RNA–Protein interactions for RNA: ENST00000512130.5

LINC01088-209, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3

Gene LINC01088, Length 525 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-209ENST00000512130 ERFEQ4G0M1 354 aa10.11□□□□□ -0.79
LINC01088-209ENST00000512130 KANK4Q5T7N3 995 aaPredicted RBP10.11□□□□□ -0.79
LINC01088-209ENST00000512130 LARP1Q6PKG0 1096 aaKnown RBP10.11□□□□□ -0.79
LINC01088-209ENST00000512130 DEPDC4Q8N2C3 294 aa10.11□□□□□ -0.79
LINC01088-209ENST00000512130 PCDH10Q9P2E7 1040 aa10.11□□□□□ -0.79
LINC01088-209ENST00000512130 CDV3Q9UKY7 258 aaKnown RBP10.11□□□□□ -0.79
LINC01088-209ENST00000512130 NCOA4Q13772 614 aa10.1□□□□□ -0.79
LINC01088-209ENST00000512130 PHTF2Q8N3S3 785 aa10.1□□□□□ -0.79
LINC01088-209ENST00000512130 ANKLE1Q8NAG6 615 aa10.1□□□□□ -0.79
LINC01088-209ENST00000512130 MKRN1Q9UHC7 482 aaKnown RBP10.1□□□□□ -0.79
LINC01088-209ENST00000512130 PPEF1O14829 653 aaPredicted RBP10.09□□□□□ -0.79
LINC01088-209ENST00000512130 ELOAQ14241 798 aaKnown RBP10.09□□□□□ -0.79
LINC01088-209ENST00000512130 CCDC125Q86Z20 511 aa10.09□□□□□ -0.79
LINC01088-209ENST00000512130 DOLKQ9UPQ8 538 aa10.09□□□□□ -0.79
LINC01088-209ENST00000512130 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
LINC01088-209ENST00000512130 BRD1O95696 1058 aa10.08□□□□□ -0.8
LINC01088-209ENST00000512130 SH3BP2P78314 561 aa10.08□□□□□ -0.8
LINC01088-209ENST00000512130 TRIM50Q86XT4 487 aa10.08□□□□□ -0.8
LINC01088-209ENST00000512130 FAM196BA6NMK8 535 aa10.07□□□□□ -0.8
LINC01088-209ENST00000512130 RASA1P20936 1047 aa10.07□□□□□ -0.8
LINC01088-209ENST00000512130 TRIM32Q13049 653 aa10.07□□□□□ -0.8
LINC01088-209ENST00000512130 B4GALNT3Q6L9W6 998 aa10.07□□□□□ -0.8
LINC01088-209ENST00000512130 NOVA2Q9UNW9 492 aaKnown RBP10.07□□□□□ -0.8
LINC01088-209ENST00000512130 NOD1Q9Y239 953 aa10.07□□□□□ -0.8
LINC01088-209ENST00000512130 GIGYF1O75420 1035 aaPredicted RBP10.06□□□□□ -0.8
LINC01088-209ENST00000512130 ATP1A2P50993 1020 aa10.06□□□□□ -0.8
LINC01088-209ENST00000512130 WNT7BP56706 349 aa10.06□□□□□ -0.8
LINC01088-209ENST00000512130 SIRT1Q96EB6 747 aa10.06□□□□□ -0.8
LINC01088-209ENST00000512130 C1QTNF2Q9BXJ5 285 aa10.06□□□□□ -0.8
LINC01088-209ENST00000512130 CHIC2Q9UKJ5 165 aa10.06□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L15C9J2P7 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L10C9JJH3 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L13C9JLJ4 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L12C9JPN9 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L11C9JVI0 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L21D6R901 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L18D6R9N7 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L22D6RA61 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L17D6RBQ6 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L19D6RCP7 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L20D6RJB6 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
LINC01088-209ENST00000512130 USP17L24Q0WX57 530 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 C4orf48Q5BLP8 95 aa10.05□□□□□ -0.8
LINC01088-209ENST00000512130 TRMT44Q8IYL2 757 aaKnown RBP10.05□□□□□ -0.8
LINC01088-209ENST00000512130 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.05□□□□□ -0.8
LINC01088-209ENST00000512130 RBM19Q9Y4C8 960 aaKnown RBP10.05□□□□□ -0.8
LINC01088-209ENST00000512130 CD2BP2O95400 341 aaKnown RBP10.04□□□□□ -0.8
LINC01088-209ENST00000512130 RPIAP49247 311 aa10.04□□□□□ -0.8
LINC01088-209ENST00000512130 KCNA1Q09470 495 aa10.04□□□□□ -0.8
LINC01088-209ENST00000512130 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
LINC01088-209ENST00000512130 SEPT12Q8IYM1 358 aa10.04□□□□□ -0.8
LINC01088-209ENST00000512130 TRIM52Q96A61 297 aa10.04□□□□□ -0.8
LINC01088-209ENST00000512130 TRAF7Q6Q0C0 670 aa10.03□□□□□ -0.8
LINC01088-209ENST00000512130 SPNS2Q8IVW8 549 aa10.03□□□□□ -0.8
LINC01088-209ENST00000512130 FAM200AQ8TCP9 573 aa10.03□□□□□ -0.8
LINC01088-209ENST00000512130 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
LINC01088-209ENST00000512130 USP4Q13107 963 aa10.02□□□□□ -0.81
LINC01088-209ENST00000512130 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
LINC01088-209ENST00000512130 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
LINC01088-209ENST00000512130 CCDC85AQ96PX6 553 aaPredicted RBP10.02□□□□□ -0.81
LINC01088-209ENST00000512130 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.81
LINC01088-209ENST00000512130 TMEM88BA6NKF7 163 aa10.01□□□□□ -0.81
LINC01088-209ENST00000512130 CRTC2Q53ET0 693 aaPredicted RBP10.01□□□□□ -0.81
LINC01088-209ENST00000512130 EHBP1Q8NDI1 1231 aa10.01□□□□□ -0.81
LINC01088-209ENST00000512130 KCTD15Q96SI1 283 aaPredicted RBP10.01□□□□□ -0.81
LINC01088-209ENST00000512130 CDCA7Q9BWT1 371 aaPredicted RBP10.01□□□□□ -0.81
LINC01088-209ENST00000512130 DNAAF2Q9NVR5 837 aaKnown RBP10.01□□□□□ -0.81
LINC01088-209ENST00000512130 PCDHB11Q9Y5F2 797 aa10.01□□□□□ -0.81
LINC01088-209ENST00000512130 ESPNB1AK53 854 aa10□□□□□ -0.81
LINC01088-209ENST00000512130 PTK7Q13308 1070 aa10□□□□□ -0.81
LINC01088-209ENST00000512130 PLA2G2CQ5R387 149 aa10□□□□□ -0.81
LINC01088-209ENST00000512130 TMEM164Q5U3C3 297 aa10□□□□□ -0.81
LINC01088-209ENST00000512130 VASH1Q7L8A9 365 aaPredicted RBP10□□□□□ -0.81
LINC01088-209ENST00000512130 ZMIZ1Q9ULJ6 1067 aa10□□□□□ -0.81
LINC01088-209ENST00000512130 CARNS1A5YM72 827 aa9.99□□□□□ -0.81
LINC01088-209ENST00000512130 MYCP01106 439 aaPredicted RBP9.99□□□□□ -0.81
LINC01088-209ENST00000512130 RAB15P59190 212 aa9.99□□□□□ -0.81
LINC01088-209ENST00000512130 TSGA10IPQ3SY00 556 aa9.99□□□□□ -0.81
LINC01088-209ENST00000512130 ANKMY2Q8IV38 441 aa9.99□□□□□ -0.81
LINC01088-209ENST00000512130 LARGE2Q8N3Y3 721 aa9.99□□□□□ -0.81
LINC01088-209ENST00000512130 STK32AQ8WU08 396 aa9.99□□□□□ -0.81
LINC01088-209ENST00000512130 ZNF594Q96JF6 807 aaPredicted RBP9.99□□□□□ -0.81
LINC01088-209ENST00000512130 MAP4K5Q9Y4K4 846 aa9.99□□□□□ -0.81
LINC01088-209ENST00000512130 GTF2IP78347 998 aa9.98□□□□□ -0.81
LINC01088-209ENST00000512130 PSME1Q06323 249 aa9.98□□□□□ -0.81
LINC01088-209ENST00000512130 SKOR1P84550 965 aa9.97□□□□□ -0.81
LINC01088-209ENST00000512130 DPYDQ12882 1025 aa9.97□□□□□ -0.81
LINC01088-209ENST00000512130 ARID5BQ14865 1188 aa9.97□□□□□ -0.81
LINC01088-209ENST00000512130 GZF1Q9H116 711 aaPredicted RBP9.97□□□□□ -0.81
LINC01088-209ENST00000512130 RC3H1Q5TC82 1133 aaKnown RBP9.96□□□□□ -0.82
LINC01088-209ENST00000512130 CLDN10P78369 228 aa9.95□□□□□ -0.82
LINC01088-209ENST00000512130 SEC13P55735 322 aa9.94□□□□□ -0.82
LINC01088-209ENST00000512130 DHX9Q08211 1270 aaKnown RBP9.94□□□□□ -0.82
LINC01088-209ENST00000512130 SWI5Q1ZZU3 235 aa9.94□□□□□ -0.82
LINC01088-209ENST00000512130 TMCO4Q5TGY1 634 aa9.94□□□□□ -0.82
LINC01088-209ENST00000512130 INTS6LQ5JSJ4 861 aaKnown RBP9.93□□□□□ -0.82
LINC01088-209ENST00000512130 CCDC102BQ68D86 513 aa9.93□□□□□ -0.82
LINC01088-209ENST00000512130 SIX5Q8N196 739 aa9.93□□□□□ -0.82
LINC01088-209ENST00000512130 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms