RNA–Protein interactions for RNA: ENST00000512669.1

LETM1-207, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 966 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-207ENST00000512669 WNK3Q9BYP7 1800 aa20.77■□□□□ 0.92
LETM1-207ENST00000512669 TOM1L2Q6ZVM7 507 aa20.77■□□□□ 0.92
LETM1-207ENST00000512669 PPP1R1BQ9UD71 204 aaPredicted RBP20.77■□□□□ 0.92
LETM1-207ENST00000512669 BCL9O00512 1426 aa20.77■□□□□ 0.91
LETM1-207ENST00000512669 ROCK2O75116 1388 aaKnown RBP20.76■□□□□ 0.91
LETM1-207ENST00000512669 ZBTB7CA1YPR0 619 aa20.76■□□□□ 0.91
LETM1-207ENST00000512669 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
LETM1-207ENST00000512669 KCNQ2O43526 872 aa20.76■□□□□ 0.91
LETM1-207ENST00000512669 KCNH5Q8NCM2 988 aa20.76■□□□□ 0.91
LETM1-207ENST00000512669 ZNF692Q9BU19 519 aaPredicted RBP20.76■□□□□ 0.91
LETM1-207ENST00000512669 WDR17Q8IZU2 1322 aa20.76■□□□□ 0.91
LETM1-207ENST00000512669 COL18A1P39060 1754 aa20.75■□□□□ 0.91
LETM1-207ENST00000512669 BCL11BQ9C0K0 894 aaPredicted RBP20.75■□□□□ 0.91
LETM1-207ENST00000512669 CPSF1Q10570 1443 aaKnown RBP20.75■□□□□ 0.91
LETM1-207ENST00000512669 AKAP12Q02952 1782 aa20.73■□□□□ 0.91
LETM1-207ENST00000512669 ABCC6O95255 1503 aa20.73■□□□□ 0.91
LETM1-207ENST00000512669 TTC21AQ8NDW8 1320 aa20.72■□□□□ 0.91
LETM1-207ENST00000512669 YY1P25490 414 aa20.71■□□□□ 0.91
LETM1-207ENST00000512669 ARHGEF25Q86VW2 580 aa20.7■□□□□ 0.9
LETM1-207ENST00000512669 TTC21BQ7Z4L5 1316 aa20.7■□□□□ 0.9
LETM1-207ENST00000512669 TONSLQ96HA7 1378 aa20.7■□□□□ 0.9
LETM1-207ENST00000512669 CARD10Q9BWT7 1032 aa20.69■□□□□ 0.9
LETM1-207ENST00000512669 CASZ1Q86V15 1759 aa20.68■□□□□ 0.9
LETM1-207ENST00000512669 AXIN2Q9Y2T1 843 aa20.68■□□□□ 0.9
LETM1-207ENST00000512669 CCDC7Q96M83 1385 aa20.68■□□□□ 0.9
LETM1-207ENST00000512669 CSB-PGBD3P0DP91 1061 aa20.67■□□□□ 0.9
LETM1-207ENST00000512669 MARCH10Q8NA82 808 aaPredicted RBP20.66■□□□□ 0.9
LETM1-207ENST00000512669 CARD11Q9BXL7 1154 aa20.66■□□□□ 0.9
LETM1-207ENST00000512669 RGPD5Q99666 1765 aa20.65■□□□□ 0.9
LETM1-207ENST00000512669 NFAT5O94916 1531 aa20.65■□□□□ 0.9
LETM1-207ENST00000512669 ANO8Q9HCE9 1232 aaPredicted RBP20.65■□□□□ 0.9
LETM1-207ENST00000512669 EXOC5O00471 708 aa20.64■□□□□ 0.89
LETM1-207ENST00000512669 TNS2Q63HR2 1409 aa20.63■□□□□ 0.89
LETM1-207ENST00000512669 KTN1Q86UP2 1357 aaKnown RBP20.63■□□□□ 0.89
LETM1-207ENST00000512669 MON2Q7Z3U7 1717 aa20.62■□□□□ 0.89
LETM1-207ENST00000512669 STK32BQ9NY57 414 aa20.62■□□□□ 0.89
LETM1-207ENST00000512669 SBNO2Q9Y2G9 1366 aa20.61■□□□□ 0.89
LETM1-207ENST00000512669 USP54Q70EL1 1684 aa20.61■□□□□ 0.89
LETM1-207ENST00000512669 SOX12O15370 315 aa20.6■□□□□ 0.89
LETM1-207ENST00000512669 TXNRD1Q16881 649 aa20.6■□□□□ 0.89
LETM1-207ENST00000512669 PROM2Q8N271 834 aa20.6■□□□□ 0.89
LETM1-207ENST00000512669 USP31Q70CQ4 1352 aa20.59■□□□□ 0.89
LETM1-207ENST00000512669 NHSQ6T4R5 1651 aa20.59■□□□□ 0.89
LETM1-207ENST00000512669 PTF1AQ7RTS3 328 aa20.59■□□□□ 0.89
LETM1-207ENST00000512669 SLC15A2Q16348 729 aa20.57■□□□□ 0.88
LETM1-207ENST00000512669 ERBB3P21860 1342 aa20.56■□□□□ 0.88
LETM1-207ENST00000512669 ZBTB7AO95365 584 aa20.56■□□□□ 0.88
LETM1-207ENST00000512669 MYOM1P52179 1685 aa20.56■□□□□ 0.88
LETM1-207ENST00000512669 PCGF6Q9BYE7 350 aa20.55■□□□□ 0.88
LETM1-207ENST00000512669 MTFR1LQ9H019 292 aa20.55■□□□□ 0.88
LETM1-207ENST00000512669 PTGER2P43116 358 aa20.54■□□□□ 0.88
LETM1-207ENST00000512669 TESK2Q96S53 571 aa20.54■□□□□ 0.88
LETM1-207ENST00000512669 LTN1O94822 1766 aa20.54■□□□□ 0.88
LETM1-207ENST00000512669 ST20-MTHFSA0A0A6YYL1 179 aa20.52■□□□□ 0.88
LETM1-207ENST00000512669 IL2RBP14784 551 aa20.52■□□□□ 0.88
LETM1-207ENST00000512669 HDGFL2Q7Z4V5 671 aaPredicted RBP20.52■□□□□ 0.88
LETM1-207ENST00000512669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.52■□□□□ 0.88
LETM1-207ENST00000512669 PDGFDQ9GZP0 370 aaPredicted RBP20.52■□□□□ 0.88
LETM1-207ENST00000512669 NLRP2Q9NX02 1062 aa20.52■□□□□ 0.88
LETM1-207ENST00000512669 EDC4Q6P2E9 1401 aaKnown RBP20.51■□□□□ 0.87
LETM1-207ENST00000512669 CD163L1Q9NR16 1453 aa20.5■□□□□ 0.87
LETM1-207ENST00000512669 PAPPAQ13219 1627 aa20.5■□□□□ 0.87
LETM1-207ENST00000512669 SLC12A5Q9H2X9 1139 aa20.5■□□□□ 0.87
LETM1-207ENST00000512669 ATF5Q9Y2D1 282 aaPredicted RBP20.5■□□□□ 0.87
LETM1-207ENST00000512669 BTAF1O14981 1849 aa20.48■□□□□ 0.87
LETM1-207ENST00000512669 FAM208AQ9UK61 1670 aaKnown RBP20.48■□□□□ 0.87
LETM1-207ENST00000512669 NME9Q86XW9 330 aa20.48■□□□□ 0.87
LETM1-207ENST00000512669 ANKRD24Q8TF21 1146 aa20.48■□□□□ 0.87
LETM1-207ENST00000512669 PUS7Q96PZ0 661 aaKnown RBP20.48■□□□□ 0.87
LETM1-207ENST00000512669 SYT17Q9BSW7 474 aa20.48■□□□□ 0.87
LETM1-207ENST00000512669 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
LETM1-207ENST00000512669 MAP3K5Q99683 1374 aa20.47■□□□□ 0.87
LETM1-207ENST00000512669 TMC1Q8TDI8 760 aa20.47■□□□□ 0.87
LETM1-207ENST00000512669 ACSBG1Q96GR2 724 aa20.47■□□□□ 0.87
LETM1-207ENST00000512669 FHDC1Q9C0D6 1143 aaPredicted RBP20.47■□□□□ 0.87
LETM1-207ENST00000512669 SGIP1Q9BQI5 828 aa20.46■□□□□ 0.87
LETM1-207ENST00000512669 KAT6BQ8WYB5 2073 aa20.46■□□□□ 0.87
LETM1-207ENST00000512669 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
LETM1-207ENST00000512669 CHD4Q14839 1912 aa20.45■□□□□ 0.86
LETM1-207ENST00000512669 UTRNP46939 3433 aa20.44■□□□□ 0.86
LETM1-207ENST00000512669 SLC27A3Q5K4L6 730 aa20.44■□□□□ 0.86
LETM1-207ENST00000512669 ARXQ96QS3 562 aa20.44■□□□□ 0.86
LETM1-207ENST00000512669 TIMELESSQ9UNS1 1208 aa20.43■□□□□ 0.86
LETM1-207ENST00000512669 QSER1Q2KHR3 1735 aa20.43■□□□□ 0.86
LETM1-207ENST00000512669 A0A1W2PP64 1363 aa20.43■□□□□ 0.86
LETM1-207ENST00000512669 SLC16A10Q8TF71 515 aa20.42■□□□□ 0.86
LETM1-207ENST00000512669 SLC24A1O60721 1099 aa20.41■□□□□ 0.86
LETM1-207ENST00000512669 ZNF784Q8NCA9 323 aaPredicted RBP20.41■□□□□ 0.86
LETM1-207ENST00000512669 IP6K1Q92551 441 aa20.41■□□□□ 0.86
LETM1-207ENST00000512669 USP47Q96K76 1375 aa20.41■□□□□ 0.86
LETM1-207ENST00000512669 ZNF827Q17R98 1081 aa20.38■□□□□ 0.85
LETM1-207ENST00000512669 AKT1S1Q96B36 256 aa20.37■□□□□ 0.85
LETM1-207ENST00000512669 LRRC4BQ9NT99 713 aa20.37■□□□□ 0.85
LETM1-207ENST00000512669 POLD1P28340 1107 aa20.36■□□□□ 0.85
LETM1-207ENST00000512669 DDX54Q8TDD1 881 aaKnown RBP20.36■□□□□ 0.85
LETM1-207ENST00000512669 COG3Q96JB2 828 aa20.36■□□□□ 0.85
LETM1-207ENST00000512669 ANKRD36BQ8N2N9 1353 aa20.35■□□□□ 0.85
LETM1-207ENST00000512669 COL24A1Q17RW2 1714 aa20.35■□□□□ 0.85
LETM1-207ENST00000512669 RTL1A6NKG5 1358 aa20.34■□□□□ 0.85
LETM1-207ENST00000512669 HMGB2P26583 209 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms