RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 SPATA31A5Q5VU36 1347 aa35.59■■■■□ 3.29
DDR1-279ENST00000515529 SPATA31A7Q8IWB4 1347 aa35.59■■■■□ 3.29
DDR1-279ENST00000515529 RGS12O14924 1447 aa35.59■■■■□ 3.29
DDR1-279ENST00000515529 ABCC6O95255 1503 aa35.59■■■■□ 3.29
DDR1-279ENST00000515529 AXIN2Q9Y2T1 843 aa35.58■■■■□ 3.29
DDR1-279ENST00000515529 LTN1O94822 1766 aa35.57■■■■□ 3.28
DDR1-279ENST00000515529 COL18A1P39060 1754 aa35.57■■■■□ 3.28
DDR1-279ENST00000515529 A0A0G2JS52 829 aa35.57■■■■□ 3.28
DDR1-279ENST00000515529 CSB-PGBD3P0DP91 1061 aa35.57■■■■□ 3.28
DDR1-279ENST00000515529 MYT1Q01538 1121 aa35.57■■■■□ 3.28
DDR1-279ENST00000515529 LARP1Q6PKG0 1096 aaKnown RBP35.57■■■■□ 3.28
DDR1-279ENST00000515529 NSD2O96028 1365 aa35.56■■■■□ 3.28
DDR1-279ENST00000515529 AMPHP49418 695 aa35.56■■■■□ 3.28
DDR1-279ENST00000515529 USP35Q9P2H5 1018 aa35.55■■■■□ 3.28
DDR1-279ENST00000515529 MAP3K19Q56UN5 1328 aa35.55■■■■□ 3.28
DDR1-279ENST00000515529 SPATA31A1Q5TZJ5 1347 aa35.55■■■■□ 3.28
DDR1-279ENST00000515529 FBLN1P23142 703 aa35.53■■■■□ 3.28
DDR1-279ENST00000515529 FAM98CQ17RN3 349 aaKnown RBP35.53■■■■□ 3.28
DDR1-279ENST00000515529 TOM1L2Q6ZVM7 507 aa35.53■■■■□ 3.28
DDR1-279ENST00000515529 RRS1Q15050 365 aaKnown RBP35.52■■■■□ 3.28
DDR1-279ENST00000515529 CRB1P82279 1406 aa35.51■■■■□ 3.28
DDR1-279ENST00000515529 IP6K1Q92551 441 aa35.51■■■■□ 3.28
DDR1-279ENST00000515529 WDR17Q8IZU2 1322 aa35.51■■■■□ 3.27
DDR1-279ENST00000515529 SOCS7O14512 581 aa35.5■■■■□ 3.27
DDR1-279ENST00000515529 SEPT12Q8IYM1 358 aa35.49■■■■□ 3.27
DDR1-279ENST00000515529 BLMP54132 1417 aaPredicted RBP35.49■■■■□ 3.27
DDR1-279ENST00000515529 TCP11L2Q8N4U5 519 aa35.48■■■■□ 3.27
DDR1-279ENST00000515529 RTL1A6NKG5 1358 aa35.48■■■■□ 3.27
DDR1-279ENST00000515529 RGPD5Q99666 1765 aa35.48■■■■□ 3.27
DDR1-279ENST00000515529 ANKRD26Q9UPS8 1709 aa35.47■■■■□ 3.27
DDR1-279ENST00000515529 MORC1Q86VD1 984 aa35.47■■■■□ 3.27
DDR1-279ENST00000515529 ONECUT3O60422 494 aaPredicted RBP35.46■■■■□ 3.27
DDR1-279ENST00000515529 HOXC9P31274 260 aa35.46■■■■□ 3.27
DDR1-279ENST00000515529 TNNT2P45379 298 aaPredicted RBP35.46■■■■□ 3.27
DDR1-279ENST00000515529 ANKRD24Q8TF21 1146 aa35.46■■■■□ 3.27
DDR1-279ENST00000515529 THRAP3Q9Y2W1 955 aaKnown RBP35.46■■■■□ 3.27
DDR1-279ENST00000515529 ERBB3P21860 1342 aa35.44■■■■□ 3.26
DDR1-279ENST00000515529 AMER1Q5JTC6 1135 aaPredicted RBP35.43■■■■□ 3.26
DDR1-279ENST00000515529 LTV1Q96GA3 475 aaPredicted RBP35.43■■■■□ 3.26
DDR1-279ENST00000515529 PPM1GO15355 546 aaPredicted RBP35.42■■■■□ 3.26
DDR1-279ENST00000515529 PER1O15534 1290 aaPredicted RBP35.42■■■■□ 3.26
DDR1-279ENST00000515529 BARGINQ6ZT62 677 aa35.42■■■■□ 3.26
DDR1-279ENST00000515529 CARD10Q9BWT7 1032 aa35.41■■■■□ 3.26
DDR1-279ENST00000515529 NLRP2Q9NX02 1062 aa35.41■■■■□ 3.26
DDR1-279ENST00000515529 FLT4P35916 1363 aa35.4■■■■□ 3.26
DDR1-279ENST00000515529 KIF24Q5T7B8 1368 aa35.4■■■■□ 3.26
DDR1-279ENST00000515529 EMILIN1Q9Y6C2 1016 aa35.39■■■■□ 3.26
DDR1-279ENST00000515529 CC2D1BQ5T0F9 858 aaKnown RBP35.37■■■■□ 3.25
DDR1-279ENST00000515529 SMG6Q86US8 1419 aaKnown RBP35.37■■■■□ 3.25
DDR1-279ENST00000515529 KRT27Q7Z3Y8 459 aa35.35■■■■□ 3.25
DDR1-279ENST00000515529 CNGB1Q14028 1251 aaPredicted RBP35.34■■■■□ 3.25
DDR1-279ENST00000515529 POLKQ9UBT6 870 aa35.33■■■■□ 3.25
DDR1-279ENST00000515529 INSRP06213 1382 aa35.33■■■■□ 3.25
DDR1-279ENST00000515529 THSD7AQ9UPZ6 1657 aa35.33■■■■□ 3.25
DDR1-279ENST00000515529 HSP90AB2PQ58FF8 381 aa35.32■■■■□ 3.24
DDR1-279ENST00000515529 CDCA7Q9BWT1 371 aaPredicted RBP35.32■■■■□ 3.24
DDR1-279ENST00000515529 NPC1L1Q9UHC9 1359 aa35.32■■■■□ 3.24
DDR1-279ENST00000515529 MAP2P11137 1827 aaKnown RBP35.3■■■■□ 3.24
DDR1-279ENST00000515529 PEAK1Q9H792 1746 aa35.3■■■■□ 3.24
DDR1-279ENST00000515529 FAM208AQ9UK61 1670 aaKnown RBP35.29■■■■□ 3.24
DDR1-279ENST00000515529 BRWD3Q6RI45 1802 aa35.29■■■■□ 3.24
DDR1-279ENST00000515529 PDE3BQ13370 1112 aa35.28■■■■□ 3.24
DDR1-279ENST00000515529 DDB1Q16531 1140 aa35.23■■■■□ 3.23
DDR1-279ENST00000515529 IL2RBP14784 551 aa35.21■■■■□ 3.23
DDR1-279ENST00000515529 PARP4Q9UKK3 1724 aaKnown RBP35.2■■■■□ 3.23
DDR1-279ENST00000515529 DDX10Q13206 875 aaKnown RBP35.2■■■■□ 3.23
DDR1-279ENST00000515529 WNK3Q9BYP7 1800 aa35.2■■■■□ 3.23
DDR1-279ENST00000515529 DISP2A7MBM2 1401 aa35.19■■■■□ 3.22
DDR1-279ENST00000515529 UPF1Q92900 1129 aaKnown RBP eCLIP35.19■■■■□ 3.22
DDR1-279ENST00000515529 EXOC5O00471 708 aa35.18■■■■□ 3.22
DDR1-279ENST00000515529 NBPF6Q5VWK0 638 aa35.18■■■■□ 3.22
DDR1-279ENST00000515529 NBPF4Q96M43 638 aa35.18■■■■□ 3.22
DDR1-279ENST00000515529 FAM182BQ5T319 152 aa35.15■■■■□ 3.22
DDR1-279ENST00000515529 USHBP1Q8N6Y0 703 aa35.15■■■■□ 3.22
DDR1-279ENST00000515529 LRRC37A3O60309 1634 aa35.14■■■■□ 3.22
DDR1-279ENST00000515529 MTHFSP49914 203 aa35.13■■■■□ 3.21
DDR1-279ENST00000515529 EIF4A2Q14240 407 aaKnown RBP35.13■■■■□ 3.21
DDR1-279ENST00000515529 FAM196AQ6ZSG2 479 aa35.13■■■■□ 3.21
DDR1-279ENST00000515529 RGPD2P0DJD1 1756 aa35.13■■■■□ 3.21
DDR1-279ENST00000515529 RAPGEF4Q8WZA2 1011 aa35.12■■■■□ 3.21
DDR1-279ENST00000515529 TNS2Q63HR2 1409 aa35.1■■■■□ 3.21
DDR1-279ENST00000515529 ZNF316A6NFI3 1004 aaPredicted RBP35.1■■■■□ 3.21
DDR1-279ENST00000515529 CCDC125Q86Z20 511 aa35.09■■■■□ 3.21
DDR1-279ENST00000515529 SF3B2Q13435 895 aaKnown RBP35.08■■■■□ 3.21
DDR1-279ENST00000515529 TATP17735 454 aaPredicted RBP35.07■■■■□ 3.2
DDR1-279ENST00000515529 EYA1Q99502 592 aa35.07■■■■□ 3.2
DDR1-279ENST00000515529 OVOS2A0A0G2JMS6 1433 aa35.06■■■■□ 3.2
DDR1-279ENST00000515529 MARCH10Q8NA82 808 aaPredicted RBP35.03■■■■□ 3.2
DDR1-279ENST00000515529 MEGF6O75095 1541 aa35.02■■■■□ 3.2
DDR1-279ENST00000515529 CFAP53Q96M91 514 aa35.01■■■■□ 3.2
DDR1-279ENST00000515529 ZCRB1Q8TBF4 217 aaKnown RBP35■■■■□ 3.19
DDR1-279ENST00000515529 PPP2R1AP30153 589 aa34.99■■■■□ 3.19
DDR1-279ENST00000515529 DDX54Q8TDD1 881 aaKnown RBP34.99■■■■□ 3.19
DDR1-279ENST00000515529 NCAPD2Q15021 1401 aa34.98■■■■□ 3.19
DDR1-279ENST00000515529 DIAPH1O60610 1272 aaKnown RBP34.98■■■■□ 3.19
DDR1-279ENST00000515529 IGSF1Q8N6C5 1336 aa34.98■■■■□ 3.19
DDR1-279ENST00000515529 IL13P35225 146 aa34.97■■■■□ 3.19
DDR1-279ENST00000515529 EP400Q96L91 3159 aa34.97■■■■□ 3.19
DDR1-279ENST00000515529 TRIM37O94972 964 aa34.96■■■■□ 3.19
DDR1-279ENST00000515529 PARD3Q8TEW0 1356 aa34.95■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms