RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 NCOA4Q13772 614 aa11.41□□□□□ -0.58
ATR-209ENST00000515810 AGERQ15109 404 aa11.41□□□□□ -0.58
ATR-209ENST00000515810 DZIP3Q86Y13 1208 aaKnown RBP11.41□□□□□ -0.58
ATR-209ENST00000515810 PLEKHM2Q8IWE5 1019 aa11.41□□□□□ -0.58
ATR-209ENST00000515810 PLPP7Q8NBV4 271 aa11.41□□□□□ -0.58
ATR-209ENST00000515810 STK32AQ8WU08 396 aa11.4□□□□□ -0.58
ATR-209ENST00000515810 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
ATR-209ENST00000515810 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
ATR-209ENST00000515810 CRTC2Q53ET0 693 aaPredicted RBP11.39□□□□□ -0.59
ATR-209ENST00000515810 TRAF7Q6Q0C0 670 aa11.39□□□□□ -0.59
ATR-209ENST00000515810 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
ATR-209ENST00000515810 MKRN1Q9UHC7 482 aaKnown RBP11.39□□□□□ -0.59
ATR-209ENST00000515810 USTQ9Y2C2 406 aa11.39□□□□□ -0.59
ATR-209ENST00000515810 BPHLQ86WA6 291 aaPredicted RBP11.38□□□□□ -0.59
ATR-209ENST00000515810 KCTD17Q8N5Z5 321 aa11.38□□□□□ -0.59
ATR-209ENST00000515810 MCCD1P59942 119 aaPredicted RBP11.37□□□□□ -0.59
ATR-209ENST00000515810 GGCXP38435 758 aa11.36□□□□□ -0.59
ATR-209ENST00000515810 SKOR1P84550 965 aa11.36□□□□□ -0.59
ATR-209ENST00000515810 TMEM164Q5U3C3 297 aa11.36□□□□□ -0.59
ATR-209ENST00000515810 CDCA7Q9BWT1 371 aaPredicted RBP11.36□□□□□ -0.59
ATR-209ENST00000515810 C1QTNF2Q9BXJ5 285 aa11.36□□□□□ -0.59
ATR-209ENST00000515810 NOVA2Q9UNW9 492 aaKnown RBP11.36□□□□□ -0.59
ATR-209ENST00000515810 A0A0G2JS52 829 aa11.35□□□□□ -0.59
ATR-209ENST00000515810 ANKLE1Q8NAG6 615 aa11.35□□□□□ -0.59
ATR-209ENST00000515810 USP17L15C9J2P7 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L10C9JJH3 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L13C9JLJ4 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L12C9JPN9 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L11C9JVI0 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L21D6R901 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L18D6R9N7 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L22D6RA61 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L17D6RBQ6 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L19D6RCP7 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L20D6RJB6 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 USP17L24Q0WX57 530 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 TRIM32Q13049 653 aa11.34□□□□□ -0.59
ATR-209ENST00000515810 RASA1P20936 1047 aa11.33□□□□□ -0.6
ATR-209ENST00000515810 CLDN10P78369 228 aa11.33□□□□□ -0.6
ATR-209ENST00000515810 PTK7Q13308 1070 aa11.33□□□□□ -0.6
ATR-209ENST00000515810 SLAIN2Q9P270 581 aa11.33□□□□□ -0.6
ATR-209ENST00000515810 ELOAQ14241 798 aaKnown RBP11.32□□□□□ -0.6
ATR-209ENST00000515810 OXLD1Q5BKU9 147 aa11.32□□□□□ -0.6
ATR-209ENST00000515810 SLC10A4Q96EP9 437 aa11.32□□□□□ -0.6
ATR-209ENST00000515810 MAP7D1Q3KQU3 841 aa11.31□□□□□ -0.6
ATR-209ENST00000515810 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
ATR-209ENST00000515810 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
ATR-209ENST00000515810 GZF1Q9H116 711 aaPredicted RBP11.31□□□□□ -0.6
ATR-209ENST00000515810 DOLKQ9UPQ8 538 aa11.31□□□□□ -0.6
ATR-209ENST00000515810 KIAA1024Q9UPX6 916 aa11.31□□□□□ -0.6
ATR-209ENST00000515810 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
ATR-209ENST00000515810 ESPNB1AK53 854 aa11.3□□□□□ -0.6
ATR-209ENST00000515810 BRD1O95696 1058 aa11.3□□□□□ -0.6
ATR-209ENST00000515810 RAB15P59190 212 aa11.3□□□□□ -0.6
ATR-209ENST00000515810 PDE4CQ08493 712 aa11.3□□□□□ -0.6
ATR-209ENST00000515810 EML3Q32P44 896 aa11.3□□□□□ -0.6
ATR-209ENST00000515810 OGFOD1Q8N543 542 aa11.3□□□□□ -0.6
ATR-209ENST00000515810 ZBTB24O43167 697 aaPredicted RBP11.29□□□□□ -0.6
ATR-209ENST00000515810 FAM69CQ0P6D2 419 aa11.29□□□□□ -0.6
ATR-209ENST00000515810 LARP1Q6PKG0 1096 aaKnown RBP11.29□□□□□ -0.6
ATR-209ENST00000515810 TRMT44Q8IYL2 757 aaKnown RBP11.29□□□□□ -0.6
ATR-209ENST00000515810 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
ATR-209ENST00000515810 ATP5J2-PTCD1G3V325 749 aa11.28□□□□□ -0.6
ATR-209ENST00000515810 ZBTB7BO15156 539 aaPredicted RBP11.28□□□□□ -0.6
ATR-209ENST00000515810 DKK1O94907 266 aa11.28□□□□□ -0.6
ATR-209ENST00000515810 LIAT1Q6ZQX7 453 aa11.27□□□□□ -0.61
ATR-209ENST00000515810 PCDHB11Q9Y5F2 797 aa11.27□□□□□ -0.61
ATR-209ENST00000515810 LZTS3O60299 673 aaPredicted RBP11.26□□□□□ -0.61
ATR-209ENST00000515810 DPYDQ12882 1025 aa11.26□□□□□ -0.61
ATR-209ENST00000515810 PHLDB3Q6NSJ2 640 aa11.26□□□□□ -0.61
ATR-209ENST00000515810 ANKMY2Q8IV38 441 aa11.26□□□□□ -0.61
ATR-209ENST00000515810 KCTD15Q96SI1 283 aaPredicted RBP11.26□□□□□ -0.61
ATR-209ENST00000515810 NOD1Q9Y239 953 aa11.26□□□□□ -0.61
ATR-209ENST00000515810 FAM200AQ8TCP9 573 aa11.25□□□□□ -0.61
ATR-209ENST00000515810 DNAAF2Q9NVR5 837 aaKnown RBP11.25□□□□□ -0.61
ATR-209ENST00000515810 GTF2IP78347 998 aa11.24□□□□□ -0.61
ATR-209ENST00000515810 NBPF20Q3BBV1 942 aa11.24□□□□□ -0.61
ATR-209ENST00000515810 PCDHGA11Q9Y5H2 935 aa11.24□□□□□ -0.61
ATR-209ENST00000515810 LGR5O75473 907 aa11.23□□□□□ -0.61
ATR-209ENST00000515810 RGS20O76081 388 aa11.23□□□□□ -0.61
ATR-209ENST00000515810 VARSP26640 1264 aaKnown RBP11.23□□□□□ -0.61
ATR-209ENST00000515810 SCTRP47872 440 aa11.23□□□□□ -0.61
ATR-209ENST00000515810 RPIAP49247 311 aa11.23□□□□□ -0.61
ATR-209ENST00000515810 WNT7BP56706 349 aa11.23□□□□□ -0.61
ATR-209ENST00000515810 KCNA1Q09470 495 aa11.23□□□□□ -0.61
ATR-209ENST00000515810 INTS6LQ5JSJ4 861 aaKnown RBP11.23□□□□□ -0.61
ATR-209ENST00000515810 IVNS1ABPQ9Y6Y0 642 aa11.23□□□□□ -0.61
ATR-209ENST00000515810 SCNN1AP37088 669 aa11.22□□□□□ -0.61
ATR-209ENST00000515810 RC3H1Q5TC82 1133 aaKnown RBP11.22□□□□□ -0.61
ATR-209ENST00000515810 RNF20Q5VTR2 975 aa11.22□□□□□ -0.61
ATR-209ENST00000515810 VASH1Q7L8A9 365 aaPredicted RBP11.22□□□□□ -0.61
ATR-209ENST00000515810 TLL2Q9Y6L7 1015 aa11.22□□□□□ -0.61
ATR-209ENST00000515810 ERVH48-1M5A8F1 160 aa11.21□□□□□ -0.61
ATR-209ENST00000515810 SLC19A1P41440 591 aa11.21□□□□□ -0.61
ATR-209ENST00000515810 ARID5BQ14865 1188 aa11.21□□□□□ -0.61
ATR-209ENST00000515810 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
ATR-209ENST00000515810 SFI1A8K8P3 1242 aa11.2□□□□□ -0.62
ATR-209ENST00000515810 LARGE2Q8N3Y3 721 aa11.2□□□□□ -0.62
ATR-209ENST00000515810 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
ATR-209ENST00000515810 TMPRSS4Q9NRS4 437 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms