RNA–Protein interactions for RNA: ENST00000515810.1

ATR-209, Transcript of ATR serine/threonine kinase, humanhuman

TSL 3

Gene ATR, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-209ENST00000515810 AEBP2Q6ZN18 517 aaPredicted RBP28.43■■■□□ 2.14
ATR-209ENST00000515810 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
ATR-209ENST00000515810 PHF23Q9BUL5 403 aaPredicted RBP24.58■■□□□ 1.53
ATR-209ENST00000515810 SENP3Q9H4L4 574 aaPredicted RBP24■■□□□ 1.43
ATR-209ENST00000515810 PLPPR3Q6T4P5 718 aa22.65■■□□□ 1.22
ATR-209ENST00000515810 FOXD1Q16676 465 aa22.32■■□□□ 1.16
ATR-209ENST00000515810 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
ATR-209ENST00000515810 ADRA2BP18089 450 aa21.6■■□□□ 1.05
ATR-209ENST00000515810 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
ATR-209ENST00000515810 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
ATR-209ENST00000515810 MSH5O43196 834 aa20.82■□□□□ 0.92
ATR-209ENST00000515810 KCNA4P22459 653 aa20.3■□□□□ 0.84
ATR-209ENST00000515810 PPP4R3CPQ6ZMV5 832 aa20.01■□□□□ 0.79
ATR-209ENST00000515810 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
ATR-209ENST00000515810 EHMT2Q96KQ7 1210 aa19.6■□□□□ 0.73
ATR-209ENST00000515810 MAPK8IP2Q13387 824 aaPredicted RBP19.57■□□□□ 0.72
ATR-209ENST00000515810 NCBP3Q53F19 620 aaKnown RBP19.49■□□□□ 0.71
ATR-209ENST00000515810 NPM3O75607 178 aaKnown RBP19.39■□□□□ 0.69
ATR-209ENST00000515810 CNKSR2Q8WXI2 1034 aa19.39■□□□□ 0.69
ATR-209ENST00000515810 SLC4A1APQ9BWU0 796 aaKnown RBP19.35■□□□□ 0.69
ATR-209ENST00000515810 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
ATR-209ENST00000515810 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
ATR-209ENST00000515810 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
ATR-209ENST00000515810 HOXD11P31277 338 aaPredicted RBP18.89■□□□□ 0.61
ATR-209ENST00000515810 ZBTB22O15209 634 aa18.77■□□□□ 0.6
ATR-209ENST00000515810 DNAJC5BQ9UF47 199 aa18.68■□□□□ 0.58
ATR-209ENST00000515810 FOXD4L1Q9NU39 408 aa18.38■□□□□ 0.53
ATR-209ENST00000515810 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
ATR-209ENST00000515810 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
ATR-209ENST00000515810 CACNB1Q02641 598 aaPredicted RBP18.06■□□□□ 0.48
ATR-209ENST00000515810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
ATR-209ENST00000515810 MYCNP04198 464 aaPredicted RBP17.79■□□□□ 0.44
ATR-209ENST00000515810 U3KPZ7 1027 aaPredicted RBP17.74■□□□□ 0.43
ATR-209ENST00000515810 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
ATR-209ENST00000515810 ATXN8OSP0DMR3 200 aa17.6■□□□□ 0.41
ATR-209ENST00000515810 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
ATR-209ENST00000515810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
ATR-209ENST00000515810 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
ATR-209ENST00000515810 C1QBPQ07021 282 aaKnown RBP17.44■□□□□ 0.38
ATR-209ENST00000515810 SAMD1Q6SPF0 538 aaPredicted RBP17.44■□□□□ 0.38
ATR-209ENST00000515810 APLP2Q06481 763 aa17.22■□□□□ 0.35
ATR-209ENST00000515810 SPINK5Q9NQ38 1064 aaPredicted RBP17.2■□□□□ 0.34
ATR-209ENST00000515810 FKBP8Q14318 412 aa17.17■□□□□ 0.34
ATR-209ENST00000515810 CAPN15O75808 1086 aa17.07■□□□□ 0.32
ATR-209ENST00000515810 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
ATR-209ENST00000515810 ZNF219Q9P2Y4 722 aaPredicted RBP17.02■□□□□ 0.32
ATR-209ENST00000515810 POLA2Q14181 598 aa16.81■□□□□ 0.28
ATR-209ENST00000515810 DSG3P32926 999 aa16.79■□□□□ 0.28
ATR-209ENST00000515810 ABCB7O75027 752 aa16.78■□□□□ 0.28
ATR-209ENST00000515810 RTN4Q9NQC3 1192 aaKnown RBP16.77■□□□□ 0.28
ATR-209ENST00000515810 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
ATR-209ENST00000515810 AMER1Q5JTC6 1135 aaPredicted RBP16.59■□□□□ 0.25
ATR-209ENST00000515810 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
ATR-209ENST00000515810 FBLN2P98095 1184 aa16.49■□□□□ 0.23
ATR-209ENST00000515810 ZBTB12Q9Y330 459 aaPredicted RBP16.48■□□□□ 0.23
ATR-209ENST00000515810 POTEHQ6S545 545 aa16.38■□□□□ 0.21
ATR-209ENST00000515810 PROM2Q8N271 834 aa16.35■□□□□ 0.21
ATR-209ENST00000515810 OSCARQ8IYS5 282 aa16.24■□□□□ 0.19
ATR-209ENST00000515810 FBXO3Q9UK99 471 aa16.21■□□□□ 0.19
ATR-209ENST00000515810 VASPP50552 380 aaPredicted RBP16.11■□□□□ 0.17
ATR-209ENST00000515810 SPDYE2BA6NHP3 402 aa16.09■□□□□ 0.17
ATR-209ENST00000515810 SPDYE6P0CI01 402 aa16.09■□□□□ 0.17
ATR-209ENST00000515810 SPDYE2Q495Y8 402 aa16.09■□□□□ 0.17
ATR-209ENST00000515810 ZNF692Q9BU19 519 aaPredicted RBP16.05■□□□□ 0.16
ATR-209ENST00000515810 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
ATR-209ENST00000515810 IFNLR1Q8IU57 520 aaPredicted RBP16.02■□□□□ 0.16
ATR-209ENST00000515810 SSUH2Q9Y2M2 353 aa16.02■□□□□ 0.16
ATR-209ENST00000515810 RBM42Q9BTD8 480 aaKnown RBP15.91■□□□□ 0.14
ATR-209ENST00000515810 PABPN1Q86U42 306 aaKnown RBP eCLIP15.86■□□□□ 0.13
ATR-209ENST00000515810 AKT1S1Q96B36 256 aa15.8■□□□□ 0.12
ATR-209ENST00000515810 PKD2Q13563 968 aa15.72■□□□□ 0.11
ATR-209ENST00000515810 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
ATR-209ENST00000515810 STAG3Q9UJ98 1225 aa15.68■□□□□ 0.1
ATR-209ENST00000515810 KLHL34Q8N239 644 aa15.66■□□□□ 0.1
ATR-209ENST00000515810 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
ATR-209ENST00000515810 SPOCK2Q92563 424 aa15.61■□□□□ 0.09
ATR-209ENST00000515810 MIER1Q8N108 512 aa15.6■□□□□ 0.09
ATR-209ENST00000515810 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
ATR-209ENST00000515810 DCAF8L2P0C7V8 631 aa15.54■□□□□ 0.08
ATR-209ENST00000515810 PITPNM1O00562 1244 aa15.49■□□□□ 0.07
ATR-209ENST00000515810 CHRDL2Q6WN34 429 aa15.49■□□□□ 0.07
ATR-209ENST00000515810 CLEC11AQ9Y240 323 aa15.49■□□□□ 0.07
ATR-209ENST00000515810 ECM2O94769 699 aaPredicted RBP15.44■□□□□ 0.06
ATR-209ENST00000515810 PLCB2Q00722 1185 aa15.41■□□□□ 0.06
ATR-209ENST00000515810 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
ATR-209ENST00000515810 RGL2O15211 777 aa15.35■□□□□ 0.05
ATR-209ENST00000515810 NPM1P06748 294 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATR-209ENST00000515810 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
ATR-209ENST00000515810 PLEKHG5O94827 1062 aa15.29■□□□□ 0.04
ATR-209ENST00000515810 CREBZFQ9NS37 354 aa15.28■□□□□ 0.04
ATR-209ENST00000515810 ZBTB47Q9UFB7 747 aaPredicted RBP15.25■□□□□ 0.03
ATR-209ENST00000515810 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
ATR-209ENST00000515810 NUBP1P53384 320 aa15.19■□□□□ 0.02
ATR-209ENST00000515810 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
ATR-209ENST00000515810 MNX1P50219 401 aaPredicted RBP15.16■□□□□ 0.02
ATR-209ENST00000515810 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
ATR-209ENST00000515810 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
ATR-209ENST00000515810 BBXQ8WY36 941 aaPredicted RBP15.14■□□□□ 0.01
ATR-209ENST00000515810 PIP4P2Q8N4L2 257 aa15.11■□□□□ 0.01
ATR-209ENST00000515810 RNF25Q96BH1 459 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms