RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 AKAP12Q02952 1782 aa14.99□□□□□ -0.01
PDLIM5-217ENST00000512274 COL5A2P05997 1499 aaPredicted RBP14.98□□□□□ -0.01
PDLIM5-217ENST00000512274 ABTB2Q8N961 1025 aa14.98□□□□□ -0.01
PDLIM5-217ENST00000512274 MARCH10Q8NA82 808 aaPredicted RBP14.98□□□□□ -0.01
PDLIM5-217ENST00000512274 NUDT16Q96DE0 195 aaKnown RBP14.98□□□□□ -0.01
PDLIM5-217ENST00000512274 UTRNP46939 3433 aa14.97□□□□□ -0.01
PDLIM5-217ENST00000512274 CRB1P82279 1406 aa14.97□□□□□ -0.01
PDLIM5-217ENST00000512274 ACEP12821 1306 aa14.95□□□□□ -0.02
PDLIM5-217ENST00000512274 TOM1L2Q6ZVM7 507 aa14.95□□□□□ -0.02
PDLIM5-217ENST00000512274 CPDO75976 1380 aa14.95□□□□□ -0.02
PDLIM5-217ENST00000512274 MAP3K5Q99683 1374 aa14.95□□□□□ -0.02
PDLIM5-217ENST00000512274 WNK3Q9BYP7 1800 aa14.94□□□□□ -0.02
PDLIM5-217ENST00000512274 GCP02774 474 aa14.94□□□□□ -0.02
PDLIM5-217ENST00000512274 HSPA6P17066 643 aa14.93□□□□□ -0.02
PDLIM5-217ENST00000512274 NLGN2Q8NFZ4 835 aa14.93□□□□□ -0.02
PDLIM5-217ENST00000512274 ADGRB1O14514 1584 aa14.92□□□□□ -0.02
PDLIM5-217ENST00000512274 USP19O94966 1318 aa14.92□□□□□ -0.02
PDLIM5-217ENST00000512274 TONSLQ96HA7 1378 aa14.91□□□□□ -0.02
PDLIM5-217ENST00000512274 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
PDLIM5-217ENST00000512274 ZNF526Q8TF50 670 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-217ENST00000512274 SIN3AQ96ST3 1273 aa14.91□□□□□ -0.02
PDLIM5-217ENST00000512274 TOPAZ1Q8N9V7 1692 aa14.9□□□□□ -0.02
PDLIM5-217ENST00000512274 ZNF827Q17R98 1081 aa14.9□□□□□ -0.02
PDLIM5-217ENST00000512274 ACSBG1Q96GR2 724 aa14.9□□□□□ -0.02
PDLIM5-217ENST00000512274 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
PDLIM5-217ENST00000512274 ATP10DQ9P241 1426 aa14.9□□□□□ -0.02
PDLIM5-217ENST00000512274 POLR3AO14802 1390 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-217ENST00000512274 YBX3P16989 372 aaKnown RBP eCLIP14.89□□□□□ -0.031e-7■■□□□ 14.3
PDLIM5-217ENST00000512274 GPBP1L1Q9HC44 474 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-217ENST00000512274 KDM2AQ9Y2K7 1162 aa14.89□□□□□ -0.03
PDLIM5-217ENST00000512274 RGPD5Q99666 1765 aa14.88□□□□□ -0.03
PDLIM5-217ENST00000512274 CAPN15O75808 1086 aa14.88□□□□□ -0.03
PDLIM5-217ENST00000512274 POLD1P28340 1107 aa14.88□□□□□ -0.03
PDLIM5-217ENST00000512274 CEP350Q5VT06 3117 aa14.88□□□□□ -0.03
PDLIM5-217ENST00000512274 KAT6BQ8WYB5 2073 aa14.88□□□□□ -0.03
PDLIM5-217ENST00000512274 BCL9O00512 1426 aa14.87□□□□□ -0.03
PDLIM5-217ENST00000512274 EXOC5O00471 708 aa14.87□□□□□ -0.03
PDLIM5-217ENST00000512274 PAPPAQ13219 1627 aa14.87□□□□□ -0.03
PDLIM5-217ENST00000512274 AXIN2Q9Y2T1 843 aa14.86□□□□□ -0.03
PDLIM5-217ENST00000512274 ARHGEF28Q8N1W1 1705 aaKnown RBP14.86□□□□□ -0.03
PDLIM5-217ENST00000512274 AATKQ6ZMQ8 1374 aa14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 NHSQ6T4R5 1651 aa14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 GRIN3BO60391 1043 aa14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 CSB-PGBD3P0DP91 1061 aa14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 CDCA7Q9BWT1 371 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 WDR17Q8IZU2 1322 aa14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 COL18A1P39060 1754 aa14.85□□□□□ -0.03
PDLIM5-217ENST00000512274 PLEKHG3A1L390 1219 aa14.84□□□□□ -0.03
PDLIM5-217ENST00000512274 LRRC4BQ9NT99 713 aa14.84□□□□□ -0.03
PDLIM5-217ENST00000512274 BTAF1O14981 1849 aa14.83□□□□□ -0.04
PDLIM5-217ENST00000512274 NLRP6P59044 892 aa14.83□□□□□ -0.04
PDLIM5-217ENST00000512274 NEUROD1Q13562 356 aa14.83□□□□□ -0.04
PDLIM5-217ENST00000512274 SLC16A10Q8TF71 515 aa14.82□□□□□ -0.04
PDLIM5-217ENST00000512274 COL24A1Q17RW2 1714 aa14.81□□□□□ -0.04
PDLIM5-217ENST00000512274 TUBGCP6Q96RT7 1819 aa14.81□□□□□ -0.04
PDLIM5-217ENST00000512274 ZNF316A6NFI3 1004 aaPredicted RBP14.81□□□□□ -0.04
PDLIM5-217ENST00000512274 SOX12O15370 315 aa14.8□□□□□ -0.04
PDLIM5-217ENST00000512274 KCNQ4P56696 695 aa14.8□□□□□ -0.04
PDLIM5-217ENST00000512274 AKT1S1Q96B36 256 aa14.8□□□□□ -0.04
PDLIM5-217ENST00000512274 STAC3Q96MF2 364 aa14.8□□□□□ -0.04
PDLIM5-217ENST00000512274 PNPLA7Q6ZV29 1317 aa14.8□□□□□ -0.04
PDLIM5-217ENST00000512274 QSER1Q2KHR3 1735 aa14.8□□□□□ -0.04
PDLIM5-217ENST00000512274 BRD4O60885 1362 aaPredicted RBP14.79□□□□□ -0.04
PDLIM5-217ENST00000512274 USP6P35125 1406 aa14.79□□□□□ -0.04
PDLIM5-217ENST00000512274 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
PDLIM5-217ENST00000512274 CARD10Q9BWT7 1032 aa14.79□□□□□ -0.04
PDLIM5-217ENST00000512274 TFCP2L1Q9NZI6 479 aa14.79□□□□□ -0.04
PDLIM5-217ENST00000512274 SLIT3O75094 1523 aa14.78□□□□□ -0.04
PDLIM5-217ENST00000512274 L3MBTL2Q969R5 705 aa14.78□□□□□ -0.04
PDLIM5-217ENST00000512274 TNS2Q63HR2 1409 aa14.77□□□□□ -0.04
PDLIM5-217ENST00000512274 PPIP5K1Q6PFW1 1433 aa14.77□□□□□ -0.04
PDLIM5-217ENST00000512274 MSH5O43196 834 aa14.77□□□□□ -0.05
PDLIM5-217ENST00000512274 SRPK2P78362 688 aaKnown RBP14.77□□□□□ -0.05
PDLIM5-217ENST00000512274 COL13A1Q5TAT6 717 aaPredicted RBP14.77□□□□□ -0.05
PDLIM5-217ENST00000512274 CPSF1Q10570 1443 aaKnown RBP14.75□□□□□ -0.05
PDLIM5-217ENST00000512274 APLP1P51693 650 aa14.75□□□□□ -0.05
PDLIM5-217ENST00000512274 MSL1Q68DK7 614 aa14.75□□□□□ -0.05
PDLIM5-217ENST00000512274 DNAJC5GQ8N7S2 189 aa14.75□□□□□ -0.05
PDLIM5-217ENST00000512274 CABP2Q9NPB3 220 aa14.75□□□□□ -0.05
PDLIM5-217ENST00000512274 WWC3Q9ULE0 1092 aa14.75□□□□□ -0.05
PDLIM5-217ENST00000512274 KIF3CO14782 793 aa14.74□□□□□ -0.05
PDLIM5-217ENST00000512274 ARHGEF25Q86VW2 580 aa14.74□□□□□ -0.05
PDLIM5-217ENST00000512274 PIK3C2AO00443 1686 aa14.74□□□□□ -0.05
PDLIM5-217ENST00000512274 ADCY9O60503 1353 aa14.73□□□□□ -0.05
PDLIM5-217ENST00000512274 TRPM1Q7Z4N2 1603 aa14.73□□□□□ -0.05
PDLIM5-217ENST00000512274 CCDC7Q96M83 1385 aa14.73□□□□□ -0.05
PDLIM5-217ENST00000512274 SLC27A3Q5K4L6 730 aa14.71□□□□□ -0.05
PDLIM5-217ENST00000512274 CABP1Q9NZU7 370 aa14.71□□□□□ -0.05
PDLIM5-217ENST00000512274 ABCC6O95255 1503 aa14.71□□□□□ -0.06
PDLIM5-217ENST00000512274 GOLGB1Q14789 3259 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-217ENST00000512274 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-217ENST00000512274 TNS4Q8IZW8 715 aa14.7□□□□□ -0.06
PDLIM5-217ENST00000512274 NLRP2Q9NX02 1062 aa14.7□□□□□ -0.06
PDLIM5-217ENST00000512274 SYTL4Q96C24 671 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-217ENST00000512274 IL2RBP14784 551 aa14.68□□□□□ -0.06
PDLIM5-217ENST00000512274 PRELPP51888 382 aa14.68□□□□□ -0.06
PDLIM5-217ENST00000512274 HTRA3P83110 453 aa14.68□□□□□ -0.06
PDLIM5-217ENST00000512274 KCNH5Q8NCM2 988 aa14.68□□□□□ -0.06
PDLIM5-217ENST00000512274 WDR90Q96KV7 1748 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms