RNA–Protein interactions for RNA: ENST00000510806.1

SH3RF1-204, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 591 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-204ENST00000510806 C19orf44Q9H6X5 657 aa9.43□□□□□ -0.9
SH3RF1-204ENST00000510806 PTPRUQ92729 1446 aa9.42□□□□□ -0.9
SH3RF1-204ENST00000510806 ITGAEP38570 1179 aa9.42□□□□□ -0.9
SH3RF1-204ENST00000510806 NUTM2DQ5VT03 806 aaPredicted RBP9.42□□□□□ -0.9
SH3RF1-204ENST00000510806 PPARGC1BQ86YN6 1023 aaKnown RBP9.42□□□□□ -0.9
SH3RF1-204ENST00000510806 NAIPQ13075 1403 aa9.41□□□□□ -0.9
SH3RF1-204ENST00000510806 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
SH3RF1-204ENST00000510806 BBXQ8WY36 941 aaPredicted RBP9.41□□□□□ -0.9
SH3RF1-204ENST00000510806 AMOTL2Q9Y2J4 779 aa9.41□□□□□ -0.9
SH3RF1-204ENST00000510806 BCAMP50895 628 aa9.4□□□□□ -0.9
SH3RF1-204ENST00000510806 EPAS1Q99814 870 aa9.4□□□□□ -0.9
SH3RF1-204ENST00000510806 KIAA1468Q9P260 1216 aa9.4□□□□□ -0.9
SH3RF1-204ENST00000510806 NRXN3Q9Y4C0 1643 aa9.4□□□□□ -0.9
SH3RF1-204ENST00000510806 SETBP1Q9Y6X0 1596 aa9.4□□□□□ -0.9
SH3RF1-204ENST00000510806 TRPM2O94759 1503 aa9.4□□□□□ -0.91
SH3RF1-204ENST00000510806 SPHKAPQ2M3C7 1700 aa9.39□□□□□ -0.91
SH3RF1-204ENST00000510806 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.39□□□□□ -0.91
SH3RF1-204ENST00000510806 A0A0G2JS52 829 aa9.39□□□□□ -0.91
SH3RF1-204ENST00000510806 POTEAQ6S8J7 498 aa9.39□□□□□ -0.91
SH3RF1-204ENST00000510806 DDX12PQ92771 950 aa9.39□□□□□ -0.91
SH3RF1-204ENST00000510806 JCADQ9P266 1359 aa9.38□□□□□ -0.91
SH3RF1-204ENST00000510806 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
SH3RF1-204ENST00000510806 HFM1A2PYH4 1435 aa9.38□□□□□ -0.91
SH3RF1-204ENST00000510806 DCCP43146 1447 aa9.38□□□□□ -0.91
SH3RF1-204ENST00000510806 COL16A1Q07092 1604 aaPredicted RBP9.38□□□□□ -0.91
SH3RF1-204ENST00000510806 METP08581 1390 aa9.37□□□□□ -0.91
SH3RF1-204ENST00000510806 PHLPP1O60346 1717 aa9.37□□□□□ -0.91
SH3RF1-204ENST00000510806 XRN1Q8IZH2 1706 aaKnown RBP9.37□□□□□ -0.91
SH3RF1-204ENST00000510806 ATF3P18847 181 aa9.37□□□□□ -0.91
SH3RF1-204ENST00000510806 LAPTM4BQ86VI4 370 aa9.37□□□□□ -0.91
SH3RF1-204ENST00000510806 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-204ENST00000510806 AHDC1Q5TGY3 1603 aaPredicted RBP9.37□□□□□ -0.91
SH3RF1-204ENST00000510806 NEXMIFQ5QGS0 1516 aa9.36□□□□□ -0.91
SH3RF1-204ENST00000510806 SPATA31A6Q5VVP1 1343 aa9.36□□□□□ -0.91
SH3RF1-204ENST00000510806 CLTCL1P53675 1640 aa9.36□□□□□ -0.91
SH3RF1-204ENST00000510806 SOWAHBA6NEL2 793 aa9.36□□□□□ -0.91
SH3RF1-204ENST00000510806 PDIA6Q15084 440 aa9.36□□□□□ -0.91
SH3RF1-204ENST00000510806 BRINP3Q76B58 766 aa9.36□□□□□ -0.91
SH3RF1-204ENST00000510806 ZFRQ96KR1 1074 aaKnown RBP9.36□□□□□ -0.91
SH3RF1-204ENST00000510806 RPGRIP1LQ68CZ1 1315 aa9.35□□□□□ -0.91
SH3RF1-204ENST00000510806 TRIM6-TRIM34B2RNG4 842 aa9.35□□□□□ -0.91
SH3RF1-204ENST00000510806 ONECUT3O60422 494 aaPredicted RBP9.35□□□□□ -0.91
SH3RF1-204ENST00000510806 ITGBL1O95965 494 aaPredicted RBP9.35□□□□□ -0.91
SH3RF1-204ENST00000510806 ZNF326Q5BKZ1 582 aaKnown RBP9.35□□□□□ -0.91
SH3RF1-204ENST00000510806 C14orf37Q86TY3 774 aa9.35□□□□□ -0.91
SH3RF1-204ENST00000510806 MST1RQ04912 1400 aa9.34□□□□□ -0.91
SH3RF1-204ENST00000510806 PRAG1Q86YV5 1406 aa9.34□□□□□ -0.91
SH3RF1-204ENST00000510806 TSR1Q2NL82 804 aaKnown RBP9.34□□□□□ -0.91
SH3RF1-204ENST00000510806 PRIM1P49642 420 aaKnown RBP9.33□□□□□ -0.92
SH3RF1-204ENST00000510806 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
SH3RF1-204ENST00000510806 KIF1BO60333 1816 aa9.33□□□□□ -0.92
SH3RF1-204ENST00000510806 SETD5Q9C0A6 1442 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 ADGRL3Q9HAR2 1447 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 LRP6O75581 1613 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 RGS20O76081 388 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 NBR1Q14596 966 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 WBP1LQ9NX94 342 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 TSKSQ9UJT2 592 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 SHPRHQ149N8 1683 aa9.32□□□□□ -0.92
SH3RF1-204ENST00000510806 SETD1AO15047 1707 aaKnown RBP9.31□□□□□ -0.92
SH3RF1-204ENST00000510806 TRIM52Q96A61 297 aa9.31□□□□□ -0.92
SH3RF1-204ENST00000510806 ASXL1Q8IXJ9 1541 aa9.31□□□□□ -0.92
SH3RF1-204ENST00000510806 PTCH1Q13635 1447 aa9.31□□□□□ -0.92
SH3RF1-204ENST00000510806 FAM98CQ17RN3 349 aaKnown RBP9.3□□□□□ -0.92
SH3RF1-204ENST00000510806 LRRC59Q96AG4 307 aaKnown RBP9.3□□□□□ -0.92
SH3RF1-204ENST00000510806 NHSL1Q5SYE7 1610 aa9.3□□□□□ -0.92
SH3RF1-204ENST00000510806 ROBO2Q9HCK4 1378 aa9.29□□□□□ -0.92
SH3RF1-204ENST00000510806 ZNF772Q68DY9 489 aaPredicted RBP9.29□□□□□ -0.92
SH3RF1-204ENST00000510806 SPRYD3Q8NCJ5 442 aa9.29□□□□□ -0.92
SH3RF1-204ENST00000510806 LAMC1P11047 1609 aa9.29□□□□□ -0.92
SH3RF1-204ENST00000510806 C1orf167Q5SNV9 1468 aa9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 NALCNQ8IZF0 1738 aa9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 PPLO60437 1756 aa9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 MAP3K7O43318 606 aa9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 MPHOSPH9Q99550 1183 aa9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 FAM198AQ9UFP1 575 aa9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 SPATA31E1Q6ZUB1 1445 aa9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 SOS2Q07890 1332 aaPredicted RBP9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 ACIN1Q9UKV3 1341 aaKnown RBP9.28□□□□□ -0.92
SH3RF1-204ENST00000510806 C3orf80F5H4A9 247 aa9.27□□□□□ -0.93
SH3RF1-204ENST00000510806 PNPLA6Q8IY17 1366 aa9.26□□□□□ -0.93
SH3RF1-204ENST00000510806 SPDYE16A6NNV3 312 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-204ENST00000510806 DDX17Q92841 729 aaKnown RBP9.26□□□□□ -0.93
SH3RF1-204ENST00000510806 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
SH3RF1-204ENST00000510806 ADGRF5Q8IZF2 1346 aa9.26□□□□□ -0.93
SH3RF1-204ENST00000510806 ANKRD30BQ9BXX2 1392 aa9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 TECPR2O15040 1411 aa9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 E2F4Q16254 413 aa9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 MEX3CQ5U5Q3 659 aaKnown RBP9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 NYAP1Q6ZVC0 841 aa9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 ORAI2Q96SN7 254 aa9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 CDK12Q9NYV4 1490 aaPredicted RBP9.25□□□□□ -0.93
SH3RF1-204ENST00000510806 ABCC11Q96J66 1382 aa9.24□□□□□ -0.93
SH3RF1-204ENST00000510806 CCDC144AA2RUR9 1427 aa9.24□□□□□ -0.93
SH3RF1-204ENST00000510806 RXRBP28702 533 aa9.24□□□□□ -0.93
SH3RF1-204ENST00000510806 LRCH3Q96II8 777 aa9.24□□□□□ -0.93
SH3RF1-204ENST00000510806 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.24□□□□□ -0.93
SH3RF1-204ENST00000510806 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms