RNA–Protein interactions for RNA: ENST00000513664.1

PDGFC-209, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-209ENST00000513664 AMER1Q5JTC6 1135 aaPredicted RBP12.92□□□□□ -0.34
PDGFC-209ENST00000513664 CAMTA1Q9Y6Y1 1673 aa12.92□□□□□ -0.34
PDGFC-209ENST00000513664 AMPHP49418 695 aa12.91□□□□□ -0.34
PDGFC-209ENST00000513664 POTEAQ6S8J7 498 aa12.91□□□□□ -0.34
PDGFC-209ENST00000513664 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
PDGFC-209ENST00000513664 IP6K1Q92551 441 aa12.91□□□□□ -0.34
PDGFC-209ENST00000513664 GJD4Q96KN9 370 aaPredicted RBP12.91□□□□□ -0.34
PDGFC-209ENST00000513664 COL18A1P39060 1754 aa12.91□□□□□ -0.34
PDGFC-209ENST00000513664 COL5A2P05997 1499 aaPredicted RBP12.91□□□□□ -0.34
PDGFC-209ENST00000513664 CDK12Q9NYV4 1490 aaPredicted RBP12.91□□□□□ -0.34
PDGFC-209ENST00000513664 MAP3K19Q56UN5 1328 aa12.9□□□□□ -0.34
PDGFC-209ENST00000513664 ZNF316A6NFI3 1004 aaPredicted RBP12.9□□□□□ -0.34
PDGFC-209ENST00000513664 CCDC9Q9Y3X0 531 aaKnown RBP12.9□□□□□ -0.34
PDGFC-209ENST00000513664 STRN4Q9NRL3 753 aa12.89□□□□□ -0.35
PDGFC-209ENST00000513664 WDR17Q8IZU2 1322 aa12.88□□□□□ -0.35
PDGFC-209ENST00000513664 CRB1P82279 1406 aa12.88□□□□□ -0.35
PDGFC-209ENST00000513664 RRS1Q15050 365 aaKnown RBP12.88□□□□□ -0.35
PDGFC-209ENST00000513664 AXIN2Q9Y2T1 843 aa12.88□□□□□ -0.35
PDGFC-209ENST00000513664 THRAP3Q9Y2W1 955 aaKnown RBP12.88□□□□□ -0.35
PDGFC-209ENST00000513664 FLT4P35916 1363 aa12.88□□□□□ -0.35
PDGFC-209ENST00000513664 SMG6Q86US8 1419 aaKnown RBP12.88□□□□□ -0.35
PDGFC-209ENST00000513664 ERBB3P21860 1342 aa12.88□□□□□ -0.35
PDGFC-209ENST00000513664 SPATA31A5Q5VU36 1347 aa12.88□□□□□ -0.35
PDGFC-209ENST00000513664 SPATA31A7Q8IWB4 1347 aa12.88□□□□□ -0.35
PDGFC-209ENST00000513664 CSB-PGBD3P0DP91 1061 aa12.87□□□□□ -0.35
PDGFC-209ENST00000513664 HOXC9P31274 260 aa12.87□□□□□ -0.35
PDGFC-209ENST00000513664 CC2D1BQ5T0F9 858 aaKnown RBP12.87□□□□□ -0.35
PDGFC-209ENST00000513664 SPATA31A1Q5TZJ5 1347 aa12.87□□□□□ -0.35
PDGFC-209ENST00000513664 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
PDGFC-209ENST00000513664 INSRP06213 1382 aa12.86□□□□□ -0.35
PDGFC-209ENST00000513664 DDX10Q13206 875 aaKnown RBP12.86□□□□□ -0.35
PDGFC-209ENST00000513664 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
PDGFC-209ENST00000513664 TOM1L2Q6ZVM7 507 aa12.86□□□□□ -0.35
PDGFC-209ENST00000513664 ANKRD24Q8TF21 1146 aa12.86□□□□□ -0.35
PDGFC-209ENST00000513664 PPM1GO15355 546 aaPredicted RBP12.85□□□□□ -0.35
PDGFC-209ENST00000513664 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
PDGFC-209ENST00000513664 FBLN1P23142 703 aa12.85□□□□□ -0.35
PDGFC-209ENST00000513664 TNNT2P45379 298 aaPredicted RBP12.85□□□□□ -0.35
PDGFC-209ENST00000513664 BARGINQ6ZT62 677 aa12.85□□□□□ -0.35
PDGFC-209ENST00000513664 TCP11L2Q8N4U5 519 aa12.85□□□□□ -0.35
PDGFC-209ENST00000513664 CARD10Q9BWT7 1032 aa12.85□□□□□ -0.35
PDGFC-209ENST00000513664 POLKQ9UBT6 870 aa12.85□□□□□ -0.35
PDGFC-209ENST00000513664 GLI3P10071 1580 aa12.85□□□□□ -0.35
PDGFC-209ENST00000513664 RGPD5Q99666 1765 aa12.84□□□□□ -0.35
PDGFC-209ENST00000513664 MAP2P11137 1827 aaKnown RBP12.84□□□□□ -0.35
PDGFC-209ENST00000513664 CDCA7Q9BWT1 371 aaPredicted RBP12.84□□□□□ -0.35
PDGFC-209ENST00000513664 EMILIN1Q9Y6C2 1016 aa12.84□□□□□ -0.35
PDGFC-209ENST00000513664 FAM98CQ17RN3 349 aaKnown RBP12.82□□□□□ -0.36
PDGFC-209ENST00000513664 HSP90AB2PQ58FF8 381 aa12.82□□□□□ -0.36
PDGFC-209ENST00000513664 NLRP2Q9NX02 1062 aa12.82□□□□□ -0.36
PDGFC-209ENST00000513664 USP35Q9P2H5 1018 aa12.82□□□□□ -0.36
PDGFC-209ENST00000513664 PEAK1Q9H792 1746 aa12.82□□□□□ -0.36
PDGFC-209ENST00000513664 RGS12O14924 1447 aa12.81□□□□□ -0.36
PDGFC-209ENST00000513664 LTV1Q96GA3 475 aaPredicted RBP12.81□□□□□ -0.36
PDGFC-209ENST00000513664 A0A0G2JS52 829 aa12.8□□□□□ -0.36
PDGFC-209ENST00000513664 MTHFSP49914 203 aa12.8□□□□□ -0.36
PDGFC-209ENST00000513664 MYT1Q01538 1121 aa12.8□□□□□ -0.36
PDGFC-209ENST00000513664 RALBP1Q15311 655 aa12.8□□□□□ -0.36
PDGFC-209ENST00000513664 SEPT12Q8IYM1 358 aa12.8□□□□□ -0.36
PDGFC-209ENST00000513664 ILDR2Q71H61 639 aa12.79□□□□□ -0.36
PDGFC-209ENST00000513664 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
PDGFC-209ENST00000513664 PARD3Q8TEW0 1356 aa12.79□□□□□ -0.36
PDGFC-209ENST00000513664 CNGB1Q14028 1251 aaPredicted RBP12.78□□□□□ -0.36
PDGFC-209ENST00000513664 CFAP53Q96M91 514 aa12.78□□□□□ -0.36
PDGFC-209ENST00000513664 PARP4Q9UKK3 1724 aaKnown RBP12.77□□□□□ -0.36
PDGFC-209ENST00000513664 IL2RBP14784 551 aa12.77□□□□□ -0.37
PDGFC-209ENST00000513664 PDE3BQ13370 1112 aa12.77□□□□□ -0.37
PDGFC-209ENST00000513664 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
PDGFC-209ENST00000513664 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
PDGFC-209ENST00000513664 PPP2R1AP30153 589 aa12.76□□□□□ -0.37
PDGFC-209ENST00000513664 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
PDGFC-209ENST00000513664 DDB1Q16531 1140 aa12.76□□□□□ -0.37
PDGFC-209ENST00000513664 NBPF6Q5VWK0 638 aa12.76□□□□□ -0.37
PDGFC-209ENST00000513664 KRT27Q7Z3Y8 459 aa12.76□□□□□ -0.37
PDGFC-209ENST00000513664 NBPF4Q96M43 638 aa12.76□□□□□ -0.37
PDGFC-209ENST00000513664 DISP2A7MBM2 1401 aa12.76□□□□□ -0.37
PDGFC-209ENST00000513664 EXOC5O00471 708 aa12.75□□□□□ -0.37
PDGFC-209ENST00000513664 DIAPH1O60610 1272 aaKnown RBP12.75□□□□□ -0.37
PDGFC-209ENST00000513664 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
PDGFC-209ENST00000513664 NCAPD2Q15021 1401 aa12.74□□□□□ -0.37
PDGFC-209ENST00000513664 EYA1Q99502 592 aa12.74□□□□□ -0.37
PDGFC-209ENST00000513664 IGSF1Q8N6C5 1336 aa12.73□□□□□ -0.37
PDGFC-209ENST00000513664 MYBBP1AQ9BQG0 1328 aaKnown RBP12.73□□□□□ -0.37
PDGFC-209ENST00000513664 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
PDGFC-209ENST00000513664 IL13P35225 146 aa12.73□□□□□ -0.37
PDGFC-209ENST00000513664 NUDCQ9Y266 331 aa12.73□□□□□ -0.37
PDGFC-209ENST00000513664 EP400Q96L91 3159 aa12.73□□□□□ -0.37
PDGFC-209ENST00000513664 LRRC37A3O60309 1634 aa12.73□□□□□ -0.37
PDGFC-209ENST00000513664 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
PDGFC-209ENST00000513664 BRWD3Q6RI45 1802 aa12.72□□□□□ -0.37
PDGFC-209ENST00000513664 RGPD2P0DJD1 1756 aa12.72□□□□□ -0.37
PDGFC-209ENST00000513664 PRKRIP1Q9H875 184 aaPredicted RBP12.72□□□□□ -0.37
PDGFC-209ENST00000513664 OVOS2A0A0G2JMS6 1433 aa12.71□□□□□ -0.37
PDGFC-209ENST00000513664 FAM196AQ6ZSG2 479 aa12.71□□□□□ -0.37
PDGFC-209ENST00000513664 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.71□□□□□ -0.37
PDGFC-209ENST00000513664 COL3A1P02461 1466 aaPredicted RBP12.71□□□□□ -0.38
PDGFC-209ENST00000513664 RGPD1P0DJD0 1748 aa12.71□□□□□ -0.38
PDGFC-209ENST00000513664 SOCS7O14512 581 aa12.7□□□□□ -0.38
PDGFC-209ENST00000513664 ANP32CO43423 234 aa12.7□□□□□ -0.38
PDGFC-209ENST00000513664 CCDC125Q86Z20 511 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms