RNA–Protein interactions for RNA: ENST00000511708.1

COPS4-210, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 3

Gene COPS4, Length 824 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-210ENST00000511708 ARHGEF28Q8N1W1 1705 aaKnown RBP17.89■□□□□ 0.45
COPS4-210ENST00000511708 DDB1Q16531 1140 aa17.88■□□□□ 0.45
COPS4-210ENST00000511708 TXNRD1Q16881 649 aa17.88■□□□□ 0.45
COPS4-210ENST00000511708 AATKQ6ZMQ8 1374 aa17.88■□□□□ 0.45
COPS4-210ENST00000511708 ARXQ96QS3 562 aa17.86■□□□□ 0.45
COPS4-210ENST00000511708 ACEP12821 1306 aa17.86■□□□□ 0.45
COPS4-210ENST00000511708 PAPPAQ13219 1627 aa17.85■□□□□ 0.45
COPS4-210ENST00000511708 ABTB2Q8N961 1025 aa17.85■□□□□ 0.45
COPS4-210ENST00000511708 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
COPS4-210ENST00000511708 COL18A1P39060 1754 aa17.84■□□□□ 0.45
COPS4-210ENST00000511708 GCP02774 474 aa17.84■□□□□ 0.45
COPS4-210ENST00000511708 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
COPS4-210ENST00000511708 PLEKHG3A1L390 1219 aa17.83■□□□□ 0.44
COPS4-210ENST00000511708 GPR162Q16538 588 aa17.81■□□□□ 0.44
COPS4-210ENST00000511708 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
COPS4-210ENST00000511708 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
COPS4-210ENST00000511708 NHSQ6T4R5 1651 aa17.8■□□□□ 0.44
COPS4-210ENST00000511708 SLIT3O75094 1523 aa17.79■□□□□ 0.44
COPS4-210ENST00000511708 CDCA7Q9BWT1 371 aaPredicted RBP17.79■□□□□ 0.44
COPS4-210ENST00000511708 CDK19Q9BWU1 502 aa17.79■□□□□ 0.44
COPS4-210ENST00000511708 QSER1Q2KHR3 1735 aa17.78■□□□□ 0.44
COPS4-210ENST00000511708 RGPD5Q99666 1765 aa17.77■□□□□ 0.44
COPS4-210ENST00000511708 TOM1L2Q6ZVM7 507 aa17.77■□□□□ 0.44
COPS4-210ENST00000511708 WDR17Q8IZU2 1322 aa17.76■□□□□ 0.43
COPS4-210ENST00000511708 BRD4O60885 1362 aaPredicted RBP17.74■□□□□ 0.43
COPS4-210ENST00000511708 BTAF1O14981 1849 aa17.73■□□□□ 0.43
COPS4-210ENST00000511708 AXIN2Q9Y2T1 843 aa17.73■□□□□ 0.43
COPS4-210ENST00000511708 ZNF827Q17R98 1081 aa17.72■□□□□ 0.43
COPS4-210ENST00000511708 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
COPS4-210ENST00000511708 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
COPS4-210ENST00000511708 TNS2Q63HR2 1409 aa17.71■□□□□ 0.43
COPS4-210ENST00000511708 PIK3C2AO00443 1686 aa17.71■□□□□ 0.42
COPS4-210ENST00000511708 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
COPS4-210ENST00000511708 SLC16A10Q8TF71 515 aa17.7■□□□□ 0.42
COPS4-210ENST00000511708 CARD10Q9BWT7 1032 aa17.7■□□□□ 0.42
COPS4-210ENST00000511708 CPSF1Q10570 1443 aaKnown RBP17.7■□□□□ 0.42
COPS4-210ENST00000511708 KAT6BQ8WYB5 2073 aa17.7■□□□□ 0.42
COPS4-210ENST00000511708 EXOC5O00471 708 aa17.69■□□□□ 0.42
COPS4-210ENST00000511708 HSPA6P17066 643 aa17.69■□□□□ 0.42
COPS4-210ENST00000511708 NLGN2Q8NFZ4 835 aa17.69■□□□□ 0.42
COPS4-210ENST00000511708 STAC3Q96MF2 364 aa17.69■□□□□ 0.42
COPS4-210ENST00000511708 KDM2AQ9Y2K7 1162 aa17.69■□□□□ 0.42
COPS4-210ENST00000511708 PPIP5K1Q6PFW1 1433 aa17.69■□□□□ 0.42
COPS4-210ENST00000511708 ATP10DQ9P241 1426 aa17.69■□□□□ 0.42
COPS4-210ENST00000511708 ABCC6O95255 1503 aa17.68■□□□□ 0.42
COPS4-210ENST00000511708 USP6P35125 1406 aa17.68■□□□□ 0.42
COPS4-210ENST00000511708 NLRP6P59044 892 aa17.68■□□□□ 0.42
COPS4-210ENST00000511708 PELP1Q8IZL8 1130 aaKnown RBP17.68■□□□□ 0.42
COPS4-210ENST00000511708 DCAF11Q8TEB1 546 aa17.68■□□□□ 0.42
COPS4-210ENST00000511708 YBX3P16989 372 aaKnown RBP eCLIP17.67■□□□□ 0.42
COPS4-210ENST00000511708 AKT1S1Q96B36 256 aa17.67■□□□□ 0.42
COPS4-210ENST00000511708 LRRC4BQ9NT99 713 aa17.67■□□□□ 0.42
COPS4-210ENST00000511708 GRIN3BO60391 1043 aa17.66■□□□□ 0.42
COPS4-210ENST00000511708 POLD1P28340 1107 aa17.66■□□□□ 0.42
COPS4-210ENST00000511708 ARHGEF25Q86VW2 580 aa17.66■□□□□ 0.42
COPS4-210ENST00000511708 KLHL34Q8N239 644 aa17.66■□□□□ 0.42
COPS4-210ENST00000511708 CCDC7Q96M83 1385 aa17.65■□□□□ 0.42
COPS4-210ENST00000511708 ACSBG1Q96GR2 724 aa17.64■□□□□ 0.41
COPS4-210ENST00000511708 PNPLA7Q6ZV29 1317 aa17.64■□□□□ 0.41
COPS4-210ENST00000511708 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.41
COPS4-210ENST00000511708 KIAA1210Q9ULL0 1709 aa17.63■□□□□ 0.41
COPS4-210ENST00000511708 ADCY9O60503 1353 aa17.63■□□□□ 0.41
COPS4-210ENST00000511708 CSB-PGBD3P0DP91 1061 aa17.61■□□□□ 0.41
COPS4-210ENST00000511708 GPBP1L1Q9HC44 474 aaPredicted RBP17.61■□□□□ 0.41
COPS4-210ENST00000511708 SRPK2P78362 688 aaKnown RBP17.6■□□□□ 0.41
COPS4-210ENST00000511708 NFAT5O94916 1531 aa17.6■□□□□ 0.41
COPS4-210ENST00000511708 CABP2Q9NPB3 220 aa17.59■□□□□ 0.41
COPS4-210ENST00000511708 SLC27A3Q5K4L6 730 aa17.58■□□□□ 0.4
COPS4-210ENST00000511708 KCNH5Q8NCM2 988 aa17.58■□□□□ 0.4
COPS4-210ENST00000511708 LY75O60449 1722 aa17.58■□□□□ 0.4
COPS4-210ENST00000511708 CABP1Q9NZU7 370 aa17.57■□□□□ 0.4
COPS4-210ENST00000511708 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
COPS4-210ENST00000511708 ERBB3P21860 1342 aa17.52■□□□□ 0.4
COPS4-210ENST00000511708 TTC21BQ7Z4L5 1316 aa17.52■□□□□ 0.4
COPS4-210ENST00000511708 CENPJQ9HC77 1338 aaPredicted RBP17.52■□□□□ 0.4
COPS4-210ENST00000511708 IL2RBP14784 551 aa17.52■□□□□ 0.4
COPS4-210ENST00000511708 KIF3CO14782 793 aa17.51■□□□□ 0.39
COPS4-210ENST00000511708 DNAJC5GQ8N7S2 189 aa17.51■□□□□ 0.39
COPS4-210ENST00000511708 ZNF526Q8TF50 670 aaPredicted RBP17.51■□□□□ 0.39
COPS4-210ENST00000511708 SOX12O15370 315 aa17.5■□□□□ 0.39
COPS4-210ENST00000511708 NBPF1Q3BBV0 1214 aa17.5■□□□□ 0.39
COPS4-210ENST00000511708 USP54Q70EL1 1684 aa17.5■□□□□ 0.39
COPS4-210ENST00000511708 LTN1O94822 1766 aa17.5■□□□□ 0.39
COPS4-210ENST00000511708 APLP1P51693 650 aa17.49■□□□□ 0.39
COPS4-210ENST00000511708 KCNQ4P56696 695 aa17.49■□□□□ 0.39
COPS4-210ENST00000511708 CD2APQ9Y5K6 639 aa17.49■□□□□ 0.39
COPS4-210ENST00000511708 TTC21AQ8NDW8 1320 aa17.48■□□□□ 0.39
COPS4-210ENST00000511708 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
COPS4-210ENST00000511708 NLRP2Q9NX02 1062 aa17.48■□□□□ 0.39
COPS4-210ENST00000511708 COL23A1Q86Y22 540 aaPredicted RBP17.47■□□□□ 0.39
COPS4-210ENST00000511708 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
COPS4-210ENST00000511708 RAB3GAP2Q9H2M9 1393 aa17.47■□□□□ 0.39
COPS4-210ENST00000511708 NSD2O96028 1365 aa17.46■□□□□ 0.39
COPS4-210ENST00000511708 MON2Q7Z3U7 1717 aa17.45■□□□□ 0.38
COPS4-210ENST00000511708 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
COPS4-210ENST00000511708 ANKRD36BQ8N2N9 1353 aa17.44■□□□□ 0.38
COPS4-210ENST00000511708 MSL1Q68DK7 614 aa17.43■□□□□ 0.38
COPS4-210ENST00000511708 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
COPS4-210ENST00000511708 USP31Q70CQ4 1352 aa17.42■□□□□ 0.38
COPS4-210ENST00000511708 COL13A1Q5TAT6 717 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms