RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 NFAT5O94916 1531 aa13.75□□□□□ -0.21
SUB1-210ENST00000511988 SPATA31A3Q5VYP0 1347 aa13.75□□□□□ -0.21
SUB1-210ENST00000511988 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
SUB1-210ENST00000511988 ABTB2Q8N961 1025 aa13.75□□□□□ -0.21
SUB1-210ENST00000511988 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
SUB1-210ENST00000511988 USP19O94966 1318 aa13.74□□□□□ -0.21
SUB1-210ENST00000511988 PPP2R1AP30153 589 aa13.74□□□□□ -0.21
SUB1-210ENST00000511988 ZNF784Q8NCA9 323 aaPredicted RBP13.74□□□□□ -0.21
SUB1-210ENST00000511988 LTN1O94822 1766 aa13.73□□□□□ -0.21
SUB1-210ENST00000511988 NLRP6P59044 892 aa13.73□□□□□ -0.21
SUB1-210ENST00000511988 C1QTNF8P60827 252 aa13.73□□□□□ -0.21
SUB1-210ENST00000511988 DCAF8L1A6NGE4 600 aa13.72□□□□□ -0.21
SUB1-210ENST00000511988 BAG6P46379 1132 aa13.72□□□□□ -0.21
SUB1-210ENST00000511988 ABCC6O95255 1503 aa13.72□□□□□ -0.21
SUB1-210ENST00000511988 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.21
SUB1-210ENST00000511988 KCNH5Q8NCM2 988 aa13.71□□□□□ -0.21
SUB1-210ENST00000511988 RTL1A6NKG5 1358 aa13.71□□□□□ -0.22
SUB1-210ENST00000511988 CEP350Q5VT06 3117 aa13.7□□□□□ -0.22
SUB1-210ENST00000511988 TNNT2P45379 298 aaPredicted RBP13.7□□□□□ -0.22
SUB1-210ENST00000511988 LMOD2Q6P5Q4 547 aa13.7□□□□□ -0.22
SUB1-210ENST00000511988 MRS2Q9HD23 443 aa13.7□□□□□ -0.22
SUB1-210ENST00000511988 PEAK1Q9H792 1746 aa13.7□□□□□ -0.22
SUB1-210ENST00000511988 COL3A1P02461 1466 aaPredicted RBP13.69□□□□□ -0.22
SUB1-210ENST00000511988 NUTM2GQ5VZR2 741 aa13.68□□□□□ -0.22
SUB1-210ENST00000511988 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
SUB1-210ENST00000511988 INSRP06213 1382 aa13.68□□□□□ -0.22
SUB1-210ENST00000511988 EN1Q05925 392 aaPredicted RBP13.67□□□□□ -0.22
SUB1-210ENST00000511988 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
SUB1-210ENST00000511988 FLT4P35916 1363 aa13.67□□□□□ -0.22
SUB1-210ENST00000511988 GLI3P10071 1580 aa13.66□□□□□ -0.22
SUB1-210ENST00000511988 MTHFSP49914 203 aa13.66□□□□□ -0.22
SUB1-210ENST00000511988 POLKQ9UBT6 870 aa13.66□□□□□ -0.22
SUB1-210ENST00000511988 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.22
SUB1-210ENST00000511988 GCP02774 474 aa13.65□□□□□ -0.22
SUB1-210ENST00000511988 CPDO75976 1380 aa13.65□□□□□ -0.22
SUB1-210ENST00000511988 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
SUB1-210ENST00000511988 FAM208AQ9UK61 1670 aaKnown RBP13.64□□□□□ -0.23
SUB1-210ENST00000511988 RRS1Q15050 365 aaKnown RBP13.64□□□□□ -0.23
SUB1-210ENST00000511988 EMILIN1Q9Y6C2 1016 aa13.64□□□□□ -0.23
SUB1-210ENST00000511988 SOX12O15370 315 aa13.63□□□□□ -0.23
SUB1-210ENST00000511988 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
SUB1-210ENST00000511988 KRT27Q7Z3Y8 459 aa13.63□□□□□ -0.23
SUB1-210ENST00000511988 PPP1R1BQ9UD71 204 aaPredicted RBP13.63□□□□□ -0.23
SUB1-210ENST00000511988 COL18A1P39060 1754 aa13.63□□□□□ -0.23
SUB1-210ENST00000511988 LMO7Q8WWI1 1683 aa13.63□□□□□ -0.23
SUB1-210ENST00000511988 RGPD1P0DJD0 1748 aa13.62□□□□□ -0.23
SUB1-210ENST00000511988 COL14A1Q05707 1796 aaKnown RBP13.62□□□□□ -0.23
SUB1-210ENST00000511988 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
SUB1-210ENST00000511988 AMPHP49418 695 aa13.61□□□□□ -0.23
SUB1-210ENST00000511988 HAP1P54257 671 aaPredicted RBP13.61□□□□□ -0.23
SUB1-210ENST00000511988 WDR43Q15061 677 aaKnown RBP eCLIP13.61□□□□□ -0.23
SUB1-210ENST00000511988 ARHGEF25Q86VW2 580 aa13.61□□□□□ -0.23
SUB1-210ENST00000511988 UNC5CLQ8IV45 518 aa13.61□□□□□ -0.23
SUB1-210ENST00000511988 UTRNP46939 3433 aa13.61□□□□□ -0.23
SUB1-210ENST00000511988 CAMTA1Q9Y6Y1 1673 aa13.6□□□□□ -0.23
SUB1-210ENST00000511988 FBLN1P23142 703 aa13.6□□□□□ -0.23
SUB1-210ENST00000511988 PNISRQ8TF01 805 aaKnown RBP13.6□□□□□ -0.23
SUB1-210ENST00000511988 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
SUB1-210ENST00000511988 KIAA0232Q92628 1395 aa13.59□□□□□ -0.23
SUB1-210ENST00000511988 RGPD5Q99666 1765 aa13.59□□□□□ -0.23
SUB1-210ENST00000511988 DIAPH1O60610 1272 aaKnown RBP13.59□□□□□ -0.23
SUB1-210ENST00000511988 HOXC9P31274 260 aa13.59□□□□□ -0.23
SUB1-210ENST00000511988 CABLES1Q8TDN4 633 aa13.59□□□□□ -0.23
SUB1-210ENST00000511988 IP6K1Q92551 441 aa13.59□□□□□ -0.23
SUB1-210ENST00000511988 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
SUB1-210ENST00000511988 NWD2Q9ULI1 1742 aa13.57□□□□□ -0.24
SUB1-210ENST00000511988 PLEKHG5O94827 1062 aa13.57□□□□□ -0.24
SUB1-210ENST00000511988 A0A0G2JS52 829 aa13.56□□□□□ -0.24
SUB1-210ENST00000511988 ZC3H6P61129 1189 aaKnown RBP13.56□□□□□ -0.24
SUB1-210ENST00000511988 MYT1Q01538 1121 aa13.56□□□□□ -0.24
SUB1-210ENST00000511988 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
SUB1-210ENST00000511988 HSP90AB2PQ58FF8 381 aa13.56□□□□□ -0.24
SUB1-210ENST00000511988 FAM9BQ8IZU0 186 aa13.56□□□□□ -0.24
SUB1-210ENST00000511988 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
SUB1-210ENST00000511988 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
SUB1-210ENST00000511988 ZBTB7CA1YPR0 619 aa13.55□□□□□ -0.24
SUB1-210ENST00000511988 IL13P35225 146 aa13.55□□□□□ -0.24
SUB1-210ENST00000511988 EIF4A2Q14240 407 aaKnown RBP13.55□□□□□ -0.24
SUB1-210ENST00000511988 CCDC9Q9Y3X0 531 aaKnown RBP13.55□□□□□ -0.24
SUB1-210ENST00000511988 SLIT2O94813 1529 aa13.54□□□□□ -0.24
SUB1-210ENST00000511988 NRAPQ86VF7 1730 aa13.54□□□□□ -0.24
SUB1-210ENST00000511988 ERBB3P21860 1342 aa13.54□□□□□ -0.24
SUB1-210ENST00000511988 NCAPD2Q15021 1401 aa13.54□□□□□ -0.24
SUB1-210ENST00000511988 COL5A2P05997 1499 aaPredicted RBP13.54□□□□□ -0.24
SUB1-210ENST00000511988 RGPD2P0DJD1 1756 aa13.53□□□□□ -0.24
SUB1-210ENST00000511988 U2SURPO15042 1029 aaKnown RBP13.53□□□□□ -0.24
SUB1-210ENST00000511988 U2AF1L5P0DN76 240 aaPredicted RBP13.53□□□□□ -0.24
SUB1-210ENST00000511988 U2AF1Q01081 240 aaKnown RBP eCLIP13.53□□□□□ -0.24
SUB1-210ENST00000511988 SPON1Q9HCB6 807 aa13.53□□□□□ -0.24
SUB1-210ENST00000511988 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
SUB1-210ENST00000511988 KDRP35968 1356 aa13.53□□□□□ -0.24
SUB1-210ENST00000511988 FAM182BQ5T319 152 aa13.52□□□□□ -0.25
SUB1-210ENST00000511988 PNNQ9H307 717 aaKnown RBP13.52□□□□□ -0.25
SUB1-210ENST00000511988 ADAMTS8Q9UP79 889 aa13.52□□□□□ -0.25
SUB1-210ENST00000511988 DISP2A7MBM2 1401 aa13.51□□□□□ -0.25
SUB1-210ENST00000511988 PLEKHG2Q9H7P9 1386 aa13.51□□□□□ -0.25
SUB1-210ENST00000511988 ONECUT3O60422 494 aaPredicted RBP13.51□□□□□ -0.25
SUB1-210ENST00000511988 GIGYF1O75420 1035 aaPredicted RBP13.51□□□□□ -0.25
SUB1-210ENST00000511988 CHRNA2Q15822 529 aa13.51□□□□□ -0.25
SUB1-210ENST00000511988 VPS72Q15906 364 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms