RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 MORC1Q86VD1 984 aa21.2■□□□□ 0.98
POLR2J3-218ENST00000513506 PLCH1Q4KWH8 1693 aa21.2■□□□□ 0.98
POLR2J3-218ENST00000513506 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
POLR2J3-218ENST00000513506 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
POLR2J3-218ENST00000513506 NRAPQ86VF7 1730 aa21.19■□□□□ 0.98
POLR2J3-218ENST00000513506 QTRT2Q9H974 415 aaKnown RBP21.19■□□□□ 0.98
POLR2J3-218ENST00000513506 POLKQ9UBT6 870 aa21.19■□□□□ 0.98
POLR2J3-218ENST00000513506 FBLN1P23142 703 aa21.18■□□□□ 0.98
POLR2J3-218ENST00000513506 SOX12O15370 315 aa21.17■□□□□ 0.98
POLR2J3-218ENST00000513506 ONECUT3O60422 494 aaPredicted RBP21.17■□□□□ 0.98
POLR2J3-218ENST00000513506 HOXC9P31274 260 aa21.17■□□□□ 0.98
POLR2J3-218ENST00000513506 FLT4P35916 1363 aa21.16■□□□□ 0.98
POLR2J3-218ENST00000513506 RRS1Q15050 365 aaKnown RBP21.16■□□□□ 0.98
POLR2J3-218ENST00000513506 INSRP06213 1382 aa21.15■□□□□ 0.98
POLR2J3-218ENST00000513506 ERBB3P21860 1342 aa21.15■□□□□ 0.98
POLR2J3-218ENST00000513506 SPATA31A5Q5VU36 1347 aa21.15■□□□□ 0.98
POLR2J3-218ENST00000513506 SPATA31A7Q8IWB4 1347 aa21.15■□□□□ 0.98
POLR2J3-218ENST00000513506 WDR17Q8IZU2 1322 aa21.15■□□□□ 0.98
POLR2J3-218ENST00000513506 RBM6P78332 1123 aaKnown RBP21.15■□□□□ 0.98
POLR2J3-218ENST00000513506 GJD4Q96KN9 370 aaPredicted RBP21.15■□□□□ 0.98
POLR2J3-218ENST00000513506 CDK12Q9NYV4 1490 aaPredicted RBP21.13■□□□□ 0.97
POLR2J3-218ENST00000513506 AMPHP49418 695 aa21.13■□□□□ 0.97
POLR2J3-218ENST00000513506 CC2D1BQ5T0F9 858 aaKnown RBP21.13■□□□□ 0.97
POLR2J3-218ENST00000513506 EMILIN1Q9Y6C2 1016 aa21.13■□□□□ 0.97
POLR2J3-218ENST00000513506 PARD3Q8TEW0 1356 aa21.12■□□□□ 0.97
POLR2J3-218ENST00000513506 SPATA31A1Q5TZJ5 1347 aa21.12■□□□□ 0.97
POLR2J3-218ENST00000513506 LTN1O94822 1766 aa21.12■□□□□ 0.97
POLR2J3-218ENST00000513506 CRB1P82279 1406 aa21.12■□□□□ 0.97
POLR2J3-218ENST00000513506 RXRBP28702 533 aa21.11■□□□□ 0.97
POLR2J3-218ENST00000513506 EVA1CP58658 441 aa21.11■□□□□ 0.97
POLR2J3-218ENST00000513506 LARP1Q6PKG0 1096 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-218ENST00000513506 CARD10Q9BWT7 1032 aa21.11■□□□□ 0.97
POLR2J3-218ENST00000513506 THRAP3Q9Y2W1 955 aaKnown RBP21.11■□□□□ 0.97
POLR2J3-218ENST00000513506 PEAK1Q9H792 1746 aa21.1■□□□□ 0.97
POLR2J3-218ENST00000513506 HSP90AB2PQ58FF8 381 aa21.09■□□□□ 0.97
POLR2J3-218ENST00000513506 BARGINQ6ZT62 677 aa21.09■□□□□ 0.97
POLR2J3-218ENST00000513506 ANKRD24Q8TF21 1146 aa21.09■□□□□ 0.97
POLR2J3-218ENST00000513506 GLI3P10071 1580 aa21.09■□□□□ 0.97
POLR2J3-218ENST00000513506 TNNT2P45379 298 aaPredicted RBP21.08■□□□□ 0.97
POLR2J3-218ENST00000513506 RALBP1Q15311 655 aa21.08■□□□□ 0.97
POLR2J3-218ENST00000513506 STRN4Q9NRL3 753 aa21.08■□□□□ 0.97
POLR2J3-218ENST00000513506 ZBTB7CA1YPR0 619 aa21.07■□□□□ 0.96
POLR2J3-218ENST00000513506 NCAPD2Q15021 1401 aa21.06■□□□□ 0.96
POLR2J3-218ENST00000513506 TCP11L2Q8N4U5 519 aa21.06■□□□□ 0.96
POLR2J3-218ENST00000513506 MTHFSP49914 203 aa21.05■□□□□ 0.96
POLR2J3-218ENST00000513506 MAP2P11137 1827 aaKnown RBP21.05■□□□□ 0.96
POLR2J3-218ENST00000513506 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
POLR2J3-218ENST00000513506 TOM1L2Q6ZVM7 507 aa21.03■□□□□ 0.96
POLR2J3-218ENST00000513506 CDCA7Q9BWT1 371 aaPredicted RBP21.03■□□□□ 0.96
POLR2J3-218ENST00000513506 RGPD5Q99666 1765 aa21.02■□□□□ 0.96
POLR2J3-218ENST00000513506 DISP2A7MBM2 1401 aa21.02■□□□□ 0.96
POLR2J3-218ENST00000513506 FAM208AQ9UK61 1670 aaKnown RBP21.02■□□□□ 0.95
POLR2J3-218ENST00000513506 PPM1GO15355 546 aaPredicted RBP21.01■□□□□ 0.95
POLR2J3-218ENST00000513506 CSB-PGBD3P0DP91 1061 aa21.01■□□□□ 0.95
POLR2J3-218ENST00000513506 EIF4A2Q14240 407 aaKnown RBP21.01■□□□□ 0.95
POLR2J3-218ENST00000513506 NBPF6Q5VWK0 638 aa21.01■□□□□ 0.95
POLR2J3-218ENST00000513506 NBPF4Q96M43 638 aa21.01■□□□□ 0.95
POLR2J3-218ENST00000513506 PRKRIP1Q9H875 184 aaPredicted RBP21.01■□□□□ 0.95
POLR2J3-218ENST00000513506 PLEKHG2Q9H7P9 1386 aa21■□□□□ 0.95
POLR2J3-218ENST00000513506 IL13P35225 146 aa21■□□□□ 0.95
POLR2J3-218ENST00000513506 NLRP2Q9NX02 1062 aa21■□□□□ 0.95
POLR2J3-218ENST00000513506 CCDC9Q9Y3X0 531 aaKnown RBP21■□□□□ 0.95
POLR2J3-218ENST00000513506 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
POLR2J3-218ENST00000513506 RGS12O14924 1447 aa20.99■□□□□ 0.95
POLR2J3-218ENST00000513506 COL3A1P02461 1466 aaPredicted RBP20.99■□□□□ 0.95
POLR2J3-218ENST00000513506 FAM98CQ17RN3 349 aaKnown RBP20.98■□□□□ 0.95
POLR2J3-218ENST00000513506 IGSF1Q8N6C5 1336 aa20.98■□□□□ 0.95
POLR2J3-218ENST00000513506 SEPT12Q8IYM1 358 aa20.97■□□□□ 0.95
POLR2J3-218ENST00000513506 LTV1Q96GA3 475 aaPredicted RBP20.97■□□□□ 0.95
POLR2J3-218ENST00000513506 EYA1Q99502 592 aa20.97■□□□□ 0.95
POLR2J3-218ENST00000513506 ILDR2Q71H61 639 aa20.96■□□□□ 0.95
POLR2J3-218ENST00000513506 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
POLR2J3-218ENST00000513506 KDRP35968 1356 aa20.95■□□□□ 0.94
POLR2J3-218ENST00000513506 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
POLR2J3-218ENST00000513506 DIAPH1O60610 1272 aaKnown RBP20.93■□□□□ 0.94
POLR2J3-218ENST00000513506 IL2RBP14784 551 aa20.93■□□□□ 0.94
POLR2J3-218ENST00000513506 CFAP53Q96M91 514 aa20.92■□□□□ 0.94
POLR2J3-218ENST00000513506 RGPD1P0DJD0 1748 aa20.92■□□□□ 0.94
POLR2J3-218ENST00000513506 CNGB1Q14028 1251 aaPredicted RBP20.91■□□□□ 0.94
POLR2J3-218ENST00000513506 PARP4Q9UKK3 1724 aaKnown RBP20.91■□□□□ 0.94
POLR2J3-218ENST00000513506 OVOS2A0A0G2JMS6 1433 aa20.9■□□□□ 0.94
POLR2J3-218ENST00000513506 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.9■□□□□ 0.94
POLR2J3-218ENST00000513506 BCL9O00512 1426 aa20.89■□□□□ 0.94
POLR2J3-218ENST00000513506 KRT27Q7Z3Y8 459 aa20.88■□□□□ 0.93
POLR2J3-218ENST00000513506 MEGF6O75095 1541 aa20.88■□□□□ 0.93
POLR2J3-218ENST00000513506 TNS2Q63HR2 1409 aa20.87■□□□□ 0.93
POLR2J3-218ENST00000513506 DDB1Q16531 1140 aa20.87■□□□□ 0.93
POLR2J3-218ENST00000513506 WNK3Q9BYP7 1800 aa20.87■□□□□ 0.93
POLR2J3-218ENST00000513506 EXOC5O00471 708 aa20.86■□□□□ 0.93
POLR2J3-218ENST00000513506 USHBP1Q8N6Y0 703 aa20.86■□□□□ 0.93
POLR2J3-218ENST00000513506 RAPGEF4Q8WZA2 1011 aa20.86■□□□□ 0.93
POLR2J3-218ENST00000513506 RGPD2P0DJD1 1756 aa20.86■□□□□ 0.93
POLR2J3-218ENST00000513506 ANP32CO43423 234 aa20.84■□□□□ 0.93
POLR2J3-218ENST00000513506 TATP17735 454 aaPredicted RBP20.84■□□□□ 0.93
POLR2J3-218ENST00000513506 NUDCQ9Y266 331 aa20.84■□□□□ 0.93
POLR2J3-218ENST00000513506 LRRC37A3O60309 1634 aa20.84■□□□□ 0.93
POLR2J3-218ENST00000513506 EP400Q96L91 3159 aa20.83■□□□□ 0.93
POLR2J3-218ENST00000513506 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
POLR2J3-218ENST00000513506 ZCRB1Q8TBF4 217 aaKnown RBP20.83■□□□□ 0.93
POLR2J3-218ENST00000513506 PDE3BQ13370 1112 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms