RNA–Protein interactions for RNA: ENST00000513821.5

SGCA-209, Transcript of sarcoglycan alpha, humanhuman

TSL 2

Gene SGCA, Length 1,090 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-209ENST00000513821 CSB-PGBD3P0DP91 1061 aa19.19■□□□□ 0.66
SGCA-209ENST00000513821 PDE3BQ13370 1112 aa19.19■□□□□ 0.66
SGCA-209ENST00000513821 CRB1P82279 1406 aa19.18■□□□□ 0.66
SGCA-209ENST00000513821 WDR17Q8IZU2 1322 aa19.18■□□□□ 0.66
SGCA-209ENST00000513821 LMO7Q8WWI1 1683 aa19.17■□□□□ 0.66
SGCA-209ENST00000513821 COL5A2P05997 1499 aaPredicted RBP19.17■□□□□ 0.66
SGCA-209ENST00000513821 FYB1O15117 783 aa19.17■□□□□ 0.66
SGCA-209ENST00000513821 FAM196AQ6ZSG2 479 aa19.16■□□□□ 0.66
SGCA-209ENST00000513821 CDCA7Q9BWT1 371 aaPredicted RBP19.16■□□□□ 0.66
SGCA-209ENST00000513821 CARD10Q9BWT7 1032 aa19.16■□□□□ 0.66
SGCA-209ENST00000513821 BRWD3Q6RI45 1802 aa19.16■□□□□ 0.66
SGCA-209ENST00000513821 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
SGCA-209ENST00000513821 POLR3GLQ9BT43 218 aa19.15■□□□□ 0.66
SGCA-209ENST00000513821 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
SGCA-209ENST00000513821 NFAT5O94916 1531 aa19.14■□□□□ 0.65
SGCA-209ENST00000513821 IP6K1Q92551 441 aa19.13■□□□□ 0.65
SGCA-209ENST00000513821 COL18A1P39060 1754 aa19.13■□□□□ 0.65
SGCA-209ENST00000513821 OVOS2A0A0J9YW53 1432 aa19.12■□□□□ 0.65
SGCA-209ENST00000513821 OVOS2Q6IE36 1432 aa19.12■□□□□ 0.65
SGCA-209ENST00000513821 CARD14Q9BXL6 1004 aa19.12■□□□□ 0.65
SGCA-209ENST00000513821 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
SGCA-209ENST00000513821 USP54Q70EL1 1684 aa19.11■□□□□ 0.65
SGCA-209ENST00000513821 ABCC6O95255 1503 aa19.11■□□□□ 0.65
SGCA-209ENST00000513821 AMPHP49418 695 aa19.11■□□□□ 0.65
SGCA-209ENST00000513821 DDB1Q16531 1140 aa19.1■□□□□ 0.65
SGCA-209ENST00000513821 FAM182BQ5T319 152 aa19.1■□□□□ 0.65
SGCA-209ENST00000513821 NLRP2Q9NX02 1062 aa19.1■□□□□ 0.65
SGCA-209ENST00000513821 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
SGCA-209ENST00000513821 THSD7AQ9UPZ6 1657 aa19.09■□□□□ 0.65
SGCA-209ENST00000513821 EXOC5O00471 708 aa19.09■□□□□ 0.65
SGCA-209ENST00000513821 BAG6P46379 1132 aa19.09■□□□□ 0.65
SGCA-209ENST00000513821 ANKRD24Q8TF21 1146 aa19.09■□□□□ 0.65
SGCA-209ENST00000513821 ERBB3P21860 1342 aa19.08■□□□□ 0.65
SGCA-209ENST00000513821 CGNL1Q0VF96 1302 aa19.08■□□□□ 0.65
SGCA-209ENST00000513821 MAP3K19Q56UN5 1328 aa19.07■□□□□ 0.64
SGCA-209ENST00000513821 FBLN1P23142 703 aa19.05■□□□□ 0.64
SGCA-209ENST00000513821 HOXC9P31274 260 aa19.05■□□□□ 0.64
SGCA-209ENST00000513821 DEFB132Q7Z7B7 95 aa19.05■□□□□ 0.64
SGCA-209ENST00000513821 PANK3Q9H999 370 aa19.05■□□□□ 0.64
SGCA-209ENST00000513821 RGPD5Q99666 1765 aa19.04■□□□□ 0.64
SGCA-209ENST00000513821 TRIM37O94972 964 aa19.04■□□□□ 0.64
SGCA-209ENST00000513821 NSD3Q9BZ95 1437 aa19.04■□□□□ 0.64
SGCA-209ENST00000513821 LTV1Q96GA3 475 aaPredicted RBP19.03■□□□□ 0.64
SGCA-209ENST00000513821 IL2RBP14784 551 aa19.02■□□□□ 0.64
SGCA-209ENST00000513821 RRS1Q15050 365 aaKnown RBP19.02■□□□□ 0.64
SGCA-209ENST00000513821 APBA3O96018 575 aa19.01■□□□□ 0.63
SGCA-209ENST00000513821 KIF24Q5T7B8 1368 aa19.01■□□□□ 0.63
SGCA-209ENST00000513821 EP400Q96L91 3159 aa19.01■□□□□ 0.63
SGCA-209ENST00000513821 LTN1O94822 1766 aa19.01■□□□□ 0.63
SGCA-209ENST00000513821 RTL1A6NKG5 1358 aa19■□□□□ 0.63
SGCA-209ENST00000513821 EN1Q05925 392 aaPredicted RBP18.99■□□□□ 0.63
SGCA-209ENST00000513821 MARCH10Q8NA82 808 aaPredicted RBP18.99■□□□□ 0.63
SGCA-209ENST00000513821 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
SGCA-209ENST00000513821 PARP4Q9UKK3 1724 aaKnown RBP18.99■□□□□ 0.63
SGCA-209ENST00000513821 MYOM1P52179 1685 aa18.98■□□□□ 0.63
SGCA-209ENST00000513821 OVOS2A0A0G2JMS6 1433 aa18.98■□□□□ 0.63
SGCA-209ENST00000513821 DISP2A7MBM2 1401 aa18.98■□□□□ 0.63
SGCA-209ENST00000513821 INSRP06213 1382 aa18.96■□□□□ 0.63
SGCA-209ENST00000513821 HSP90AB2PQ58FF8 381 aa18.96■□□□□ 0.63
SGCA-209ENST00000513821 BCL11BQ9C0K0 894 aaPredicted RBP18.96■□□□□ 0.63
SGCA-209ENST00000513821 FLT4P35916 1363 aa18.95■□□□□ 0.62
SGCA-209ENST00000513821 SMG6Q86US8 1419 aaKnown RBP18.95■□□□□ 0.62
SGCA-209ENST00000513821 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
SGCA-209ENST00000513821 CAMKK2Q96RR4 588 aa18.95■□□□□ 0.62
SGCA-209ENST00000513821 KIF7Q2M1P5 1343 aa18.95■□□□□ 0.62
SGCA-209ENST00000513821 RGPD1P0DJD0 1748 aa18.94■□□□□ 0.62
SGCA-209ENST00000513821 BCL9O00512 1426 aa18.94■□□□□ 0.62
SGCA-209ENST00000513821 EMILIN1Q9Y6C2 1016 aa18.94■□□□□ 0.62
SGCA-209ENST00000513821 KIF20BQ96Q89 1820 aa18.94■□□□□ 0.62
SGCA-209ENST00000513821 NSD2O96028 1365 aa18.93■□□□□ 0.62
SGCA-209ENST00000513821 EZH2Q15910 746 aaKnown RBP18.93■□□□□ 0.62
SGCA-209ENST00000513821 NBPF6Q5VWK0 638 aa18.93■□□□□ 0.62
SGCA-209ENST00000513821 MORC1Q86VD1 984 aa18.93■□□□□ 0.62
SGCA-209ENST00000513821 NBPF4Q96M43 638 aa18.93■□□□□ 0.62
SGCA-209ENST00000513821 POLKQ9UBT6 870 aa18.93■□□□□ 0.62
SGCA-209ENST00000513821 WASHC2AQ641Q2 1341 aa18.93■□□□□ 0.62
SGCA-209ENST00000513821 PARD3Q8TEW0 1356 aa18.93■□□□□ 0.62
SGCA-209ENST00000513821 PLSCR1O15162 318 aa18.92■□□□□ 0.62
SGCA-209ENST00000513821 RAPGEF4Q8WZA2 1011 aa18.92■□□□□ 0.62
SGCA-209ENST00000513821 ZCRB1Q8TBF4 217 aaKnown RBP18.91■□□□□ 0.62
SGCA-209ENST00000513821 TNNT2P45379 298 aaPredicted RBP18.9■□□□□ 0.62
SGCA-209ENST00000513821 DDX54Q8TDD1 881 aaKnown RBP18.9■□□□□ 0.62
SGCA-209ENST00000513821 TNS2Q63HR2 1409 aa18.9■□□□□ 0.62
SGCA-209ENST00000513821 LRRC37A3O60309 1634 aa18.89■□□□□ 0.62
SGCA-209ENST00000513821 FAM208AQ9UK61 1670 aaKnown RBP18.89■□□□□ 0.61
SGCA-209ENST00000513821 TATP17735 454 aaPredicted RBP18.89■□□□□ 0.61
SGCA-209ENST00000513821 NBPF14Q5TI25 921 aa18.89■□□□□ 0.61
SGCA-209ENST00000513821 WNK3Q9BYP7 1800 aa18.87■□□□□ 0.61
SGCA-209ENST00000513821 MAP2P11137 1827 aaKnown RBP18.86■□□□□ 0.61
SGCA-209ENST00000513821 PER1O15534 1290 aaPredicted RBP18.86■□□□□ 0.61
SGCA-209ENST00000513821 PEAK1Q9H792 1746 aa18.86■□□□□ 0.61
SGCA-209ENST00000513821 AMER1Q5JTC6 1135 aaPredicted RBP18.85■□□□□ 0.61
SGCA-209ENST00000513821 USHBP1Q8N6Y0 703 aa18.85■□□□□ 0.61
SGCA-209ENST00000513821 TNS1Q9HBL0 1735 aaKnown RBP18.84■□□□□ 0.61
SGCA-209ENST00000513821 KCNQ2O43526 872 aa18.84■□□□□ 0.61
SGCA-209ENST00000513821 ACSBG1Q96GR2 724 aa18.84■□□□□ 0.61
SGCA-209ENST00000513821 EYA1Q99502 592 aa18.84■□□□□ 0.61
SGCA-209ENST00000513821 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
SGCA-209ENST00000513821 PTF1AQ7RTS3 328 aa18.83■□□□□ 0.6
SGCA-209ENST00000513821 SBF2Q86WG5 1849 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms