RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 SPATA31A7Q8IWB4 1347 aa19.17■□□□□ 0.66
USP46-209ENST00000514536 USP54Q70EL1 1684 aa19.16■□□□□ 0.66
USP46-209ENST00000514536 KNSTRNQ9Y448 316 aa19.16■□□□□ 0.66
USP46-209ENST00000514536 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
USP46-209ENST00000514536 NRAPQ86VF7 1730 aa19.15■□□□□ 0.66
USP46-209ENST00000514536 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
USP46-209ENST00000514536 MAP3K19Q56UN5 1328 aa19.14■□□□□ 0.65
USP46-209ENST00000514536 SPATA31A1Q5TZJ5 1347 aa19.14■□□□□ 0.65
USP46-209ENST00000514536 LMO7Q8WWI1 1683 aa19.14■□□□□ 0.65
USP46-209ENST00000514536 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.65
USP46-209ENST00000514536 GLI3P10071 1580 aa19.14■□□□□ 0.65
USP46-209ENST00000514536 COL5A2P05997 1499 aaPredicted RBP19.13■□□□□ 0.65
USP46-209ENST00000514536 ONECUT3O60422 494 aaPredicted RBP19.13■□□□□ 0.65
USP46-209ENST00000514536 CSB-PGBD3P0DP91 1061 aa19.13■□□□□ 0.65
USP46-209ENST00000514536 AMPHP49418 695 aa19.13■□□□□ 0.65
USP46-209ENST00000514536 SEPT12Q8IYM1 358 aa19.13■□□□□ 0.65
USP46-209ENST00000514536 IP6K1Q92551 441 aa19.13■□□□□ 0.65
USP46-209ENST00000514536 TOM1L2Q6ZVM7 507 aa19.12■□□□□ 0.65
USP46-209ENST00000514536 COL18A1P39060 1754 aa19.11■□□□□ 0.65
USP46-209ENST00000514536 A0A0G2JS52 829 aa19.11■□□□□ 0.65
USP46-209ENST00000514536 PER1O15534 1290 aaPredicted RBP19.11■□□□□ 0.65
USP46-209ENST00000514536 MYT1Q01538 1121 aa19.11■□□□□ 0.65
USP46-209ENST00000514536 WDR17Q8IZU2 1322 aa19.11■□□□□ 0.65
USP46-209ENST00000514536 TNNT2P45379 298 aaPredicted RBP19.1■□□□□ 0.65
USP46-209ENST00000514536 HOXC9P31274 260 aa19.1■□□□□ 0.65
USP46-209ENST00000514536 TCP11L2Q8N4U5 519 aa19.1■□□□□ 0.65
USP46-209ENST00000514536 KIF20BQ96Q89 1820 aa19.09■□□□□ 0.65
USP46-209ENST00000514536 AMER1Q5JTC6 1135 aaPredicted RBP19.09■□□□□ 0.65
USP46-209ENST00000514536 ANKRD24Q8TF21 1146 aa19.09■□□□□ 0.65
USP46-209ENST00000514536 LTV1Q96GA3 475 aaPredicted RBP19.09■□□□□ 0.65
USP46-209ENST00000514536 MORC1Q86VD1 984 aa19.08■□□□□ 0.65
USP46-209ENST00000514536 CRB1P82279 1406 aa19.08■□□□□ 0.64
USP46-209ENST00000514536 NSD2O96028 1365 aa19.07■□□□□ 0.64
USP46-209ENST00000514536 BARGINQ6ZT62 677 aa19.07■□□□□ 0.64
USP46-209ENST00000514536 THRAP3Q9Y2W1 955 aaKnown RBP19.07■□□□□ 0.64
USP46-209ENST00000514536 EMILIN1Q9Y6C2 1016 aa19.07■□□□□ 0.64
USP46-209ENST00000514536 PPM1GO15355 546 aaPredicted RBP19.06■□□□□ 0.64
USP46-209ENST00000514536 CARD10Q9BWT7 1032 aa19.06■□□□□ 0.64
USP46-209ENST00000514536 NLRP2Q9NX02 1062 aa19.06■□□□□ 0.64
USP46-209ENST00000514536 ERBB3P21860 1342 aa19.06■□□□□ 0.64
USP46-209ENST00000514536 ABCC6O95255 1503 aa19.06■□□□□ 0.64
USP46-209ENST00000514536 LTN1O94822 1766 aa19.05■□□□□ 0.64
USP46-209ENST00000514536 BLMP54132 1417 aaPredicted RBP19.05■□□□□ 0.64
USP46-209ENST00000514536 CNGB1Q14028 1251 aaPredicted RBP19.05■□□□□ 0.64
USP46-209ENST00000514536 HSP90AB2PQ58FF8 381 aa19.05■□□□□ 0.64
USP46-209ENST00000514536 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
USP46-209ENST00000514536 POLKQ9UBT6 870 aa19.05■□□□□ 0.64
USP46-209ENST00000514536 RGPD5Q99666 1765 aa19.04■□□□□ 0.64
USP46-209ENST00000514536 KRT27Q7Z3Y8 459 aa19.03■□□□□ 0.64
USP46-209ENST00000514536 RTL1A6NKG5 1358 aa19.03■□□□□ 0.64
USP46-209ENST00000514536 FLT4P35916 1363 aa19.01■□□□□ 0.63
USP46-209ENST00000514536 INSRP06213 1382 aa19■□□□□ 0.63
USP46-209ENST00000514536 KIF24Q5T7B8 1368 aa19■□□□□ 0.63
USP46-209ENST00000514536 EP400Q96L91 3159 aa18.99■□□□□ 0.63
USP46-209ENST00000514536 FAM182BQ5T319 152 aa18.98■□□□□ 0.63
USP46-209ENST00000514536 NPC1L1Q9UHC9 1359 aa18.98■□□□□ 0.63
USP46-209ENST00000514536 DDX10Q13206 875 aaKnown RBP18.98■□□□□ 0.63
USP46-209ENST00000514536 PDE3BQ13370 1112 aa18.98■□□□□ 0.63
USP46-209ENST00000514536 NBPF6Q5VWK0 638 aa18.98■□□□□ 0.63
USP46-209ENST00000514536 NBPF4Q96M43 638 aa18.98■□□□□ 0.63
USP46-209ENST00000514536 CDCA7Q9BWT1 371 aaPredicted RBP18.98■□□□□ 0.63
USP46-209ENST00000514536 PEAK1Q9H792 1746 aa18.97■□□□□ 0.63
USP46-209ENST00000514536 ANKRD26Q9UPS8 1709 aa18.97■□□□□ 0.63
USP46-209ENST00000514536 THSD7AQ9UPZ6 1657 aa18.96■□□□□ 0.63
USP46-209ENST00000514536 DDB1Q16531 1140 aa18.96■□□□□ 0.63
USP46-209ENST00000514536 IL2RBP14784 551 aa18.95■□□□□ 0.62
USP46-209ENST00000514536 CCDC125Q86Z20 511 aa18.95■□□□□ 0.62
USP46-209ENST00000514536 USHBP1Q8N6Y0 703 aa18.95■□□□□ 0.62
USP46-209ENST00000514536 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
USP46-209ENST00000514536 BRWD3Q6RI45 1802 aa18.94■□□□□ 0.62
USP46-209ENST00000514536 MAP2P11137 1827 aaKnown RBP18.93■□□□□ 0.62
USP46-209ENST00000514536 EXOC5O00471 708 aa18.93■□□□□ 0.62
USP46-209ENST00000514536 MTHFSP49914 203 aa18.93■□□□□ 0.62
USP46-209ENST00000514536 DISP2A7MBM2 1401 aa18.93■□□□□ 0.62
USP46-209ENST00000514536 EIF4A2Q14240 407 aaKnown RBP18.92■□□□□ 0.62
USP46-209ENST00000514536 EYA1Q99502 592 aa18.91■□□□□ 0.62
USP46-209ENST00000514536 FAM196AQ6ZSG2 479 aa18.9■□□□□ 0.62
USP46-209ENST00000514536 MARCH10Q8NA82 808 aaPredicted RBP18.89■□□□□ 0.62
USP46-209ENST00000514536 ZNF316A6NFI3 1004 aaPredicted RBP18.89■□□□□ 0.61
USP46-209ENST00000514536 RAPGEF4Q8WZA2 1011 aa18.88■□□□□ 0.61
USP46-209ENST00000514536 SRCAPQ6ZRS2 3230 aa18.87■□□□□ 0.61
USP46-209ENST00000514536 PARP4Q9UKK3 1724 aaKnown RBP18.87■□□□□ 0.61
USP46-209ENST00000514536 FAM208AQ9UK61 1670 aaKnown RBP18.86■□□□□ 0.61
USP46-209ENST00000514536 TATP17735 454 aaPredicted RBP18.86■□□□□ 0.61
USP46-209ENST00000514536 RGPD2P0DJD1 1756 aa18.86■□□□□ 0.61
USP46-209ENST00000514536 IL13P35225 146 aa18.85■□□□□ 0.61
USP46-209ENST00000514536 TRIM37O94972 964 aa18.85■□□□□ 0.61
USP46-209ENST00000514536 PPP2R1AP30153 589 aa18.85■□□□□ 0.61
USP46-209ENST00000514536 SF3B2Q13435 895 aaKnown RBP18.85■□□□□ 0.61
USP46-209ENST00000514536 ZCRB1Q8TBF4 217 aaKnown RBP18.85■□□□□ 0.61
USP46-209ENST00000514536 DDX54Q8TDD1 881 aaKnown RBP18.85■□□□□ 0.61
USP46-209ENST00000514536 LRRC37A3O60309 1634 aa18.84■□□□□ 0.61
USP46-209ENST00000514536 DEFB132Q7Z7B7 95 aa18.84■□□□□ 0.61
USP46-209ENST00000514536 MEGF6O75095 1541 aa18.84■□□□□ 0.61
USP46-209ENST00000514536 TNS2Q63HR2 1409 aa18.83■□□□□ 0.61
USP46-209ENST00000514536 OVOS2A0A0G2JMS6 1433 aa18.82■□□□□ 0.6
USP46-209ENST00000514536 WNK3Q9BYP7 1800 aa18.82■□□□□ 0.6
USP46-209ENST00000514536 IGSF1Q8N6C5 1336 aa18.82■□□□□ 0.6
USP46-209ENST00000514536 DIAPH1O60610 1272 aaKnown RBP18.81■□□□□ 0.6
USP46-209ENST00000514536 NCAPD2Q15021 1401 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms