RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SBNO2Q9Y2G9 1366 aa11.95□□□□□ -0.5
SCARNA20.3-201ENST00000516913 PARP4Q9UKK3 1724 aaKnown RBP11.95□□□□□ -0.5
SCARNA20.3-201ENST00000516913 FBLN1P23142 703 aa11.95□□□□□ -0.5
SCARNA20.3-201ENST00000516913 NME9Q86XW9 330 aa11.95□□□□□ -0.5
SCARNA20.3-201ENST00000516913 SLC12A5Q9H2X9 1139 aa11.95□□□□□ -0.5
SCARNA20.3-201ENST00000516913 PARD3Q8TEW0 1356 aa11.94□□□□□ -0.5
SCARNA20.3-201ENST00000516913 LRRC37A3O60309 1634 aa11.94□□□□□ -0.5
SCARNA20.3-201ENST00000516913 EVC2Q86UK5 1308 aa11.94□□□□□ -0.5
SCARNA20.3-201ENST00000516913 TOM1L2Q6ZVM7 507 aa11.94□□□□□ -0.5
SCARNA20.3-201ENST00000516913 PLSCR1O15162 318 aa11.93□□□□□ -0.5
SCARNA20.3-201ENST00000516913 DDB1Q16531 1140 aa11.93□□□□□ -0.5
SCARNA20.3-201ENST00000516913 CARD10Q9BWT7 1032 aa11.93□□□□□ -0.5
SCARNA20.3-201ENST00000516913 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
SCARNA20.3-201ENST00000516913 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
SCARNA20.3-201ENST00000516913 PTGER2P43116 358 aa11.92□□□□□ -0.5
SCARNA20.3-201ENST00000516913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.92□□□□□ -0.5
SCARNA20.3-201ENST00000516913 OVOS2A0A0G2JMS6 1433 aa11.92□□□□□ -0.5
SCARNA20.3-201ENST00000516913 OVOS2A0A0J9YW53 1432 aa11.92□□□□□ -0.5
SCARNA20.3-201ENST00000516913 OVOS2Q6IE36 1432 aa11.92□□□□□ -0.5
SCARNA20.3-201ENST00000516913 USP31Q70CQ4 1352 aa11.92□□□□□ -0.5
SCARNA20.3-201ENST00000516913 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
SCARNA20.3-201ENST00000516913 RGPD5Q99666 1765 aa11.91□□□□□ -0.5
SCARNA20.3-201ENST00000516913 BCL9O00512 1426 aa11.91□□□□□ -0.5
SCARNA20.3-201ENST00000516913 KTN1Q86UP2 1357 aaKnown RBP11.91□□□□□ -0.5
SCARNA20.3-201ENST00000516913 SBF2Q86WG5 1849 aa11.9□□□□□ -0.5
SCARNA20.3-201ENST00000516913 TESK2Q96S53 571 aa11.9□□□□□ -0.5
SCARNA20.3-201ENST00000516913 ZBTB7AO95365 584 aa11.89□□□□□ -0.51
SCARNA20.3-201ENST00000516913 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
SCARNA20.3-201ENST00000516913 SGIP1Q9BQI5 828 aa11.89□□□□□ -0.51
SCARNA20.3-201ENST00000516913 AKAP12Q02952 1782 aa11.89□□□□□ -0.51
SCARNA20.3-201ENST00000516913 TTC21AQ8NDW8 1320 aa11.88□□□□□ -0.51
SCARNA20.3-201ENST00000516913 ACSBG1Q96GR2 724 aa11.88□□□□□ -0.51
SCARNA20.3-201ENST00000516913 LRRC4BQ9NT99 713 aa11.88□□□□□ -0.51
SCARNA20.3-201ENST00000516913 ERBB3P21860 1342 aa11.87□□□□□ -0.51
SCARNA20.3-201ENST00000516913 CASZ1Q86V15 1759 aa11.87□□□□□ -0.51
SCARNA20.3-201ENST00000516913 KCNH5Q8NCM2 988 aa11.87□□□□□ -0.51
SCARNA20.3-201ENST00000516913 ATF5Q9Y2D1 282 aaPredicted RBP11.87□□□□□ -0.51
SCARNA20.3-201ENST00000516913 ZNF827Q17R98 1081 aa11.86□□□□□ -0.51
SCARNA20.3-201ENST00000516913 NBPF14Q5TI25 921 aa11.86□□□□□ -0.51
SCARNA20.3-201ENST00000516913 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
SCARNA20.3-201ENST00000516913 SPON1Q9HCB6 807 aa11.86□□□□□ -0.51
SCARNA20.3-201ENST00000516913 A0A1W2PP64 1363 aa11.86□□□□□ -0.51
SCARNA20.3-201ENST00000516913 EXOC5O00471 708 aa11.85□□□□□ -0.51
SCARNA20.3-201ENST00000516913 CSB-PGBD3P0DP91 1061 aa11.85□□□□□ -0.51
SCARNA20.3-201ENST00000516913 KCNQ4P56696 695 aa11.85□□□□□ -0.51
SCARNA20.3-201ENST00000516913 WNK3Q9BYP7 1800 aa11.84□□□□□ -0.51
SCARNA20.3-201ENST00000516913 MON2Q7Z3U7 1717 aa11.84□□□□□ -0.51
SCARNA20.3-201ENST00000516913 SLC15A2Q16348 729 aa11.84□□□□□ -0.51
SCARNA20.3-201ENST00000516913 TMC1Q8TDI8 760 aa11.84□□□□□ -0.51
SCARNA20.3-201ENST00000516913 ANKRD24Q8TF21 1146 aa11.84□□□□□ -0.51
SCARNA20.3-201ENST00000516913 NLRP2Q9NX02 1062 aa11.84□□□□□ -0.51
SCARNA20.3-201ENST00000516913 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
SCARNA20.3-201ENST00000516913 ST20-MTHFSA0A0A6YYL1 179 aa11.83□□□□□ -0.52
SCARNA20.3-201ENST00000516913 CDCA7Q9BWT1 371 aaPredicted RBP11.83□□□□□ -0.52
SCARNA20.3-201ENST00000516913 CCDC7Q96M83 1385 aa11.82□□□□□ -0.52
SCARNA20.3-201ENST00000516913 USP54Q70EL1 1684 aa11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 IL2RBP14784 551 aa11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 IP6K1Q92551 441 aa11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 LTV1Q96GA3 475 aaPredicted RBP11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 PAPPAQ13219 1627 aa11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 CEP350Q5VT06 3117 aa11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 MAP3K19Q56UN5 1328 aa11.81□□□□□ -0.52
SCARNA20.3-201ENST00000516913 NSD2O96028 1365 aa11.8□□□□□ -0.52
SCARNA20.3-201ENST00000516913 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
SCARNA20.3-201ENST00000516913 YY1P25490 414 aa11.8□□□□□ -0.52
SCARNA20.3-201ENST00000516913 AKT1S1Q96B36 256 aa11.8□□□□□ -0.52
SCARNA20.3-201ENST00000516913 SYT17Q9BSW7 474 aa11.8□□□□□ -0.52
SCARNA20.3-201ENST00000516913 FHDC1Q9C0D6 1143 aaPredicted RBP11.8□□□□□ -0.52
SCARNA20.3-201ENST00000516913 MYOM1P52179 1685 aa11.8□□□□□ -0.52
SCARNA20.3-201ENST00000516913 NINLQ9Y2I6 1382 aa11.79□□□□□ -0.52
SCARNA20.3-201ENST00000516913 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
SCARNA20.3-201ENST00000516913 ABCC6O95255 1503 aa11.79□□□□□ -0.52
SCARNA20.3-201ENST00000516913 FYB1O15117 783 aa11.78□□□□□ -0.52
SCARNA20.3-201ENST00000516913 HOXC9P31274 260 aa11.78□□□□□ -0.52
SCARNA20.3-201ENST00000516913 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
SCARNA20.3-201ENST00000516913 NBPF6Q5VWK0 638 aa11.78□□□□□ -0.52
SCARNA20.3-201ENST00000516913 DDX54Q8TDD1 881 aaKnown RBP11.78□□□□□ -0.52
SCARNA20.3-201ENST00000516913 NBPF4Q96M43 638 aa11.78□□□□□ -0.52
SCARNA20.3-201ENST00000516913 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
SCARNA20.3-201ENST00000516913 MEGF6O75095 1541 aa11.77□□□□□ -0.52
SCARNA20.3-201ENST00000516913 USHBP1Q8N6Y0 703 aa11.77□□□□□ -0.53
SCARNA20.3-201ENST00000516913 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.53
SCARNA20.3-201ENST00000516913 CARD14Q9BXL6 1004 aa11.77□□□□□ -0.53
SCARNA20.3-201ENST00000516913 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
SCARNA20.3-201ENST00000516913 NHSQ6T4R5 1651 aa11.77□□□□□ -0.53
SCARNA20.3-201ENST00000516913 FAM208AQ9UK61 1670 aaKnown RBP11.76□□□□□ -0.53
SCARNA20.3-201ENST00000516913 PRIM1P49642 420 aaKnown RBP11.76□□□□□ -0.53
SCARNA20.3-201ENST00000516913 HDGFL2Q7Z4V5 671 aaPredicted RBP11.76□□□□□ -0.53
SCARNA20.3-201ENST00000516913 AMIGO3Q86WK7 504 aa11.76□□□□□ -0.53
SCARNA20.3-201ENST00000516913 GGNBP2Q9H3C7 697 aa11.76□□□□□ -0.53
SCARNA20.3-201ENST00000516913 PNPLA7Q6ZV29 1317 aa11.76□□□□□ -0.53
SCARNA20.3-201ENST00000516913 LTN1O94822 1766 aa11.75□□□□□ -0.53
SCARNA20.3-201ENST00000516913 SMIM5Q71RC9 77 aa11.75□□□□□ -0.53
SCARNA20.3-201ENST00000516913 MTFR1LQ9H019 292 aa11.75□□□□□ -0.53
SCARNA20.3-201ENST00000516913 TERF2IPQ9NYB0 399 aa11.75□□□□□ -0.53
SCARNA20.3-201ENST00000516913 BTAF1O14981 1849 aa11.74□□□□□ -0.53
SCARNA20.3-201ENST00000516913 HSP90AB2PQ58FF8 381 aa11.74□□□□□ -0.53
SCARNA20.3-201ENST00000516913 RGPD2P0DJD1 1756 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms