RNA–Protein interactions for RNA: ENST00000516424.1

RN7SKP253-201, Transcript of RNA, 7SK small nuclear pseudogene 253, humanhuman

BASIC

Gene RN7SKP253, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP253-201ENST00000516424 PDXDC2PQ6P474 469 aa11.86□□□□□ -0.51
RN7SKP253-201ENST00000516424 ARHGAP9Q9BRR9 750 aa11.86□□□□□ -0.51
RN7SKP253-201ENST00000516424 ATP1B4Q9UN42 357 aaPredicted RBP11.86□□□□□ -0.51
RN7SKP253-201ENST00000516424 EMILIN1Q9Y6C2 1016 aa11.86□□□□□ -0.51
RN7SKP253-201ENST00000516424 DDRGK1Q96HY6 314 aa11.85□□□□□ -0.51
RN7SKP253-201ENST00000516424 PPP2R2DQ66LE6 453 aa11.84□□□□□ -0.51
RN7SKP253-201ENST00000516424 ZSCAN1Q8NBB4 408 aa11.84□□□□□ -0.51
RN7SKP253-201ENST00000516424 SOS2Q07890 1332 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP253-201ENST00000516424 TSEN34Q9BSV6 310 aaKnown RBP11.83□□□□□ -0.52
RN7SKP253-201ENST00000516424 DNMT3LQ9UJW3 386 aa11.83□□□□□ -0.52
RN7SKP253-201ENST00000516424 VSIG8P0DPA2 414 aa11.82□□□□□ -0.52
RN7SKP253-201ENST00000516424 PPP1R26Q5T8A7 1209 aaPredicted RBP11.82□□□□□ -0.52
RN7SKP253-201ENST00000516424 SLC10A4Q96EP9 437 aa11.82□□□□□ -0.52
RN7SKP253-201ENST00000516424 OCSTAMPQ9BR26 566 aa11.82□□□□□ -0.52
RN7SKP253-201ENST00000516424 AP1G2O75843 785 aa11.81□□□□□ -0.52
RN7SKP253-201ENST00000516424 KCTD15Q96SI1 283 aaPredicted RBP11.81□□□□□ -0.52
RN7SKP253-201ENST00000516424 PPFIA3O75145 1194 aa11.8□□□□□ -0.52
RN7SKP253-201ENST00000516424 CBLBQ13191 982 aa11.8□□□□□ -0.52
RN7SKP253-201ENST00000516424 ZBTB33Q86T24 672 aa11.8□□□□□ -0.52
RN7SKP253-201ENST00000516424 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
RN7SKP253-201ENST00000516424 EPS8L1Q8TE68 723 aa11.79□□□□□ -0.52
RN7SKP253-201ENST00000516424 PGPEP1Q9NXJ5 209 aa11.79□□□□□ -0.52
RN7SKP253-201ENST00000516424 FAM181BA6NEQ2 426 aa11.78□□□□□ -0.52
RN7SKP253-201ENST00000516424 HMX1Q9NP08 348 aaPredicted RBP11.78□□□□□ -0.52
RN7SKP253-201ENST00000516424 Q6ZVU0 165 aa11.77□□□□□ -0.53
RN7SKP253-201ENST00000516424 BCANQ96GW7 911 aa11.77□□□□□ -0.53
RN7SKP253-201ENST00000516424 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
RN7SKP253-201ENST00000516424 TTLL8A6PVC2 850 aa11.76□□□□□ -0.53
RN7SKP253-201ENST00000516424 PTK2Q05397 1052 aa11.76□□□□□ -0.53
RN7SKP253-201ENST00000516424 ADAM32Q8TC27 787 aa11.76□□□□□ -0.53
RN7SKP253-201ENST00000516424 USP17L8P0C7I0 530 aa11.75□□□□□ -0.53
RN7SKP253-201ENST00000516424 INTS6LQ5JSJ4 861 aaKnown RBP11.75□□□□□ -0.53
RN7SKP253-201ENST00000516424 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.74□□□□□ -0.53
RN7SKP253-201ENST00000516424 GPSM3Q9Y4H4 160 aa11.74□□□□□ -0.53
RN7SKP253-201ENST00000516424 FIGNL2A6NMB9 653 aa11.73□□□□□ -0.53
RN7SKP253-201ENST00000516424 SPINT1O43278 529 aa11.73□□□□□ -0.53
RN7SKP253-201ENST00000516424 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
RN7SKP253-201ENST00000516424 AGBL1Q96MI9 1066 aa11.72□□□□□ -0.53
RN7SKP253-201ENST00000516424 RFC5P40937 340 aa11.71□□□□□ -0.53
RN7SKP253-201ENST00000516424 PTSQ03393 145 aa11.71□□□□□ -0.53
RN7SKP253-201ENST00000516424 RELBQ01201 579 aa11.69□□□□□ -0.54
RN7SKP253-201ENST00000516424 TMPRSS4Q9NRS4 437 aa11.69□□□□□ -0.54
RN7SKP253-201ENST00000516424 RAB15P59190 212 aa11.68□□□□□ -0.54
RN7SKP253-201ENST00000516424 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
RN7SKP253-201ENST00000516424 PNMA1Q8ND90 353 aa11.68□□□□□ -0.54
RN7SKP253-201ENST00000516424 CTSOP43234 321 aaPredicted RBP11.67□□□□□ -0.54
RN7SKP253-201ENST00000516424 GPR161Q8N6U8 529 aaKnown RBP11.67□□□□□ -0.54
RN7SKP253-201ENST00000516424 ZNF784Q8NCA9 323 aaPredicted RBP11.67□□□□□ -0.54
RN7SKP253-201ENST00000516424 INSM2Q96T92 566 aaPredicted RBP11.67□□□□□ -0.54
RN7SKP253-201ENST00000516424 DZIP3Q86Y13 1208 aaKnown RBP11.65□□□□□ -0.54
RN7SKP253-201ENST00000516424 CCDC155Q8N6L0 562 aa11.65□□□□□ -0.54
RN7SKP253-201ENST00000516424 TRIM34Q9BYJ4 488 aa11.65□□□□□ -0.54
RN7SKP253-201ENST00000516424 KRT76Q01546 638 aa11.64□□□□□ -0.55
RN7SKP253-201ENST00000516424 ZNF395Q9H8N7 513 aaPredicted RBP11.64□□□□□ -0.55
RN7SKP253-201ENST00000516424 ERVH48-1M5A8F1 160 aa11.63□□□□□ -0.55
RN7SKP253-201ENST00000516424 POLMQ9NP87 494 aaPredicted RBP11.63□□□□□ -0.55
RN7SKP253-201ENST00000516424 LILRA1O75019 489 aa11.62□□□□□ -0.55
RN7SKP253-201ENST00000516424 PCMTD1Q96MG8 357 aaPredicted RBP11.62□□□□□ -0.55
RN7SKP253-201ENST00000516424 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
RN7SKP253-201ENST00000516424 SLC35F4A4IF30 521 aa11.61□□□□□ -0.55
RN7SKP253-201ENST00000516424 ESPNB1AK53 854 aa11.61□□□□□ -0.55
RN7SKP253-201ENST00000516424 ADD1P35611 737 aaKnown RBP11.61□□□□□ -0.55
RN7SKP253-201ENST00000516424 RNF217Q8TC41 542 aa11.61□□□□□ -0.55
RN7SKP253-201ENST00000516424 CNTNAP3BQ96NU0 1288 aa11.61□□□□□ -0.55
RN7SKP253-201ENST00000516424 CNTNAP3Q9BZ76 1288 aa11.61□□□□□ -0.55
RN7SKP253-201ENST00000516424 ADH1AP07327 375 aa11.6□□□□□ -0.55
RN7SKP253-201ENST00000516424 KDF1Q8NAX2 398 aaPredicted RBP11.6□□□□□ -0.55
RN7SKP253-201ENST00000516424 TMEM259Q4ZIN3 620 aa11.59□□□□□ -0.55
RN7SKP253-201ENST00000516424 NANOS1Q8WY41 292 aaKnown RBP11.59□□□□□ -0.55
RN7SKP253-201ENST00000516424 ITGA6P23229 1130 aa11.58□□□□□ -0.56
RN7SKP253-201ENST00000516424 NEUROD2Q15784 382 aa11.58□□□□□ -0.56
RN7SKP253-201ENST00000516424 IL27Q8NEV9 243 aa11.58□□□□□ -0.56
RN7SKP253-201ENST00000516424 COL25A1Q9BXS0 654 aaPredicted RBP11.58□□□□□ -0.56
RN7SKP253-201ENST00000516424 SENP3-EIF4A1A0A087X0R7 540 aa11.56□□□□□ -0.56
RN7SKP253-201ENST00000516424 PTGIRP43119 386 aa11.56□□□□□ -0.56
RN7SKP253-201ENST00000516424 RNFT1Q5M7Z0 435 aa11.56□□□□□ -0.56
RN7SKP253-201ENST00000516424 FOXD4L5Q5VV16 416 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP253-201ENST00000516424 GJD4Q96KN9 370 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP253-201ENST00000516424 CYLDQ9NQC7 956 aa11.56□□□□□ -0.56
RN7SKP253-201ENST00000516424 ZBBXA8MT70 800 aa11.55□□□□□ -0.56
RN7SKP253-201ENST00000516424 VWA5B2Q8N398 1253 aa11.55□□□□□ -0.56
RN7SKP253-201ENST00000516424 CDC14CA4D256 554 aa11.54□□□□□ -0.56
RN7SKP253-201ENST00000516424 SEPT12Q8IYM1 358 aa11.54□□□□□ -0.56
RN7SKP253-201ENST00000516424 PCDHB9Q9Y5E1 797 aa11.54□□□□□ -0.56
RN7SKP253-201ENST00000516424 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
RN7SKP253-201ENST00000516424 GIGYF1O75420 1035 aaPredicted RBP11.53□□□□□ -0.56
RN7SKP253-201ENST00000516424 FBXO45P0C2W1 286 aa11.53□□□□□ -0.56
RN7SKP253-201ENST00000516424 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
RN7SKP253-201ENST00000516424 LYSMD3Q7Z3D4 306 aa11.49□□□□□ -0.57
RN7SKP253-201ENST00000516424 ATP5J2-PTCD1G3V325 749 aa11.47□□□□□ -0.57
RN7SKP253-201ENST00000516424 GSK3AP49840 483 aa11.47□□□□□ -0.57
RN7SKP253-201ENST00000516424 BRPF1P55201 1214 aaPredicted RBP11.47□□□□□ -0.57
RN7SKP253-201ENST00000516424 ZNF385CQ66K41 422 aaPredicted RBP11.47□□□□□ -0.57
RN7SKP253-201ENST00000516424 PRICKLE2Q7Z3G6 844 aa11.47□□□□□ -0.57
RN7SKP253-201ENST00000516424 CUEDC1Q9NWM3 386 aaPredicted RBP11.47□□□□□ -0.57
RN7SKP253-201ENST00000516424 RNF144AP50876 292 aaPredicted RBP11.46□□□□□ -0.57
RN7SKP253-201ENST00000516424 WHAMMQ8TF30 809 aa11.46□□□□□ -0.57
RN7SKP253-201ENST00000516424 ADAMTS8Q9UP79 889 aa11.46□□□□□ -0.57
RN7SKP253-201ENST00000516424 SLURP2P0DP57 97 aa11.45□□□□□ -0.58
RN7SKP253-201ENST00000516424 RHOQP17081 205 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms