RNA–Protein interactions for RNA: ENST00000511873.6

SMN2-211, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 431 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-211ENST00000511873 HMX1Q9NP08 348 aaPredicted RBP12.28□□□□□ -0.44
SMN2-211ENST00000511873 CCDC116Q8IYX3 515 aa12.27□□□□□ -0.45
SMN2-211ENST00000511873 SLC10A4Q96EP9 437 aa12.27□□□□□ -0.45
SMN2-211ENST00000511873 GPSM3Q9Y4H4 160 aa12.27□□□□□ -0.45
SMN2-211ENST00000511873 EMILIN1Q9Y6C2 1016 aa12.27□□□□□ -0.45
SMN2-211ENST00000511873 CDV3Q9UKY7 258 aaKnown RBP12.26□□□□□ -0.45
SMN2-211ENST00000511873 UPP2O95045 317 aa12.25□□□□□ -0.45
SMN2-211ENST00000511873 NXF1Q9UBU9 619 aaKnown RBP12.25□□□□□ -0.45
SMN2-211ENST00000511873 KCTD15Q96SI1 283 aaPredicted RBP12.24□□□□□ -0.45
SMN2-211ENST00000511873 OCSTAMPQ9BR26 566 aa12.24□□□□□ -0.45
SMN2-211ENST00000511873 C6orf118Q5T5N4 469 aa12.23□□□□□ -0.45
SMN2-211ENST00000511873 ADAM32Q8TC27 787 aa12.23□□□□□ -0.45
SMN2-211ENST00000511873 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
SMN2-211ENST00000511873 BMP2P12643 396 aa12.22□□□□□ -0.45
SMN2-211ENST00000511873 PPP1R26Q5T8A7 1209 aaPredicted RBP12.21□□□□□ -0.45
SMN2-211ENST00000511873 MEIOBQ8N635 442 aa12.21□□□□□ -0.45
SMN2-211ENST00000511873 LINC00528Q8N1L1 170 aa12.2□□□□□ -0.46
SMN2-211ENST00000511873 PGPEP1Q9NXJ5 209 aa12.2□□□□□ -0.46
SMN2-211ENST00000511873 NPAS3Q8IXF0 933 aa12.19□□□□□ -0.46
SMN2-211ENST00000511873 TSEN34Q9BSV6 310 aaKnown RBP12.19□□□□□ -0.46
SMN2-211ENST00000511873 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
SMN2-211ENST00000511873 DHX9Q08211 1270 aaKnown RBP12.18□□□□□ -0.46
SMN2-211ENST00000511873 SOBPA7XYQ1 873 aa12.17□□□□□ -0.46
SMN2-211ENST00000511873 MAN1A2O60476 641 aa12.17□□□□□ -0.46
SMN2-211ENST00000511873 WIPF1O43516 503 aa12.16□□□□□ -0.46
SMN2-211ENST00000511873 VEGFBP49765 207 aa12.16□□□□□ -0.46
SMN2-211ENST00000511873 NBPF20Q3BBV1 942 aa12.16□□□□□ -0.46
SMN2-211ENST00000511873 INTS6LQ5JSJ4 861 aaKnown RBP12.16□□□□□ -0.46
SMN2-211ENST00000511873 DZIP3Q86Y13 1208 aaKnown RBP12.16□□□□□ -0.46
SMN2-211ENST00000511873 LCE2CQ5TA81 110 aa12.15□□□□□ -0.46
SMN2-211ENST00000511873 CBLBQ13191 982 aa12.14□□□□□ -0.47
SMN2-211ENST00000511873 Q6ZVU0 165 aa12.13□□□□□ -0.47
SMN2-211ENST00000511873 IRF7Q92985 503 aa12.13□□□□□ -0.47
SMN2-211ENST00000511873 H3BM21 787 aa12.12□□□□□ -0.47
SMN2-211ENST00000511873 GJD4Q96KN9 370 aaPredicted RBP12.12□□□□□ -0.47
SMN2-211ENST00000511873 RAB15P59190 212 aa12.11□□□□□ -0.47
SMN2-211ENST00000511873 INSM1Q01101 510 aaPredicted RBP12.11□□□□□ -0.47
SMN2-211ENST00000511873 BANK1Q8NDB2 785 aa12.11□□□□□ -0.47
SMN2-211ENST00000511873 SOS2Q07890 1332 aaPredicted RBP12.11□□□□□ -0.47
SMN2-211ENST00000511873 ZBBXA8MT70 800 aa12.09□□□□□ -0.47
SMN2-211ENST00000511873 TMPRSS4Q9NRS4 437 aa12.08□□□□□ -0.48
SMN2-211ENST00000511873 DNMT3LQ9UJW3 386 aa12.08□□□□□ -0.48
SMN2-211ENST00000511873 TTLL8A6PVC2 850 aa12.07□□□□□ -0.48
SMN2-211ENST00000511873 ERVH48-1M5A8F1 160 aa12.06□□□□□ -0.48
SMN2-211ENST00000511873 SPINT1O43278 529 aa12.06□□□□□ -0.48
SMN2-211ENST00000511873 FBXO45P0C2W1 286 aa12.06□□□□□ -0.48
SMN2-211ENST00000511873 GMPRP36959 345 aa12.06□□□□□ -0.48
SMN2-211ENST00000511873 PCDHB9Q9Y5E1 797 aa12.06□□□□□ -0.48
SMN2-211ENST00000511873 ESPNB1AK53 854 aa12.05□□□□□ -0.48
SMN2-211ENST00000511873 RELBQ01201 579 aa12.05□□□□□ -0.48
SMN2-211ENST00000511873 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.05□□□□□ -0.48
SMN2-211ENST00000511873 SEPT12Q8IYM1 358 aa12.05□□□□□ -0.48
SMN2-211ENST00000511873 ZNF784Q8NCA9 323 aaPredicted RBP12.05□□□□□ -0.48
SMN2-211ENST00000511873 AGBL1Q96MI9 1066 aa12.05□□□□□ -0.48
SMN2-211ENST00000511873 ERBB4Q15303 1308 aa12.05□□□□□ -0.48
SMN2-211ENST00000511873 FIGNL2A6NMB9 653 aa12.03□□□□□ -0.48
SMN2-211ENST00000511873 SOCS7O14512 581 aa12.03□□□□□ -0.48
SMN2-211ENST00000511873 MTMR14Q8NCE2 650 aa12.03□□□□□ -0.48
SMN2-211ENST00000511873 SNRKQ9NRH2 765 aa12.03□□□□□ -0.48
SMN2-211ENST00000511873 APBB1O00213 710 aa12.02□□□□□ -0.49
SMN2-211ENST00000511873 PPFIA3O75145 1194 aa12.02□□□□□ -0.49
SMN2-211ENST00000511873 TRIM52Q96A61 297 aa12.02□□□□□ -0.49
SMN2-211ENST00000511873 LILRA1O75019 489 aa12.01□□□□□ -0.49
SMN2-211ENST00000511873 GIGYF1O75420 1035 aaPredicted RBP12.01□□□□□ -0.49
SMN2-211ENST00000511873 ADD1P35611 737 aaKnown RBP12.01□□□□□ -0.49
SMN2-211ENST00000511873 ZNF395Q9H8N7 513 aaPredicted RBP12.01□□□□□ -0.49
SMN2-211ENST00000511873 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
SMN2-211ENST00000511873 NDUFB9Q9Y6M9 179 aa12.01□□□□□ -0.49
SMN2-211ENST00000511873 NR1H3Q13133 447 aa12□□□□□ -0.49
SMN2-211ENST00000511873 ADH1AP07327 375 aa11.99□□□□□ -0.49
SMN2-211ENST00000511873 INSM2Q96T92 566 aaPredicted RBP11.99□□□□□ -0.49
SMN2-211ENST00000511873 ZNF330Q9Y3S2 320 aaPredicted RBP11.99□□□□□ -0.49
SMN2-211ENST00000511873 CTSOP43234 321 aaPredicted RBP11.98□□□□□ -0.49
SMN2-211ENST00000511873 MCCD1P59942 119 aaPredicted RBP11.98□□□□□ -0.49
SMN2-211ENST00000511873 PTSQ03393 145 aa11.98□□□□□ -0.49
SMN2-211ENST00000511873 POLMQ9NP87 494 aaPredicted RBP11.98□□□□□ -0.49
SMN2-211ENST00000511873 VSIG8P0DPA2 414 aa11.97□□□□□ -0.49
SMN2-211ENST00000511873 RNF20Q5VTR2 975 aa11.97□□□□□ -0.49
SMN2-211ENST00000511873 ZNF592Q92610 1267 aa11.97□□□□□ -0.49
SMN2-211ENST00000511873 CYLDQ9NQC7 956 aa11.97□□□□□ -0.49
SMN2-211ENST00000511873 PTGIRP43119 386 aa11.96□□□□□ -0.49
SMN2-211ENST00000511873 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
SMN2-211ENST00000511873 GPR37L1O60883 481 aa11.94□□□□□ -0.5
SMN2-211ENST00000511873 PRKCSHP14314 528 aaPredicted RBP11.94□□□□□ -0.5
SMN2-211ENST00000511873 KDF1Q8NAX2 398 aaPredicted RBP11.94□□□□□ -0.5
SMN2-211ENST00000511873 ZSCAN1Q8NBB4 408 aa11.93□□□□□ -0.5
SMN2-211ENST00000511873 CCDC155Q8N6L0 562 aa11.92□□□□□ -0.5
SMN2-211ENST00000511873 PRM3Q9NNZ6 103 aa11.92□□□□□ -0.5
SMN2-211ENST00000511873 FAM181BA6NEQ2 426 aa11.91□□□□□ -0.5
SMN2-211ENST00000511873 RNF217Q8TC41 542 aa11.91□□□□□ -0.5
SMN2-211ENST00000511873 ATP5J2-PTCD1G3V325 749 aa11.9□□□□□ -0.5
SMN2-211ENST00000511873 SLC35F4A4IF30 521 aa11.89□□□□□ -0.51
SMN2-211ENST00000511873 CC2D2BQ6DHV5 1058 aa11.89□□□□□ -0.51
SMN2-211ENST00000511873 LORP23490 312 aaPredicted RBP11.88□□□□□ -0.51
SMN2-211ENST00000511873 ERVK-9P63128 1117 aa11.88□□□□□ -0.51
SMN2-211ENST00000511873 TBC1D2BQ9UPU7 963 aa11.88□□□□□ -0.51
SMN2-211ENST00000511873 FOXD4L5Q5VV16 416 aaPredicted RBP11.87□□□□□ -0.51
SMN2-211ENST00000511873 LYSMD3Q7Z3D4 306 aa11.87□□□□□ -0.51
SMN2-211ENST00000511873 ESF1Q9H501 851 aaKnown RBP11.87□□□□□ -0.51
SMN2-211ENST00000511873 PCDHB11Q9Y5F2 797 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms