RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 C11orf95C9JLR9 678 aaPredicted RBP22.43■■□□□ 1.18
PDLIM5-216ENST00000511767 COG3Q96JB2 828 aa22.43■■□□□ 1.18
PDLIM5-216ENST00000511767 COL5A2P05997 1499 aaPredicted RBP22.42■■□□□ 1.18
PDLIM5-216ENST00000511767 FBLN1P23142 703 aa22.42■■□□□ 1.18
PDLIM5-216ENST00000511767 COL18A1P39060 1754 aa22.42■■□□□ 1.18
PDLIM5-216ENST00000511767 TOM1L2Q6ZVM7 507 aa22.41■■□□□ 1.18
PDLIM5-216ENST00000511767 WDR17Q8IZU2 1322 aa22.4■■□□□ 1.18
PDLIM5-216ENST00000511767 GGNBP2Q9H3C7 697 aa22.4■■□□□ 1.18
PDLIM5-216ENST00000511767 NFAT5O94916 1531 aa22.4■■□□□ 1.18
PDLIM5-216ENST00000511767 BRWD3Q6RI45 1802 aa22.39■■□□□ 1.17
PDLIM5-216ENST00000511767 FAM182BQ5T319 152 aa22.39■■□□□ 1.17
PDLIM5-216ENST00000511767 POLR3GLQ9BT43 218 aa22.39■■□□□ 1.17
PDLIM5-216ENST00000511767 OVOS2A0A0J9YW53 1432 aa22.39■■□□□ 1.17
PDLIM5-216ENST00000511767 OVOS2Q6IE36 1432 aa22.39■■□□□ 1.17
PDLIM5-216ENST00000511767 CARD10Q9BWT7 1032 aa22.38■■□□□ 1.17
PDLIM5-216ENST00000511767 CRB1P82279 1406 aa22.38■■□□□ 1.17
PDLIM5-216ENST00000511767 IP6K1Q92551 441 aa22.37■■□□□ 1.17
PDLIM5-216ENST00000511767 CSB-PGBD3P0DP91 1061 aa22.36■■□□□ 1.17
PDLIM5-216ENST00000511767 USP54Q70EL1 1684 aa22.34■■□□□ 1.17
PDLIM5-216ENST00000511767 PDE3BQ13370 1112 aa22.34■■□□□ 1.17
PDLIM5-216ENST00000511767 PANK3Q9H999 370 aa22.34■■□□□ 1.17
PDLIM5-216ENST00000511767 EP400Q96L91 3159 aa22.34■■□□□ 1.17
PDLIM5-216ENST00000511767 MAP3K19Q56UN5 1328 aa22.32■■□□□ 1.16
PDLIM5-216ENST00000511767 FAM196AQ6ZSG2 479 aa22.32■■□□□ 1.16
PDLIM5-216ENST00000511767 ANKRD24Q8TF21 1146 aa22.32■■□□□ 1.16
PDLIM5-216ENST00000511767 THSD7AQ9UPZ6 1657 aa22.31■■□□□ 1.16
PDLIM5-216ENST00000511767 CDCA7Q9BWT1 371 aaPredicted RBP22.31■■□□□ 1.16
PDLIM5-216ENST00000511767 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
PDLIM5-216ENST00000511767 NLRP2Q9NX02 1062 aa22.3■■□□□ 1.16
PDLIM5-216ENST00000511767 RGPD5Q99666 1765 aa22.3■■□□□ 1.16
PDLIM5-216ENST00000511767 ERBB3P21860 1342 aa22.3■■□□□ 1.16
PDLIM5-216ENST00000511767 HOXC9P31274 260 aa22.29■■□□□ 1.16
PDLIM5-216ENST00000511767 AMPHP49418 695 aa22.29■■□□□ 1.16
PDLIM5-216ENST00000511767 RRS1Q15050 365 aaKnown RBP22.29■■□□□ 1.16
PDLIM5-216ENST00000511767 DEFB132Q7Z7B7 95 aa22.29■■□□□ 1.16
PDLIM5-216ENST00000511767 DDB1Q16531 1140 aa22.28■■□□□ 1.16
PDLIM5-216ENST00000511767 NSD3Q9BZ95 1437 aa22.28■■□□□ 1.16
PDLIM5-216ENST00000511767 SF3B2Q13435 895 aaKnown RBP22.27■■□□□ 1.16
PDLIM5-216ENST00000511767 CGNL1Q0VF96 1302 aa22.27■■□□□ 1.16
PDLIM5-216ENST00000511767 ABCC6O95255 1503 aa22.26■■□□□ 1.15
PDLIM5-216ENST00000511767 EXOC5O00471 708 aa22.26■■□□□ 1.15
PDLIM5-216ENST00000511767 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
PDLIM5-216ENST00000511767 CCDC7Q96M83 1385 aa22.25■■□□□ 1.15
PDLIM5-216ENST00000511767 MYOM1P52179 1685 aa22.24■■□□□ 1.15
PDLIM5-216ENST00000511767 TRIM37O94972 964 aa22.24■■□□□ 1.15
PDLIM5-216ENST00000511767 MARCH10Q8NA82 808 aaPredicted RBP22.24■■□□□ 1.15
PDLIM5-216ENST00000511767 KIF7Q2M1P5 1343 aa22.24■■□□□ 1.15
PDLIM5-216ENST00000511767 HSP90AB2PQ58FF8 381 aa22.23■■□□□ 1.15
PDLIM5-216ENST00000511767 LTN1O94822 1766 aa22.21■■□□□ 1.15
PDLIM5-216ENST00000511767 DISP2A7MBM2 1401 aa22.21■■□□□ 1.15
PDLIM5-216ENST00000511767 IL2RBP14784 551 aa22.2■■□□□ 1.14
PDLIM5-216ENST00000511767 BAG6P46379 1132 aa22.2■■□□□ 1.14
PDLIM5-216ENST00000511767 EN1Q05925 392 aaPredicted RBP22.19■■□□□ 1.14
PDLIM5-216ENST00000511767 NBPF6Q5VWK0 638 aa22.19■■□□□ 1.14
PDLIM5-216ENST00000511767 NBPF4Q96M43 638 aa22.19■■□□□ 1.14
PDLIM5-216ENST00000511767 POLKQ9UBT6 870 aa22.19■■□□□ 1.14
PDLIM5-216ENST00000511767 EMILIN1Q9Y6C2 1016 aa22.19■■□□□ 1.14
PDLIM5-216ENST00000511767 PER1O15534 1290 aaPredicted RBP22.17■■□□□ 1.14
PDLIM5-216ENST00000511767 INSRP06213 1382 aa22.16■■□□□ 1.14
PDLIM5-216ENST00000511767 KIF24Q5T7B8 1368 aa22.16■■□□□ 1.14
PDLIM5-216ENST00000511767 APBA3O96018 575 aa22.16■■□□□ 1.14
PDLIM5-216ENST00000511767 CAMKK2Q96RR4 588 aa22.16■■□□□ 1.14
PDLIM5-216ENST00000511767 KNSTRNQ9Y448 316 aa22.16■■□□□ 1.14
PDLIM5-216ENST00000511767 PARP4Q9UKK3 1724 aaKnown RBP22.16■■□□□ 1.14
PDLIM5-216ENST00000511767 RTL1A6NKG5 1358 aa22.15■■□□□ 1.14
PDLIM5-216ENST00000511767 WASHC2AQ641Q2 1341 aa22.15■■□□□ 1.14
PDLIM5-216ENST00000511767 PPM1GO15355 546 aaPredicted RBP22.14■■□□□ 1.13
PDLIM5-216ENST00000511767 TNNT2P45379 298 aaPredicted RBP22.14■■□□□ 1.13
PDLIM5-216ENST00000511767 EZH2Q15910 746 aaKnown RBP22.13■■□□□ 1.13
PDLIM5-216ENST00000511767 AMER1Q5JTC6 1135 aaPredicted RBP22.13■■□□□ 1.13
PDLIM5-216ENST00000511767 PTF1AQ7RTS3 328 aa22.13■■□□□ 1.13
PDLIM5-216ENST00000511767 FLT4P35916 1363 aa22.12■■□□□ 1.13
PDLIM5-216ENST00000511767 BCL11BQ9C0K0 894 aaPredicted RBP22.12■■□□□ 1.13
PDLIM5-216ENST00000511767 KIF20BQ96Q89 1820 aa22.12■■□□□ 1.13
PDLIM5-216ENST00000511767 BCL9O00512 1426 aa22.12■■□□□ 1.13
PDLIM5-216ENST00000511767 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
PDLIM5-216ENST00000511767 OVOS2A0A0G2JMS6 1433 aa22.1■■□□□ 1.13
PDLIM5-216ENST00000511767 USHBP1Q8N6Y0 703 aa22.09■■□□□ 1.13
PDLIM5-216ENST00000511767 PLSCR1O15162 318 aa22.08■■□□□ 1.13
PDLIM5-216ENST00000511767 ZCRB1Q8TBF4 217 aaKnown RBP22.08■■□□□ 1.13
PDLIM5-216ENST00000511767 DDX54Q8TDD1 881 aaKnown RBP22.08■■□□□ 1.13
PDLIM5-216ENST00000511767 NSD2O96028 1365 aa22.08■■□□□ 1.12
PDLIM5-216ENST00000511767 LRRC37A3O60309 1634 aa22.07■■□□□ 1.12
PDLIM5-216ENST00000511767 KCNQ2O43526 872 aa22.07■■□□□ 1.12
PDLIM5-216ENST00000511767 PEAK1Q9H792 1746 aa22.06■■□□□ 1.12
PDLIM5-216ENST00000511767 MAP2P11137 1827 aaKnown RBP22.06■■□□□ 1.12
PDLIM5-216ENST00000511767 EYA1Q99502 592 aa22.06■■□□□ 1.12
PDLIM5-216ENST00000511767 TNS2Q63HR2 1409 aa22.05■■□□□ 1.12
PDLIM5-216ENST00000511767 RGPD1P0DJD0 1748 aa22.04■■□□□ 1.12
PDLIM5-216ENST00000511767 RAPGEF4Q8WZA2 1011 aa22.04■■□□□ 1.12
PDLIM5-216ENST00000511767 TATP17735 454 aaPredicted RBP22.03■■□□□ 1.12
PDLIM5-216ENST00000511767 EIF4A2Q14240 407 aaKnown RBP22.03■■□□□ 1.12
PDLIM5-216ENST00000511767 PROM2Q8N271 834 aa22.03■■□□□ 1.12
PDLIM5-216ENST00000511767 ACSBG1Q96GR2 724 aa22.03■■□□□ 1.12
PDLIM5-216ENST00000511767 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
PDLIM5-216ENST00000511767 WNK3Q9BYP7 1800 aa22.03■■□□□ 1.12
PDLIM5-216ENST00000511767 RGPD2P0DJD1 1756 aa22.02■■□□□ 1.12
PDLIM5-216ENST00000511767 PARD3Q8TEW0 1356 aa22.01■■□□□ 1.11
PDLIM5-216ENST00000511767 TNS1Q9HBL0 1735 aaKnown RBP22■■□□□ 1.11
PDLIM5-216ENST00000511767 CC2D1BQ5T0F9 858 aaKnown RBP22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms