RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 RGPD3A6NKT7 1758 aaPredicted RBP23.14■■□□□ 1.29
DDR1-269ENST00000512725 RGPD4Q7Z3J3 1758 aa23.14■■□□□ 1.29
DDR1-269ENST00000512725 MARCH10Q8NA82 808 aaPredicted RBP23.13■■□□□ 1.29
DDR1-269ENST00000512725 CASZ1Q86V15 1759 aa23.13■■□□□ 1.29
DDR1-269ENST00000512725 PROM2Q8N271 834 aa23.12■■□□□ 1.29
DDR1-269ENST00000512725 AXIN2Q9Y2T1 843 aa23.11■■□□□ 1.29
DDR1-269ENST00000512725 MYOM1P52179 1685 aa23.11■■□□□ 1.29
DDR1-269ENST00000512725 WDR17Q8IZU2 1322 aa23.1■■□□□ 1.29
DDR1-269ENST00000512725 TXNRD1Q16881 649 aa23.1■■□□□ 1.29
DDR1-269ENST00000512725 ZNF784Q8NCA9 323 aaPredicted RBP23.1■■□□□ 1.29
DDR1-269ENST00000512725 BRD4O60885 1362 aaPredicted RBP23.1■■□□□ 1.29
DDR1-269ENST00000512725 AKAP12Q02952 1782 aa23.09■■□□□ 1.29
DDR1-269ENST00000512725 USP6P35125 1406 aa23.09■■□□□ 1.29
DDR1-269ENST00000512725 KIAA1210Q9ULL0 1709 aa23.09■■□□□ 1.29
DDR1-269ENST00000512725 CDCA7Q9BWT1 371 aaPredicted RBP23.09■■□□□ 1.29
DDR1-269ENST00000512725 FHDC1Q9C0D6 1143 aaPredicted RBP23.09■■□□□ 1.29
DDR1-269ENST00000512725 PTGER2P43116 358 aa23.08■■□□□ 1.29
DDR1-269ENST00000512725 EXOC5O00471 708 aa23.07■■□□□ 1.28
DDR1-269ENST00000512725 SLC15A2Q16348 729 aa23.07■■□□□ 1.28
DDR1-269ENST00000512725 SLIT3O75094 1523 aa23.07■■□□□ 1.28
DDR1-269ENST00000512725 WNK3Q9BYP7 1800 aa23.06■■□□□ 1.28
DDR1-269ENST00000512725 SYT17Q9BSW7 474 aa23.06■■□□□ 1.28
DDR1-269ENST00000512725 QRICH2Q9H0J4 1663 aa23.05■■□□□ 1.28
DDR1-269ENST00000512725 COL18A1P39060 1754 aa23.04■■□□□ 1.28
DDR1-269ENST00000512725 RGPD5Q99666 1765 aa23.04■■□□□ 1.28
DDR1-269ENST00000512725 PIK3C2AO00443 1686 aa23.03■■□□□ 1.28
DDR1-269ENST00000512725 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
DDR1-269ENST00000512725 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
DDR1-269ENST00000512725 ACSBG1Q96GR2 724 aa23.03■■□□□ 1.28
DDR1-269ENST00000512725 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
DDR1-269ENST00000512725 MTFR1LQ9H019 292 aa23.03■■□□□ 1.28
DDR1-269ENST00000512725 UTRNP46939 3433 aa23.02■■□□□ 1.28
DDR1-269ENST00000512725 ARHGEF25Q86VW2 580 aa23.02■■□□□ 1.28
DDR1-269ENST00000512725 KCNH5Q8NCM2 988 aa23.02■■□□□ 1.28
DDR1-269ENST00000512725 TTC21BQ7Z4L5 1316 aa23■■□□□ 1.27
DDR1-269ENST00000512725 EVC2Q86UK5 1308 aa23■■□□□ 1.27
DDR1-269ENST00000512725 BCL9O00512 1426 aa22.99■■□□□ 1.27
DDR1-269ENST00000512725 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
DDR1-269ENST00000512725 ARXQ96QS3 562 aa22.98■■□□□ 1.27
DDR1-269ENST00000512725 ZNF692Q9BU19 519 aaPredicted RBP22.97■■□□□ 1.27
DDR1-269ENST00000512725 CHD4Q14839 1912 aa22.96■■□□□ 1.27
DDR1-269ENST00000512725 CCDC7Q96M83 1385 aa22.96■■□□□ 1.27
DDR1-269ENST00000512725 GPR162Q16538 588 aa22.95■■□□□ 1.26
DDR1-269ENST00000512725 KAT6BQ8WYB5 2073 aa22.95■■□□□ 1.26
DDR1-269ENST00000512725 NLRP2Q9NX02 1062 aa22.95■■□□□ 1.26
DDR1-269ENST00000512725 TNS2Q63HR2 1409 aa22.94■■□□□ 1.26
DDR1-269ENST00000512725 C1QTNF8P60827 252 aa22.94■■□□□ 1.26
DDR1-269ENST00000512725 PELP1Q8IZL8 1130 aaKnown RBP22.94■■□□□ 1.26
DDR1-269ENST00000512725 TTC21AQ8NDW8 1320 aa22.92■■□□□ 1.26
DDR1-269ENST00000512725 SGIP1Q9BQI5 828 aa22.92■■□□□ 1.26
DDR1-269ENST00000512725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.91■■□□□ 1.26
DDR1-269ENST00000512725 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
DDR1-269ENST00000512725 KTN1Q86UP2 1357 aaKnown RBP22.9■■□□□ 1.26
DDR1-269ENST00000512725 TRPM1Q7Z4N2 1603 aa22.9■■□□□ 1.26
DDR1-269ENST00000512725 IL2RBP14784 551 aa22.88■■□□□ 1.25
DDR1-269ENST00000512725 ZNF827Q17R98 1081 aa22.88■■□□□ 1.25
DDR1-269ENST00000512725 NFAT5O94916 1531 aa22.87■■□□□ 1.25
DDR1-269ENST00000512725 BTAF1O14981 1849 aa22.85■■□□□ 1.25
DDR1-269ENST00000512725 POLD1P28340 1107 aa22.85■■□□□ 1.25
DDR1-269ENST00000512725 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
DDR1-269ENST00000512725 GIGYF1O75420 1035 aaPredicted RBP22.84■■□□□ 1.25
DDR1-269ENST00000512725 LRRC4BQ9NT99 713 aa22.84■■□□□ 1.25
DDR1-269ENST00000512725 ERBB3P21860 1342 aa22.83■■□□□ 1.25
DDR1-269ENST00000512725 ABCC6O95255 1503 aa22.83■■□□□ 1.25
DDR1-269ENST00000512725 ANKRD24Q8TF21 1146 aa22.83■■□□□ 1.25
DDR1-269ENST00000512725 ROCK2O75116 1388 aaKnown RBP22.83■■□□□ 1.25
DDR1-269ENST00000512725 NME9Q86XW9 330 aa22.82■■□□□ 1.24
DDR1-269ENST00000512725 DDX54Q8TDD1 881 aaKnown RBP22.82■■□□□ 1.24
DDR1-269ENST00000512725 PAPPAQ13219 1627 aa22.82■■□□□ 1.24
DDR1-269ENST00000512725 MAP3K5Q99683 1374 aa22.81■■□□□ 1.24
DDR1-269ENST00000512725 SYTL4Q96C24 671 aaPredicted RBP22.81■■□□□ 1.24
DDR1-269ENST00000512725 TMC1Q8TDI8 760 aa22.8■■□□□ 1.24
DDR1-269ENST00000512725 TFCP2L1Q9NZI6 479 aa22.8■■□□□ 1.24
DDR1-269ENST00000512725 LTN1O94822 1766 aa22.79■■□□□ 1.24
DDR1-269ENST00000512725 KCNQ4P56696 695 aa22.79■■□□□ 1.24
DDR1-269ENST00000512725 LTV1Q96GA3 475 aaPredicted RBP22.79■■□□□ 1.24
DDR1-269ENST00000512725 SLC16A10Q8TF71 515 aa22.78■■□□□ 1.24
DDR1-269ENST00000512725 MSH5O43196 834 aa22.77■■□□□ 1.24
DDR1-269ENST00000512725 NEUROD1Q13562 356 aa22.77■■□□□ 1.24
DDR1-269ENST00000512725 AKT1S1Q96B36 256 aa22.77■■□□□ 1.24
DDR1-269ENST00000512725 SLC27A3Q5K4L6 730 aa22.76■■□□□ 1.23
DDR1-269ENST00000512725 MON2Q7Z3U7 1717 aa22.76■■□□□ 1.23
DDR1-269ENST00000512725 HDGFL2Q7Z4V5 671 aaPredicted RBP22.75■■□□□ 1.23
DDR1-269ENST00000512725 NLGN2Q8NFZ4 835 aa22.75■■□□□ 1.23
DDR1-269ENST00000512725 SIN3AQ96ST3 1273 aa22.75■■□□□ 1.23
DDR1-269ENST00000512725 PNPLA7Q6ZV29 1317 aa22.75■■□□□ 1.23
DDR1-269ENST00000512725 GOLGB1Q14789 3259 aaKnown RBP22.75■■□□□ 1.23
DDR1-269ENST00000512725 USP31Q70CQ4 1352 aa22.74■■□□□ 1.23
DDR1-269ENST00000512725 PRIM1P49642 420 aaKnown RBP22.71■■□□□ 1.23
DDR1-269ENST00000512725 SBNO2Q9Y2G9 1366 aa22.69■■□□□ 1.22
DDR1-269ENST00000512725 IFFO2Q5TF58 517 aa22.69■■□□□ 1.22
DDR1-269ENST00000512725 SLC12A5Q9H2X9 1139 aa22.69■■□□□ 1.22
DDR1-269ENST00000512725 QSER1Q2KHR3 1735 aa22.68■■□□□ 1.22
DDR1-269ENST00000512725 TUBGCP6Q96RT7 1819 aa22.68■■□□□ 1.22
DDR1-269ENST00000512725 GRIN3BO60391 1043 aa22.67■■□□□ 1.22
DDR1-269ENST00000512725 IP6K1Q92551 441 aa22.67■■□□□ 1.22
DDR1-269ENST00000512725 CCNL1Q9UK58 526 aaPredicted RBP22.67■■□□□ 1.22
DDR1-269ENST00000512725 USP54Q70EL1 1684 aa22.66■■□□□ 1.22
DDR1-269ENST00000512725 YBX3P16989 372 aaKnown RBP eCLIP22.66■■□□□ 1.22
DDR1-269ENST00000512725 MSL1Q68DK7 614 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms