RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 MEIOBQ8N635 442 aa10.2□□□□□ -0.78
ARHGEF28-209ENST00000510131 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
ARHGEF28-209ENST00000510131 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
ARHGEF28-209ENST00000510131 AP1G2O75843 785 aa10.19□□□□□ -0.78
ARHGEF28-209ENST00000510131 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
ARHGEF28-209ENST00000510131 MAN1A2O60476 641 aa10.18□□□□□ -0.78
ARHGEF28-209ENST00000510131 ZC3H4Q9UPT8 1303 aaKnown RBP10.17□□□□□ -0.78
ARHGEF28-209ENST00000510131 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
ARHGEF28-209ENST00000510131 SLC10A4Q96EP9 437 aa10.16□□□□□ -0.78
ARHGEF28-209ENST00000510131 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF28-209ENST00000510131 KCTD15Q96SI1 283 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF28-209ENST00000510131 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
ARHGEF28-209ENST00000510131 SOS2Q07890 1332 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 PTK2Q05397 1052 aa10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 CDV3Q9UKY7 258 aaKnown RBP10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 EPS8L1Q8TE68 723 aa10.13□□□□□ -0.79
ARHGEF28-209ENST00000510131 OCSTAMPQ9BR26 566 aa10.13□□□□□ -0.79
ARHGEF28-209ENST00000510131 CBLBQ13191 982 aa10.12□□□□□ -0.79
ARHGEF28-209ENST00000510131 DNMT3LQ9UJW3 386 aa10.12□□□□□ -0.79
ARHGEF28-209ENST00000510131 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
ARHGEF28-209ENST00000510131 USP17L8P0C7I0 530 aa10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 ZSCAN1Q8NBB4 408 aa10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 PPFIA3O75145 1194 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 RFC5P40937 340 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 DHX9Q08211 1270 aaKnown RBP10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 Q6ZVU0 165 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 PNMA1Q8ND90 353 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
ARHGEF28-209ENST00000510131 INTS6LQ5JSJ4 861 aaKnown RBP10.09□□□□□ -0.79
ARHGEF28-209ENST00000510131 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
ARHGEF28-209ENST00000510131 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
ARHGEF28-209ENST00000510131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.8
ARHGEF28-209ENST00000510131 PCMTD1Q96MG8 357 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF28-209ENST00000510131 FIGNL2A6NMB9 653 aa10.06□□□□□ -0.8
ARHGEF28-209ENST00000510131 SPINT1O43278 529 aa10.06□□□□□ -0.8
ARHGEF28-209ENST00000510131 GOPCQ9HD26 462 aa10.06□□□□□ -0.8
ARHGEF28-209ENST00000510131 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
ARHGEF28-209ENST00000510131 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
ARHGEF28-209ENST00000510131 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
ARHGEF28-209ENST00000510131 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
ARHGEF28-209ENST00000510131 RAB15P59190 212 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 PTSQ03393 145 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 TMPRSS4Q9NRS4 437 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 RELBQ01201 579 aa10.02□□□□□ -0.81
ARHGEF28-209ENST00000510131 IL27Q8NEV9 243 aa10.02□□□□□ -0.81
ARHGEF28-209ENST00000510131 TRIM34Q9BYJ4 488 aa10.02□□□□□ -0.81
ARHGEF28-209ENST00000510131 CTSOP43234 321 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-209ENST00000510131 ZNF784Q8NCA9 323 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-209ENST00000510131 INSM2Q96T92 566 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-209ENST00000510131 ESPNB1AK53 854 aa9.99□□□□□ -0.81
ARHGEF28-209ENST00000510131 ERVH48-1M5A8F1 160 aa9.99□□□□□ -0.81
ARHGEF28-209ENST00000510131 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF28-209ENST00000510131 POLMQ9NP87 494 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF28-209ENST00000510131 LILRA1O75019 489 aa9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 ADD1P35611 737 aaKnown RBP9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 CCDC155Q8N6L0 562 aa9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 GPR161Q8N6U8 529 aaKnown RBP9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 SLC35F4A4IF30 521 aa9.96□□□□□ -0.82
ARHGEF28-209ENST00000510131 ADH1AP07327 375 aa9.96□□□□□ -0.82
ARHGEF28-209ENST00000510131 ZBBXA8MT70 800 aa9.95□□□□□ -0.82
ARHGEF28-209ENST00000510131 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
ARHGEF28-209ENST00000510131 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF28-209ENST00000510131 PTGIRP43119 386 aa9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 KDF1Q8NAX2 398 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 NANOS1Q8WY41 292 aaKnown RBP9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 BRPF1P55201 1214 aaPredicted RBP9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 KRT76Q01546 638 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 CYLDQ9NQC7 956 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
ARHGEF28-209ENST00000510131 FBXO45P0C2W1 286 aa9.92□□□□□ -0.82
ARHGEF28-209ENST00000510131 ITGA6P23229 1130 aa9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 TRIM52Q96A61 297 aa9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 COL25A1Q9BXS0 654 aaPredicted RBP9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 VWA5B2Q8N398 1253 aa9.9□□□□□ -0.82
ARHGEF28-209ENST00000510131 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 CDC14CA4D256 554 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 SV2AQ7L0J3 742 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 BANK1Q8NDB2 785 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 LYSMD3Q7Z3D4 306 aa9.87□□□□□ -0.83
ARHGEF28-209ENST00000510131 ATP5J2-PTCD1G3V325 749 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 NR1H3Q13133 447 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 RNFT1Q5M7Z0 435 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 CCDC125Q86Z20 511 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 RNF144AP50876 292 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 MCCD1P59942 119 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 RNF20Q5VTR2 975 aa9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
ARHGEF28-209ENST00000510131 MTMR14Q8NCE2 650 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms