RNA–Protein interactions for RNA: ENST00000512670.1

PDE6A-203, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best)

Gene PDE6A, Length 2,189 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-203ENST00000512670 ARHGEF25Q86VW2 580 aa14.57□□□□□ -0.08
PDE6A-203ENST00000512670 AMPHP49418 695 aa14.57□□□□□ -0.08
PDE6A-203ENST00000512670 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
PDE6A-203ENST00000512670 PRDM11Q9NQV5 511 aa14.57□□□□□ -0.08
PDE6A-203ENST00000512670 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
PDE6A-203ENST00000512670 C8orf37Q96NL8 207 aa14.56□□□□□ -0.08
PDE6A-203ENST00000512670 SENP3-EIF4A1A0A087X0R7 540 aa14.55□□□□□ -0.08
PDE6A-203ENST00000512670 HOXC9P31274 260 aa14.55□□□□□ -0.08
PDE6A-203ENST00000512670 COL18A1P39060 1754 aa14.54□□□□□ -0.08
PDE6A-203ENST00000512670 CAMTA1Q9Y6Y1 1673 aa14.53□□□□□ -0.08
PDE6A-203ENST00000512670 SMG6Q86US8 1419 aaKnown RBP14.53□□□□□ -0.08
PDE6A-203ENST00000512670 MRS2Q9HD23 443 aa14.53□□□□□ -0.08
PDE6A-203ENST00000512670 STRN4Q9NRL3 753 aa14.53□□□□□ -0.08
PDE6A-203ENST00000512670 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.08
PDE6A-203ENST00000512670 BTG4Q9NY30 223 aa14.52□□□□□ -0.08
PDE6A-203ENST00000512670 RGPD2P0DJD1 1756 aa14.52□□□□□ -0.09
PDE6A-203ENST00000512670 PLCH1Q4KWH8 1693 aa14.52□□□□□ -0.09
PDE6A-203ENST00000512670 LMO7Q8WWI1 1683 aa14.52□□□□□ -0.09
PDE6A-203ENST00000512670 MEX3CQ5U5Q3 659 aaKnown RBP14.51□□□□□ -0.09
PDE6A-203ENST00000512670 USHBP1Q8N6Y0 703 aa14.51□□□□□ -0.09
PDE6A-203ENST00000512670 SPATA31A6Q5VVP1 1343 aa14.51□□□□□ -0.09
PDE6A-203ENST00000512670 CPDO75976 1380 aa14.51□□□□□ -0.09
PDE6A-203ENST00000512670 FLT4P35916 1363 aa14.51□□□□□ -0.09
PDE6A-203ENST00000512670 EIF4A2Q14240 407 aaKnown RBP14.51□□□□□ -0.09
PDE6A-203ENST00000512670 IP6K1Q92551 441 aa14.51□□□□□ -0.09
PDE6A-203ENST00000512670 CDK12Q9NYV4 1490 aaPredicted RBP14.51□□□□□ -0.09
PDE6A-203ENST00000512670 ANKRD24Q8TF21 1146 aa14.5□□□□□ -0.09
PDE6A-203ENST00000512670 NGLY1Q96IV0 654 aa14.49□□□□□ -0.09
PDE6A-203ENST00000512670 U2SURPO15042 1029 aaKnown RBP14.49□□□□□ -0.09
PDE6A-203ENST00000512670 USP35Q9P2H5 1018 aa14.49□□□□□ -0.09
PDE6A-203ENST00000512670 COL14A1Q05707 1796 aaKnown RBP14.49□□□□□ -0.09
PDE6A-203ENST00000512670 LARP1Q6PKG0 1096 aaKnown RBP14.48□□□□□ -0.09
PDE6A-203ENST00000512670 COL5A2P05997 1499 aaPredicted RBP14.48□□□□□ -0.09
PDE6A-203ENST00000512670 IL13P35225 146 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 AEBP1Q8IUX7 1158 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 RTL1A6NKG5 1358 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 INSRP06213 1382 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 ERBB3P21860 1342 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 HMOX1P09601 288 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 CSB-PGBD3P0DP91 1061 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 FAM9BQ8IZU0 186 aa14.47□□□□□ -0.09
PDE6A-203ENST00000512670 DIAPH1O60610 1272 aaKnown RBP14.46□□□□□ -0.09
PDE6A-203ENST00000512670 NBPF6Q5VWK0 638 aa14.46□□□□□ -0.09
PDE6A-203ENST00000512670 NBPF4Q96M43 638 aa14.46□□□□□ -0.09
PDE6A-203ENST00000512670 NRAPQ86VF7 1730 aa14.46□□□□□ -0.09
PDE6A-203ENST00000512670 AFF2P51816 1311 aa14.46□□□□□ -0.1
PDE6A-203ENST00000512670 CFAP53Q96M91 514 aa14.46□□□□□ -0.1
PDE6A-203ENST00000512670 EYA1Q99502 592 aa14.45□□□□□ -0.1
PDE6A-203ENST00000512670 SLIT2O94813 1529 aa14.45□□□□□ -0.1
PDE6A-203ENST00000512670 BCL9LQ86UU0 1499 aa14.45□□□□□ -0.1
PDE6A-203ENST00000512670 BLMP54132 1417 aaPredicted RBP14.44□□□□□ -0.1
PDE6A-203ENST00000512670 EVA1CP58658 441 aa14.44□□□□□ -0.1
PDE6A-203ENST00000512670 NLRP2Q9NX02 1062 aa14.44□□□□□ -0.1
PDE6A-203ENST00000512670 CCDC146Q8IYE0 955 aa14.44□□□□□ -0.1
PDE6A-203ENST00000512670 U2AF1L5P0DN76 240 aaPredicted RBP14.43□□□□□ -0.1
PDE6A-203ENST00000512670 U2AF1Q01081 240 aaKnown RBP eCLIP14.43□□□□□ -0.1
PDE6A-203ENST00000512670 TOM1L2Q6ZVM7 507 aa14.43□□□□□ -0.1
PDE6A-203ENST00000512670 PNISRQ8TF01 805 aaKnown RBP14.43□□□□□ -0.1
PDE6A-203ENST00000512670 USP21Q9UK80 565 aa14.43□□□□□ -0.1
PDE6A-203ENST00000512670 ADAMTS8Q9UP79 889 aa14.43□□□□□ -0.1
PDE6A-203ENST00000512670 CCER2I3L3R5 266 aa14.43□□□□□ -0.1
PDE6A-203ENST00000512670 CCDC9Q9Y3X0 531 aaKnown RBP14.43□□□□□ -0.1
PDE6A-203ENST00000512670 RGPD1P0DJD0 1748 aa14.42□□□□□ -0.1
PDE6A-203ENST00000512670 KIF24Q5T7B8 1368 aa14.42□□□□□ -0.1
PDE6A-203ENST00000512670 SULT6B1Q6IMI4 303 aa14.42□□□□□ -0.1
PDE6A-203ENST00000512670 WDR17Q8IZU2 1322 aa14.42□□□□□ -0.1
PDE6A-203ENST00000512670 FNBP4Q8N3X1 1017 aaPredicted RBP14.41□□□□□ -0.1
PDE6A-203ENST00000512670 FAM208AQ9UK61 1670 aaKnown RBP14.4□□□□□ -0.1
PDE6A-203ENST00000512670 WDR43Q15061 677 aaKnown RBP eCLIP14.4□□□□□ -0.1
PDE6A-203ENST00000512670 UNC5CLQ8IV45 518 aa14.4□□□□□ -0.1
PDE6A-203ENST00000512670 NWD2Q9ULI1 1742 aa14.4□□□□□ -0.1
PDE6A-203ENST00000512670 ABCC6O95255 1503 aa14.4□□□□□ -0.1
PDE6A-203ENST00000512670 IGSF1Q8N6C5 1336 aa14.4□□□□□ -0.1
PDE6A-203ENST00000512670 RGS17Q9UGC6 210 aaPredicted RBP14.39□□□□□ -0.11
PDE6A-203ENST00000512670 CRB1P82279 1406 aa14.38□□□□□ -0.11
PDE6A-203ENST00000512670 MEGF6O75095 1541 aa14.38□□□□□ -0.11
PDE6A-203ENST00000512670 PRKAR2BP31323 418 aa14.37□□□□□ -0.11
PDE6A-203ENST00000512670 RSPH6AQ9H0K4 717 aa14.37□□□□□ -0.11
PDE6A-203ENST00000512670 NUDCQ9Y266 331 aa14.37□□□□□ -0.11
PDE6A-203ENST00000512670 PHACTR3Q96KR7 559 aa14.37□□□□□ -0.11
PDE6A-203ENST00000512670 YTHDC1Q96MU7 727 aaKnown RBP14.36□□□□□ -0.11
PDE6A-203ENST00000512670 SALL2Q9Y467 1007 aaPredicted RBP14.36□□□□□ -0.11
PDE6A-203ENST00000512670 FAM98CQ17RN3 349 aaKnown RBP14.36□□□□□ -0.11
PDE6A-203ENST00000512670 RRP7AQ9Y3A4 280 aaKnown RBP14.36□□□□□ -0.11
PDE6A-203ENST00000512670 SPATA31A1Q5TZJ5 1347 aa14.36□□□□□ -0.11
PDE6A-203ENST00000512670 GLI3P10071 1580 aa14.36□□□□□ -0.11
PDE6A-203ENST00000512670 SPATA31A5Q5VU36 1347 aa14.35□□□□□ -0.11
PDE6A-203ENST00000512670 SPATA31A7Q8IWB4 1347 aa14.35□□□□□ -0.11
PDE6A-203ENST00000512670 QTRT2Q9H974 415 aaKnown RBP14.35□□□□□ -0.11
PDE6A-203ENST00000512670 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.35□□□□□ -0.11
PDE6A-203ENST00000512670 CARD10Q9BWT7 1032 aa14.34□□□□□ -0.11
PDE6A-203ENST00000512670 VPS72Q15906 364 aa14.34□□□□□ -0.11
PDE6A-203ENST00000512670 POTEAQ6S8J7 498 aa14.34□□□□□ -0.11
PDE6A-203ENST00000512670 PLEKHF1Q96S99 279 aa14.34□□□□□ -0.11
PDE6A-203ENST00000512670 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
PDE6A-203ENST00000512670 ATRNO75882 1429 aa14.33□□□□□ -0.11
PDE6A-203ENST00000512670 KDRP35968 1356 aa14.33□□□□□ -0.11
PDE6A-203ENST00000512670 NEUROD2Q15784 382 aa14.33□□□□□ -0.11
PDE6A-203ENST00000512670 NCAPD2Q15021 1401 aa14.33□□□□□ -0.12
PDE6A-203ENST00000512670 A0A0G2JS52 829 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms