RNA–Protein interactions for RNA: ENST00000512517.1

LINC01258-201, Transcript of long intergenic non-protein coding RNA 1258, humanhuman

TSL 2 BASIC

Gene LINC01258, Length 2,059 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01258-201ENST00000512517 ZNF622Q969S3 477 aaKnown RBP eCLIP11.08□□□□□ -0.64
LINC01258-201ENST00000512517 YY1AP1Q9H869 796 aa11.08□□□□□ -0.64
LINC01258-201ENST00000512517 TECPR2O15040 1411 aa11.08□□□□□ -0.64
LINC01258-201ENST00000512517 PTPRUQ92729 1446 aa11.08□□□□□ -0.64
LINC01258-201ENST00000512517 TULP1O00294 542 aaPredicted RBP11.07□□□□□ -0.64
LINC01258-201ENST00000512517 RCAN3Q9UKA8 241 aa11.07□□□□□ -0.64
LINC01258-201ENST00000512517 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
LINC01258-201ENST00000512517 FAM135BQ49AJ0 1406 aa11.07□□□□□ -0.64
LINC01258-201ENST00000512517 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
LINC01258-201ENST00000512517 TSPYL1Q9H0U9 437 aa11.07□□□□□ -0.64
LINC01258-201ENST00000512517 ATAD2Q6PL18 1390 aa11.06□□□□□ -0.64
LINC01258-201ENST00000512517 KDM2BQ8NHM5 1336 aa11.06□□□□□ -0.64
LINC01258-201ENST00000512517 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
LINC01258-201ENST00000512517 CARD14Q9BXL6 1004 aa11.06□□□□□ -0.64
LINC01258-201ENST00000512517 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
LINC01258-201ENST00000512517 MCM5P33992 734 aa11.05□□□□□ -0.64
LINC01258-201ENST00000512517 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 CGNQ9P2M7 1197 aaKnown RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 PARD3Q8TEW0 1356 aa11.05□□□□□ -0.64
LINC01258-201ENST00000512517 NPHP4O75161 1426 aaPredicted RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
LINC01258-201ENST00000512517 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 IRX5P78411 483 aaPredicted RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 GZF1Q9H116 711 aaPredicted RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 CHD2O14647 1828 aaKnown RBP11.05□□□□□ -0.64
LINC01258-201ENST00000512517 KCNA6P17658 529 aa11.04□□□□□ -0.64
LINC01258-201ENST00000512517 HSPA2P54652 639 aa11.04□□□□□ -0.64
LINC01258-201ENST00000512517 PDE3BQ13370 1112 aa11.04□□□□□ -0.64
LINC01258-201ENST00000512517 CNPY4Q8N129 248 aa11.04□□□□□ -0.64
LINC01258-201ENST00000512517 SIRT1Q96EB6 747 aa11.04□□□□□ -0.64
LINC01258-201ENST00000512517 CABP1Q9NZU7 370 aa11.04□□□□□ -0.64
LINC01258-201ENST00000512517 HDAC5Q9UQL6 1122 aa11.04□□□□□ -0.64
LINC01258-201ENST00000512517 XRN1Q8IZH2 1706 aaKnown RBP11.04□□□□□ -0.64
LINC01258-201ENST00000512517 PTMAP06454 111 aaKnown RBP11.04□□□□□ -0.64
LINC01258-201ENST00000512517 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
LINC01258-201ENST00000512517 ANKRD36BQ8N2N9 1353 aa11.03□□□□□ -0.64
LINC01258-201ENST00000512517 CCDC66A2RUB6 948 aa11.03□□□□□ -0.64
LINC01258-201ENST00000512517 NLRP13Q86W25 1043 aa11.03□□□□□ -0.64
LINC01258-201ENST00000512517 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
LINC01258-201ENST00000512517 GEMIN8Q9NWZ8 242 aaKnown RBP11.03□□□□□ -0.64
LINC01258-201ENST00000512517 TERF2IPQ9NYB0 399 aa11.03□□□□□ -0.64
LINC01258-201ENST00000512517 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
LINC01258-201ENST00000512517 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.64
LINC01258-201ENST00000512517 RBM33Q96EV2 1170 aaKnown RBP11.02□□□□□ -0.64
LINC01258-201ENST00000512517 NOL7Q9UMY1 257 aaKnown RBP11.02□□□□□ -0.64
LINC01258-201ENST00000512517 PTCH1Q13635 1447 aa11.02□□□□□ -0.64
LINC01258-201ENST00000512517 SKOR2Q2VWA4 1001 aaPredicted RBP11.02□□□□□ -0.65
LINC01258-201ENST00000512517 CGNL1Q0VF96 1302 aa11.02□□□□□ -0.65
LINC01258-201ENST00000512517 PIK3R4Q99570 1358 aa11.01□□□□□ -0.65
LINC01258-201ENST00000512517 PPIP5K1Q6PFW1 1433 aa11.01□□□□□ -0.65
LINC01258-201ENST00000512517 PSEN1P49768 467 aa11.01□□□□□ -0.65
LINC01258-201ENST00000512517 NUDT16Q96DE0 195 aaKnown RBP11.01□□□□□ -0.65
LINC01258-201ENST00000512517 CHMP5Q9NZZ3 219 aa11.01□□□□□ -0.65
LINC01258-201ENST00000512517 BRD4O60885 1362 aaPredicted RBP11.01□□□□□ -0.65
LINC01258-201ENST00000512517 ARID3AQ99856 593 aa11□□□□□ -0.65
LINC01258-201ENST00000512517 RGPD8O14715 1765 aaPredicted RBP11□□□□□ -0.65
LINC01258-201ENST00000512517 C14orf37Q86TY3 774 aa11□□□□□ -0.65
LINC01258-201ENST00000512517 WWC1Q8IX03 1113 aa11□□□□□ -0.65
LINC01258-201ENST00000512517 ADGRB2O60241 1585 aa11□□□□□ -0.65
LINC01258-201ENST00000512517 ITSN1Q15811 1721 aa11□□□□□ -0.65
LINC01258-201ENST00000512517 APPP05067 770 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 CBX1P83916 185 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 MORC1Q86VD1 984 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 FBXO3Q9UK99 471 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 USP19O94966 1318 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 IBTKQ9P2D0 1353 aaPredicted RBP10.99□□□□□ -0.65
LINC01258-201ENST00000512517 NPC1L1Q9UHC9 1359 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 PPP2R1AP30153 589 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 GABPB1Q06547 395 aaPredicted RBP10.99□□□□□ -0.65
LINC01258-201ENST00000512517 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
LINC01258-201ENST00000512517 MYRIPQ8NFW9 859 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
LINC01258-201ENST00000512517 CD163L1Q9NR16 1453 aa10.98□□□□□ -0.65
LINC01258-201ENST00000512517 USP32Q8NFA0 1604 aa10.98□□□□□ -0.65
LINC01258-201ENST00000512517 NASPP49321 788 aaPredicted RBP10.98□□□□□ -0.65
LINC01258-201ENST00000512517 FAM193AP78312 1265 aa10.98□□□□□ -0.65
LINC01258-201ENST00000512517 KIF3AQ9Y496 699 aa10.98□□□□□ -0.65
LINC01258-201ENST00000512517 PRR36Q9H6K5 1346 aa10.98□□□□□ -0.65
LINC01258-201ENST00000512517 ATP7BP35670 1465 aa10.98□□□□□ -0.65
LINC01258-201ENST00000512517 SENP3-EIF4A1A0A087X0R7 540 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 KCNJ4P48050 445 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 HMGN5P82970 282 aaKnown RBP10.97□□□□□ -0.65
LINC01258-201ENST00000512517 ZNF771Q7L3S4 317 aaPredicted RBP10.97□□□□□ -0.65
LINC01258-201ENST00000512517 PRIMPOLQ96LW4 560 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 TIGD1Q96MW7 591 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 KCNG1Q9UIX4 513 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 KIF20BQ96Q89 1820 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 E9PSI1 815 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 ZBTB22O15209 634 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 GTF2F1P35269 517 aaKnown RBP eCLIP10.97□□□□□ -0.65
LINC01258-201ENST00000512517 RBM25P49756 843 aaKnown RBP10.97□□□□□ -0.65
LINC01258-201ENST00000512517 GRIPAP1Q4V328 841 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 NALCNQ8IZF0 1738 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 PNISRQ8TF01 805 aaKnown RBP10.97□□□□□ -0.65
LINC01258-201ENST00000512517 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
LINC01258-201ENST00000512517 LMTK3Q96Q04 1460 aa10.96□□□□□ -0.65
LINC01258-201ENST00000512517 CRBNQ96SW2 442 aa10.96□□□□□ -0.65
LINC01258-201ENST00000512517 AKAP12Q02952 1782 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms