RNA–Protein interactions for RNA: ENST00000514231.1

PDE4D-221, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-221ENST00000514231 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
PDE4D-221ENST00000514231 CCDC116Q8IYX3 515 aa11.71□□□□□ -0.53
PDE4D-221ENST00000514231 ITPKCQ96DU7 683 aa11.71□□□□□ -0.53
PDE4D-221ENST00000514231 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
PDE4D-221ENST00000514231 KIFC2Q96AC6 838 aa11.7□□□□□ -0.54
PDE4D-221ENST00000514231 PRM3Q9NNZ6 103 aa11.7□□□□□ -0.54
PDE4D-221ENST00000514231 FBXO45P0C2W1 286 aa11.69□□□□□ -0.54
PDE4D-221ENST00000514231 NBPF20Q3BBV1 942 aa11.69□□□□□ -0.54
PDE4D-221ENST00000514231 TRIM46Q7Z4K8 759 aa11.69□□□□□ -0.54
PDE4D-221ENST00000514231 TRIM47Q96LD4 638 aa11.69□□□□□ -0.54
PDE4D-221ENST00000514231 DHX9Q08211 1270 aaKnown RBP11.68□□□□□ -0.54
PDE4D-221ENST00000514231 TMEM132AQ24JP5 1023 aa11.68□□□□□ -0.54
PDE4D-221ENST00000514231 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
PDE4D-221ENST00000514231 GPR37L1O60883 481 aa11.67□□□□□ -0.54
PDE4D-221ENST00000514231 MCCD1P59942 119 aaPredicted RBP11.67□□□□□ -0.54
PDE4D-221ENST00000514231 NR1H3Q13133 447 aa11.67□□□□□ -0.54
PDE4D-221ENST00000514231 BMP1P13497 986 aa11.66□□□□□ -0.54
PDE4D-221ENST00000514231 PPP1R26Q5T8A7 1209 aaPredicted RBP11.66□□□□□ -0.54
PDE4D-221ENST00000514231 MRPL14Q6P1L8 145 aaKnown RBP11.66□□□□□ -0.54
PDE4D-221ENST00000514231 PGPEP1Q9NXJ5 209 aa11.66□□□□□ -0.54
PDE4D-221ENST00000514231 INTS6LQ5JSJ4 861 aaKnown RBP11.65□□□□□ -0.54
PDE4D-221ENST00000514231 ESPNB1AK53 854 aa11.64□□□□□ -0.55
PDE4D-221ENST00000514231 SNRPBP14678 240 aaKnown RBP11.64□□□□□ -0.55
PDE4D-221ENST00000514231 SCARF1Q14162 830 aa11.64□□□□□ -0.55
PDE4D-221ENST00000514231 ZNF592Q92610 1267 aa11.64□□□□□ -0.55
PDE4D-221ENST00000514231 ZNF330Q9Y3S2 320 aaPredicted RBP11.64□□□□□ -0.55
PDE4D-221ENST00000514231 SEPT12Q8IYM1 358 aa11.63□□□□□ -0.55
PDE4D-221ENST00000514231 ZNF775Q96BV0 537 aaPredicted RBP11.63□□□□□ -0.55
PDE4D-221ENST00000514231 ZFP42Q96MM3 310 aa11.63□□□□□ -0.55
PDE4D-221ENST00000514231 TBC1D2BQ9UPU7 963 aa11.63□□□□□ -0.55
PDE4D-221ENST00000514231 PCDHB9Q9Y5E1 797 aa11.63□□□□□ -0.55
PDE4D-221ENST00000514231 MEIOBQ8N635 442 aa11.61□□□□□ -0.55
PDE4D-221ENST00000514231 MCM6Q14566 821 aa11.6□□□□□ -0.55
PDE4D-221ENST00000514231 Q6ZVU0 165 aa11.6□□□□□ -0.55
PDE4D-221ENST00000514231 CCDC125Q86Z20 511 aa11.6□□□□□ -0.55
PDE4D-221ENST00000514231 PURBQ96QR8 312 aaKnown RBP11.6□□□□□ -0.55
PDE4D-221ENST00000514231 UPP2O95045 317 aa11.59□□□□□ -0.55
PDE4D-221ENST00000514231 TRIM52Q96A61 297 aa11.59□□□□□ -0.55
PDE4D-221ENST00000514231 ERVH48-1M5A8F1 160 aa11.58□□□□□ -0.56
PDE4D-221ENST00000514231 GIGYF1O75420 1035 aaPredicted RBP11.58□□□□□ -0.56
PDE4D-221ENST00000514231 TSEN34Q9BSV6 310 aaKnown RBP11.58□□□□□ -0.56
PDE4D-221ENST00000514231 IRF5Q13568 498 aa11.57□□□□□ -0.56
PDE4D-221ENST00000514231 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
PDE4D-221ENST00000514231 GDPD2Q9HCC8 539 aa11.57□□□□□ -0.56
PDE4D-221ENST00000514231 TMPRSS4Q9NRS4 437 aa11.57□□□□□ -0.56
PDE4D-221ENST00000514231 RAB15P59190 212 aa11.56□□□□□ -0.56
PDE4D-221ENST00000514231 CBLBQ13191 982 aa11.56□□□□□ -0.56
PDE4D-221ENST00000514231 RNF20Q5VTR2 975 aa11.56□□□□□ -0.56
PDE4D-221ENST00000514231 BMP2P12643 396 aa11.55□□□□□ -0.56
PDE4D-221ENST00000514231 FLIIQ13045 1269 aa11.55□□□□□ -0.56
PDE4D-221ENST00000514231 C6orf118Q5T5N4 469 aa11.54□□□□□ -0.56
PDE4D-221ENST00000514231 ZNF784Q8NCA9 323 aaPredicted RBP11.54□□□□□ -0.56
PDE4D-221ENST00000514231 LILRA1O75019 489 aa11.53□□□□□ -0.56
PDE4D-221ENST00000514231 ABL2P42684 1182 aa11.53□□□□□ -0.56
PDE4D-221ENST00000514231 EIF4G2P78344 907 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDE4D-221ENST00000514231 WASHC4Q2M389 1173 aa11.53□□□□□ -0.56
PDE4D-221ENST00000514231 CEP126Q9P2H0 1117 aa11.52□□□□□ -0.57
PDE4D-221ENST00000514231 COG6Q9Y2V7 657 aa11.51□□□□□ -0.57
PDE4D-221ENST00000514231 ADD1P35611 737 aaKnown RBP11.5□□□□□ -0.57
PDE4D-221ENST00000514231 SPINT1O43278 529 aa11.49□□□□□ -0.57
PDE4D-221ENST00000514231 SOS2Q07890 1332 aaPredicted RBP11.49□□□□□ -0.57
PDE4D-221ENST00000514231 VAC14Q08AM6 782 aa11.48□□□□□ -0.57
PDE4D-221ENST00000514231 TREML4Q6UXN2 200 aa11.48□□□□□ -0.57
PDE4D-221ENST00000514231 ADH1AP07327 375 aa11.47□□□□□ -0.57
PDE4D-221ENST00000514231 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
PDE4D-221ENST00000514231 CYLDQ9NQC7 956 aa11.47□□□□□ -0.57
PDE4D-221ENST00000514231 TERTO14746 1132 aaKnown RBP11.46□□□□□ -0.57
PDE4D-221ENST00000514231 MAN1A2O60476 641 aa11.46□□□□□ -0.57
PDE4D-221ENST00000514231 ERVK-9P63128 1117 aa11.46□□□□□ -0.57
PDE4D-221ENST00000514231 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
PDE4D-221ENST00000514231 TTLL8A6PVC2 850 aa11.45□□□□□ -0.58
PDE4D-221ENST00000514231 RAD21O60216 631 aa11.45□□□□□ -0.58
PDE4D-221ENST00000514231 RELBQ01201 579 aa11.45□□□□□ -0.58
PDE4D-221ENST00000514231 NFX1Q12986 1120 aaKnown RBP11.45□□□□□ -0.58
PDE4D-221ENST00000514231 LCE2AQ5TA79 106 aaPredicted RBP11.45□□□□□ -0.58
PDE4D-221ENST00000514231 CC2D2BQ6DHV5 1058 aa11.45□□□□□ -0.58
PDE4D-221ENST00000514231 NPAS3Q8IXF0 933 aa11.45□□□□□ -0.58
PDE4D-221ENST00000514231 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
PDE4D-221ENST00000514231 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
PDE4D-221ENST00000514231 SOX11P35716 441 aa11.44□□□□□ -0.58
PDE4D-221ENST00000514231 PTGIRP43119 386 aa11.44□□□□□ -0.58
PDE4D-221ENST00000514231 PHTF2Q8N3S3 785 aa11.44□□□□□ -0.58
PDE4D-221ENST00000514231 PCDHB11Q9Y5F2 797 aa11.44□□□□□ -0.58
PDE4D-221ENST00000514231 WFS1O76024 890 aa11.43□□□□□ -0.58
PDE4D-221ENST00000514231 UBTFP17480 764 aaKnown RBP11.43□□□□□ -0.58
PDE4D-221ENST00000514231 WWC1Q8IX03 1113 aa11.43□□□□□ -0.58
PDE4D-221ENST00000514231 POM121Q96HA1 1249 aa11.43□□□□□ -0.58
PDE4D-221ENST00000514231 ZNF395Q9H8N7 513 aaPredicted RBP11.43□□□□□ -0.58
PDE4D-221ENST00000514231 DNMT3LQ9UJW3 386 aa11.42□□□□□ -0.58
PDE4D-221ENST00000514231 ATP5J2-PTCD1G3V325 749 aa11.41□□□□□ -0.58
PDE4D-221ENST00000514231 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
PDE4D-221ENST00000514231 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.41□□□□□ -0.58
PDE4D-221ENST00000514231 SLFNL1Q499Z3 407 aa11.41□□□□□ -0.58
PDE4D-221ENST00000514231 INSM2Q96T92 566 aaPredicted RBP11.41□□□□□ -0.58
PDE4D-221ENST00000514231 CTSOP43234 321 aaPredicted RBP11.4□□□□□ -0.58
PDE4D-221ENST00000514231 SLC16A10Q8TF71 515 aa11.4□□□□□ -0.58
PDE4D-221ENST00000514231 CCDC85AQ96PX6 553 aaPredicted RBP11.4□□□□□ -0.58
PDE4D-221ENST00000514231 ESF1Q9H501 851 aaKnown RBP11.4□□□□□ -0.58
PDE4D-221ENST00000514231 CHIC2Q9UKJ5 165 aa11.4□□□□□ -0.58
PDE4D-221ENST00000514231 SCTRP47872 440 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms