RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, humanhuman

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-209ENST00000515332 NBPF1Q3BBV0 1214 aa35.41■■■■□ 3.26
SGMS2-209ENST00000515332 ATF5Q9Y2D1 282 aaPredicted RBP35.41■■■■□ 3.26
SGMS2-209ENST00000515332 BRD4O60885 1362 aaPredicted RBP35.4■■■■□ 3.26
SGMS2-209ENST00000515332 SLIT3O75094 1523 aa35.4■■■■□ 3.26
SGMS2-209ENST00000515332 KIAA1210Q9ULL0 1709 aa35.4■■■■□ 3.26
SGMS2-209ENST00000515332 ZNF784Q8NCA9 323 aaPredicted RBP35.38■■■■□ 3.25
SGMS2-209ENST00000515332 AXIN2Q9Y2T1 843 aa35.38■■■■□ 3.25
SGMS2-209ENST00000515332 USP6P35125 1406 aa35.38■■■■□ 3.25
SGMS2-209ENST00000515332 WNK3Q9BYP7 1800 aa35.37■■■■□ 3.25
SGMS2-209ENST00000515332 COL18A1P39060 1754 aa35.37■■■■□ 3.25
SGMS2-209ENST00000515332 WDR17Q8IZU2 1322 aa35.36■■■■□ 3.25
SGMS2-209ENST00000515332 CABP1Q9NZU7 370 aa35.36■■■■□ 3.25
SGMS2-209ENST00000515332 CENPJQ9HC77 1338 aaPredicted RBP35.35■■■■□ 3.25
SGMS2-209ENST00000515332 STK32BQ9NY57 414 aa35.35■■■■□ 3.25
SGMS2-209ENST00000515332 UTRNP46939 3433 aa35.34■■■■□ 3.25
SGMS2-209ENST00000515332 AKAP12Q02952 1782 aa35.33■■■■□ 3.25
SGMS2-209ENST00000515332 BCL9O00512 1426 aa35.33■■■■□ 3.25
SGMS2-209ENST00000515332 TXNRD1Q16881 649 aa35.33■■■■□ 3.25
SGMS2-209ENST00000515332 CDCA7Q9BWT1 371 aaPredicted RBP35.32■■■■□ 3.24
SGMS2-209ENST00000515332 FHDC1Q9C0D6 1143 aaPredicted RBP35.32■■■■□ 3.24
SGMS2-209ENST00000515332 PIK3C2AO00443 1686 aa35.3■■■■□ 3.24
SGMS2-209ENST00000515332 SLC15A2Q16348 729 aa35.3■■■■□ 3.24
SGMS2-209ENST00000515332 SYT17Q9BSW7 474 aa35.3■■■■□ 3.24
SGMS2-209ENST00000515332 CPSF1Q10570 1443 aaKnown RBP35.29■■■■□ 3.24
SGMS2-209ENST00000515332 CSB-PGBD3P0DP91 1061 aa35.26■■■■□ 3.24
SGMS2-209ENST00000515332 QRICH2Q9H0J4 1663 aa35.26■■■■□ 3.23
SGMS2-209ENST00000515332 ARHGEF25Q86VW2 580 aa35.25■■■■□ 3.23
SGMS2-209ENST00000515332 CARD10Q9BWT7 1032 aa35.25■■■■□ 3.23
SGMS2-209ENST00000515332 RGPD5Q99666 1765 aa35.24■■■■□ 3.23
SGMS2-209ENST00000515332 SOX12O15370 315 aa35.24■■■■□ 3.23
SGMS2-209ENST00000515332 MTFR1LQ9H019 292 aa35.24■■■■□ 3.23
SGMS2-209ENST00000515332 EXOC5O00471 708 aa35.22■■■■□ 3.23
SGMS2-209ENST00000515332 SGIP1Q9BQI5 828 aa35.21■■■■□ 3.23
SGMS2-209ENST00000515332 SENP3-EIF4A1A0A087X0R7 540 aa35.18■■■■□ 3.22
SGMS2-209ENST00000515332 KCNH5Q8NCM2 988 aa35.18■■■■□ 3.22
SGMS2-209ENST00000515332 TTC21BQ7Z4L5 1316 aa35.16■■■■□ 3.22
SGMS2-209ENST00000515332 CHD4Q14839 1912 aa35.15■■■■□ 3.22
SGMS2-209ENST00000515332 TNS2Q63HR2 1409 aa35.15■■■■□ 3.22
SGMS2-209ENST00000515332 ACSBG1Q96GR2 724 aa35.14■■■■□ 3.22
SGMS2-209ENST00000515332 ARXQ96QS3 562 aa35.14■■■■□ 3.22
SGMS2-209ENST00000515332 C1QTNF8P60827 252 aa35.13■■■■□ 3.21
SGMS2-209ENST00000515332 CCDC7Q96M83 1385 aa35.13■■■■□ 3.21
SGMS2-209ENST00000515332 NHSQ6T4R5 1651 aa35.12■■■■□ 3.21
SGMS2-209ENST00000515332 EVC2Q86UK5 1308 aa35.11■■■■□ 3.21
SGMS2-209ENST00000515332 TRPM1Q7Z4N2 1603 aa35.11■■■■□ 3.21
SGMS2-209ENST00000515332 NFAT5O94916 1531 aa35.1■■■■□ 3.21
SGMS2-209ENST00000515332 ZNF692Q9BU19 519 aaPredicted RBP35.09■■■■□ 3.21
SGMS2-209ENST00000515332 PAPPAQ13219 1627 aa35.07■■■■□ 3.21
SGMS2-209ENST00000515332 TTC21AQ8NDW8 1320 aa35.06■■■■□ 3.2
SGMS2-209ENST00000515332 MAP3K5Q99683 1374 aa35.05■■■■□ 3.2
SGMS2-209ENST00000515332 ZNF827Q17R98 1081 aa35.04■■■■□ 3.2
SGMS2-209ENST00000515332 ABCC6O95255 1503 aa35.03■■■■□ 3.2
SGMS2-209ENST00000515332 GPR162Q16538 588 aa35.01■■■■□ 3.2
SGMS2-209ENST00000515332 NLRP2Q9NX02 1062 aa35■■■■□ 3.19
SGMS2-209ENST00000515332 BTAF1O14981 1849 aa34.99■■■■□ 3.19
SGMS2-209ENST00000515332 KTN1Q86UP2 1357 aaKnown RBP34.99■■■■□ 3.19
SGMS2-209ENST00000515332 LRRC4BQ9NT99 713 aa34.98■■■■□ 3.19
SGMS2-209ENST00000515332 IL2RBP14784 551 aa34.96■■■■□ 3.19
SGMS2-209ENST00000515332 KLHL34Q8N239 644 aa34.96■■■■□ 3.19
SGMS2-209ENST00000515332 ERBB3P21860 1342 aa34.96■■■■□ 3.19
SGMS2-209ENST00000515332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.93■■■■□ 3.18
SGMS2-209ENST00000515332 PELP1Q8IZL8 1130 aaKnown RBP34.91■■■■□ 3.18
SGMS2-209ENST00000515332 L3MBTL2Q969R5 705 aa34.91■■■■□ 3.18
SGMS2-209ENST00000515332 AKT1S1Q96B36 256 aa34.91■■■■□ 3.18
SGMS2-209ENST00000515332 KAT6BQ8WYB5 2073 aa34.9■■■■□ 3.18
SGMS2-209ENST00000515332 GIGYF1O75420 1035 aaPredicted RBP34.9■■■■□ 3.18
SGMS2-209ENST00000515332 ANKRD24Q8TF21 1146 aa34.88■■■■□ 3.17
SGMS2-209ENST00000515332 MON2Q7Z3U7 1717 aa34.88■■■■□ 3.17
SGMS2-209ENST00000515332 USP31Q70CQ4 1352 aa34.87■■■■□ 3.17
SGMS2-209ENST00000515332 GOLGB1Q14789 3259 aaKnown RBP34.87■■■■□ 3.17
SGMS2-209ENST00000515332 POLD1P28340 1107 aa34.87■■■■□ 3.17
SGMS2-209ENST00000515332 NME9Q86XW9 330 aa34.87■■■■□ 3.17
SGMS2-209ENST00000515332 SLC16A10Q8TF71 515 aa34.87■■■■□ 3.17
SGMS2-209ENST00000515332 LTN1O94822 1766 aa34.86■■■■□ 3.17
SGMS2-209ENST00000515332 PNPLA7Q6ZV29 1317 aa34.84■■■■□ 3.17
SGMS2-209ENST00000515332 ROCK2O75116 1388 aaKnown RBP34.84■■■■□ 3.17
SGMS2-209ENST00000515332 SLC27A3Q5K4L6 730 aa34.83■■■■□ 3.17
SGMS2-209ENST00000515332 QSER1Q2KHR3 1735 aa34.83■■■■□ 3.17
SGMS2-209ENST00000515332 USP54Q70EL1 1684 aa34.82■■■■□ 3.17
SGMS2-209ENST00000515332 NLGN2Q8NFZ4 835 aa34.82■■■■□ 3.16
SGMS2-209ENST00000515332 KCNQ4P56696 695 aa34.81■■■■□ 3.16
SGMS2-209ENST00000515332 DDX54Q8TDD1 881 aaKnown RBP34.81■■■■□ 3.16
SGMS2-209ENST00000515332 COL24A1Q17RW2 1714 aa34.81■■■■□ 3.16
SGMS2-209ENST00000515332 TFCP2L1Q9NZI6 479 aa34.8■■■■□ 3.16
SGMS2-209ENST00000515332 IFFO2Q5TF58 517 aa34.79■■■■□ 3.16
SGMS2-209ENST00000515332 SBNO2Q9Y2G9 1366 aa34.78■■■■□ 3.16
SGMS2-209ENST00000515332 SHANK3Q9BYB0 1731 aa34.78■■■■□ 3.16
SGMS2-209ENST00000515332 TUBGCP6Q96RT7 1819 aa34.77■■■■□ 3.16
SGMS2-209ENST00000515332 CD163L1Q9NR16 1453 aa34.76■■■■□ 3.15
SGMS2-209ENST00000515332 CEP350Q5VT06 3117 aa34.74■■■■□ 3.15
SGMS2-209ENST00000515332 SYTL4Q96C24 671 aaPredicted RBP34.74■■■■□ 3.15
SGMS2-209ENST00000515332 TMC1Q8TDI8 760 aa34.72■■■■□ 3.15
SGMS2-209ENST00000515332 YBX3P16989 372 aaKnown RBP eCLIP34.71■■■■□ 3.15
SGMS2-209ENST00000515332 PRIM1P49642 420 aaKnown RBP34.71■■■■□ 3.15
SGMS2-209ENST00000515332 LTV1Q96GA3 475 aaPredicted RBP34.71■■■■□ 3.15
SGMS2-209ENST00000515332 SIN3AQ96ST3 1273 aa34.7■■■■□ 3.15
SGMS2-209ENST00000515332 HDGFL2Q7Z4V5 671 aaPredicted RBP34.68■■■■□ 3.14
SGMS2-209ENST00000515332 ANKRD36BQ8N2N9 1353 aa34.67■■■■□ 3.14
SGMS2-209ENST00000515332 IP6K1Q92551 441 aa34.67■■■■□ 3.14
SGMS2-209ENST00000515332 SLC12A5Q9H2X9 1139 aa34.67■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms