RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 MEIOBQ8N635 442 aa10.2□□□□□ -0.78
ARHGEF28-209ENST00000510131 EMILIN1Q9Y6C2 1016 aa10.2□□□□□ -0.78
ARHGEF28-209ENST00000510131 ERBB4Q15303 1308 aa10.19□□□□□ -0.78
ARHGEF28-209ENST00000510131 AP1G2O75843 785 aa10.19□□□□□ -0.78
ARHGEF28-209ENST00000510131 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
ARHGEF28-209ENST00000510131 MAN1A2O60476 641 aa10.18□□□□□ -0.78
ARHGEF28-209ENST00000510131 ZC3H4Q9UPT8 1303 aaKnown RBP10.17□□□□□ -0.78
ARHGEF28-209ENST00000510131 ZBTB33Q86T24 672 aa10.17□□□□□ -0.78
ARHGEF28-209ENST00000510131 SLC10A4Q96EP9 437 aa10.16□□□□□ -0.78
ARHGEF28-209ENST00000510131 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF28-209ENST00000510131 KCTD15Q96SI1 283 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF28-209ENST00000510131 TSEN34Q9BSV6 310 aaKnown RBP10.15□□□□□ -0.78
ARHGEF28-209ENST00000510131 SOS2Q07890 1332 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 PTK2Q05397 1052 aa10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 PGPEP1Q9NXJ5 209 aa10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 CDV3Q9UKY7 258 aaKnown RBP10.14□□□□□ -0.79
ARHGEF28-209ENST00000510131 EPS8L1Q8TE68 723 aa10.13□□□□□ -0.79
ARHGEF28-209ENST00000510131 OCSTAMPQ9BR26 566 aa10.13□□□□□ -0.79
ARHGEF28-209ENST00000510131 CBLBQ13191 982 aa10.12□□□□□ -0.79
ARHGEF28-209ENST00000510131 DNMT3LQ9UJW3 386 aa10.12□□□□□ -0.79
ARHGEF28-209ENST00000510131 GPSM3Q9Y4H4 160 aa10.12□□□□□ -0.79
ARHGEF28-209ENST00000510131 USP17L8P0C7I0 530 aa10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 ZSCAN1Q8NBB4 408 aa10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 ADAM32Q8TC27 787 aa10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 HMX1Q9NP08 348 aaPredicted RBP10.11□□□□□ -0.79
ARHGEF28-209ENST00000510131 PPFIA3O75145 1194 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 VSIG8P0DPA2 414 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 LORP23490 312 aaPredicted RBP10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 RFC5P40937 340 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 DHX9Q08211 1270 aaKnown RBP10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 Q6ZVU0 165 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 PNMA1Q8ND90 353 aa10.1□□□□□ -0.79
ARHGEF28-209ENST00000510131 SLC24A1O60721 1099 aa10.09□□□□□ -0.79
ARHGEF28-209ENST00000510131 INTS6LQ5JSJ4 861 aaKnown RBP10.09□□□□□ -0.79
ARHGEF28-209ENST00000510131 FAM181BA6NEQ2 426 aa10.08□□□□□ -0.8
ARHGEF28-209ENST00000510131 TTLL8A6PVC2 850 aa10.08□□□□□ -0.8
ARHGEF28-209ENST00000510131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.8
ARHGEF28-209ENST00000510131 PCMTD1Q96MG8 357 aaPredicted RBP10.07□□□□□ -0.8
ARHGEF28-209ENST00000510131 FIGNL2A6NMB9 653 aa10.06□□□□□ -0.8
ARHGEF28-209ENST00000510131 SPINT1O43278 529 aa10.06□□□□□ -0.8
ARHGEF28-209ENST00000510131 GOPCQ9HD26 462 aa10.06□□□□□ -0.8
ARHGEF28-209ENST00000510131 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
ARHGEF28-209ENST00000510131 NEUROD2Q15784 382 aa10.04□□□□□ -0.8
ARHGEF28-209ENST00000510131 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
ARHGEF28-209ENST00000510131 DZIP3Q86Y13 1208 aaKnown RBP10.04□□□□□ -0.8
ARHGEF28-209ENST00000510131 RAB15P59190 212 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 PTSQ03393 145 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 TMEM259Q4ZIN3 620 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 TMPRSS4Q9NRS4 437 aa10.03□□□□□ -0.8
ARHGEF28-209ENST00000510131 RELBQ01201 579 aa10.02□□□□□ -0.81
ARHGEF28-209ENST00000510131 IL27Q8NEV9 243 aa10.02□□□□□ -0.81
ARHGEF28-209ENST00000510131 TRIM34Q9BYJ4 488 aa10.02□□□□□ -0.81
ARHGEF28-209ENST00000510131 CTSOP43234 321 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-209ENST00000510131 ZNF784Q8NCA9 323 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-209ENST00000510131 INSM2Q96T92 566 aaPredicted RBP10□□□□□ -0.81
ARHGEF28-209ENST00000510131 ESPNB1AK53 854 aa9.99□□□□□ -0.81
ARHGEF28-209ENST00000510131 ERVH48-1M5A8F1 160 aa9.99□□□□□ -0.81
ARHGEF28-209ENST00000510131 ZNF395Q9H8N7 513 aaPredicted RBP9.99□□□□□ -0.81
ARHGEF28-209ENST00000510131 POLMQ9NP87 494 aaPredicted RBP9.98□□□□□ -0.81
ARHGEF28-209ENST00000510131 LILRA1O75019 489 aa9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 ADD1P35611 737 aaKnown RBP9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 CCDC155Q8N6L0 562 aa9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 GPR161Q8N6U8 529 aaKnown RBP9.97□□□□□ -0.81
ARHGEF28-209ENST00000510131 SLC35F4A4IF30 521 aa9.96□□□□□ -0.82
ARHGEF28-209ENST00000510131 ADH1AP07327 375 aa9.96□□□□□ -0.82
ARHGEF28-209ENST00000510131 ZBBXA8MT70 800 aa9.95□□□□□ -0.82
ARHGEF28-209ENST00000510131 SEPT12Q8IYM1 358 aa9.95□□□□□ -0.82
ARHGEF28-209ENST00000510131 GJD4Q96KN9 370 aaPredicted RBP9.95□□□□□ -0.82
ARHGEF28-209ENST00000510131 PTGIRP43119 386 aa9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 KDF1Q8NAX2 398 aaPredicted RBP9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 RNF217Q8TC41 542 aa9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 NANOS1Q8WY41 292 aaKnown RBP9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 PCDHB9Q9Y5E1 797 aa9.94□□□□□ -0.82
ARHGEF28-209ENST00000510131 BRPF1P55201 1214 aaPredicted RBP9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 KRT76Q01546 638 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 CNTNAP3BQ96NU0 1288 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 CNTNAP3Q9BZ76 1288 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 CYLDQ9NQC7 956 aa9.93□□□□□ -0.82
ARHGEF28-209ENST00000510131 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
ARHGEF28-209ENST00000510131 FBXO45P0C2W1 286 aa9.92□□□□□ -0.82
ARHGEF28-209ENST00000510131 ITGA6P23229 1130 aa9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 FOXD4L5Q5VV16 416 aaPredicted RBP9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 TRIM52Q96A61 297 aa9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 COL25A1Q9BXS0 654 aaPredicted RBP9.91□□□□□ -0.82
ARHGEF28-209ENST00000510131 VWA5B2Q8N398 1253 aa9.9□□□□□ -0.82
ARHGEF28-209ENST00000510131 SENP3-EIF4A1A0A087X0R7 540 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 CDC14CA4D256 554 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 SV2AQ7L0J3 742 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 BANK1Q8NDB2 785 aa9.88□□□□□ -0.83
ARHGEF28-209ENST00000510131 LYSMD3Q7Z3D4 306 aa9.87□□□□□ -0.83
ARHGEF28-209ENST00000510131 ATP5J2-PTCD1G3V325 749 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 NR1H3Q13133 447 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 RNFT1Q5M7Z0 435 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 CCDC125Q86Z20 511 aa9.86□□□□□ -0.83
ARHGEF28-209ENST00000510131 RNF144AP50876 292 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 MCCD1P59942 119 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 RNF20Q5VTR2 975 aa9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 PRICKLE2Q7Z3G6 844 aa9.85□□□□□ -0.83
ARHGEF28-209ENST00000510131 CC2D2BQ6DHV5 1058 aa9.84□□□□□ -0.83
ARHGEF28-209ENST00000510131 MTMR14Q8NCE2 650 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms