-202ENST00000517955 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
ARFGEF1-202ENST00000517955 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
ARFGEF1-202ENST00000517955 HSP90AB2PQ58FF8 381 aa15.34■□□□□ 0.05
ARFGEF1-202ENST00000517955 PNISRQ8TF01 805 aaKnown RBP15.34■□□□□ 0.05
ARFGEF1-202ENST00000517955 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
ARFGEF1-202ENST00000517955 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.04
ARFGEF1-202ENST00000517955 DIAPH1O60610 1272 aaKnown RBP15.33■□□□□ 0.04
ARFGEF1-202ENST00000517955 IL13P35225 146 aa15.33■□□□□ 0.04
ARFGEF1-202ENST00000517955 AXIN2Q9Y2T1 843 aa15.33■□□□□ 0.04
ARFGEF1-202ENST00000517955 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
ARFGEF1-202ENST00000517955 CAMTA1Q9Y6Y1 1673 aa15.32■□□□□ 0.04
ARFGEF1-202ENST00000517955 EIF4A2Q14240 407 aaKnown RBP15.31■□□□□ 0.04
ARFGEF1-202ENST00000517955 NUDCQ9Y266 331 aa15.31■□□□□ 0.04
ARFGEF1-202ENST00000517955 LRP6O75581 1613 aa15.31■□□□□ 0.04
ARFGEF1-202ENST00000517955 SLIT2O94813 1529 aa15.3■□□□□ 0.04
ARFGEF1-202ENST00000517955 PLEKHG5O94827 1062 aa15.3■□□□□ 0.04
ARFGEF1-202ENST00000517955 ERBB3P21860 1342 aa15.3■□□□□ 0.04
ARFGEF1-202ENST00000517955 CHRNA2Q15822 529 aa15.3■□□□□ 0.04
ARFGEF1-202ENST00000517955 FNBP4Q8N3X1 1017 aaPredicted RBP15.3■□□□□ 0.04
ARFGEF1-202ENST00000517955 RGPD5Q99666 1765 aa15.3■□□□□ 0.04
ARFGEF1-202ENST00000517955 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
ARFGEF1-202ENST00000517955 RGPD1P0DJD0 1748 aa15.29■□□□□ 0.04
ARFGEF1-202ENST00000517955 FAM208AQ9UK61 1670 aaKnown RBP15.29■□□□□ 0.04
ARFGEF1-202ENST00000517955 COL5A2P05997 1499 aaPredicted RBP15.29■□□□□ 0.04
ARFGEF1-202ENST00000517955 NCAPD2Q15021 1401 aa15.29■□□□□ 0.04
ARFGEF1-202ENST00000517955 NUTM2BA6NNL0 878 aaPredicted RBP15.29■□□□□ 0.04
ARFGEF1-202ENST00000517955 NUTM2EB1AL46 878 aaPredicted RBP15.29■□□□□ 0.04
ARFGEF1-202ENST00000517955 NUTM2AQ8IVF1 878 aaPredicted RBP15.29■□□□□ 0.04
ARFGEF1-202ENST00000517955 ADAMTS2O95450 1211 aa15.28■□□□□ 0.04
ARFGEF1-202ENST00000517955 ANKRD24Q8TF21 1146 aa15.28■□□□□ 0.04
ARFGEF1-202ENST00000517955 WDR17Q8IZU2 1322 aa15.27■□□□□ 0.04
ARFGEF1-202ENST00000517955 IGSF1Q8N6C5 1336 aa15.27■□□□□ 0.04
ARFGEF1-202ENST00000517955 POTEHQ6S545 545 aa15.27■□□□□ 0.04
ARFGEF1-202ENST00000517955 KDRP35968 1356 aa15.26■□□□□ 0.03
ARFGEF1-202ENST00000517955 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
ARFGEF1-202ENST00000517955 ZBTB7CA1YPR0 619 aa15.26■□□□□ 0.03
ARFGEF1-202ENST00000517955 EYA1Q99502 592 aa15.26■□□□□ 0.03
ARFGEF1-202ENST00000517955 BTG4Q9NY30 223 aa15.26■□□□□ 0.03
ARFGEF1-202ENST00000517955 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
ARFGEF1-202ENST00000517955 PLEKHG2Q9H7P9 1386 aa15.25■□□□□ 0.03
ARFGEF1-202ENST00000517955 FCHSD2O94868 740 aa15.25■□□□□ 0.03
ARFGEF1-202ENST00000517955 WDR43Q15061 677 aaKnown RBP eCLIP15.25■□□□□ 0.03
ARFGEF1-202ENST00000517955 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 NBPF6Q5VWK0 638 aa15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 NGLY1Q96IV0 654 aa15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 NBPF4Q96M43 638 aa15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 CARD10Q9BWT7 1032 aa15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 PNNQ9H307 717 aaKnown RBP15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 ADAMTS8Q9UP79 889 aa15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 BCL9LQ86UU0 1499 aa15.24■□□□□ 0.03
ARFGEF1-202ENST00000517955 U2AF1L5P0DN76 240 aaPredicted RBP15.23■□□□□ 0.03
ARFGEF1-202ENST00000517955 EVA1CP58658 441 aa15.23■□□□□ 0.03
ARFGEF1-202ENST00000517955 U2AF1Q01081 240 aaKnown RBP eCLIP15.23■□□□□ 0.03
ARFGEF1-202ENST00000517955 UNC5CLQ8IV45 518 aa15.23■□□□□ 0.03
ARFGEF1-202ENST00000517955 CRB1P82279 1406 aa15.23■□□□□ 0.03
ARFGEF1-202ENST00000517955 PITPNM1O00562 1244 aa15.22■□□□□ 0.03
ARFGEF1-202ENST00000517955 U2SURPO15042 1029 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms