RNA–Protein interactions for RNA: ENST00000510131.1

ARHGEF28-209, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5

Gene ARHGEF28, Length 280 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-209ENST00000510131 AEBP2Q6ZN18 517 aaPredicted RBP29.29■■■□□ 2.28
ARHGEF28-209ENST00000510131 CHIC1Q5VXU3 224 aa27.98■■■□□ 2.07
ARHGEF28-209ENST00000510131 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.58
ARHGEF28-209ENST00000510131 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
ARHGEF28-209ENST00000510131 FOXD1Q16676 465 aa23.24■■□□□ 1.31
ARHGEF28-209ENST00000510131 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
ARHGEF28-209ENST00000510131 PPP6R1Q9UPN7 881 aa21.87■■□□□ 1.09
ARHGEF28-209ENST00000510131 ADRA2BP18089 450 aa21.82■■□□□ 1.08
ARHGEF28-209ENST00000510131 PIAS4Q8N2W9 510 aaPredicted RBP21.76■■□□□ 1.07
ARHGEF28-209ENST00000510131 MSH5O43196 834 aa21.67■■□□□ 1.06
ARHGEF28-209ENST00000510131 POTEDQ86YR6 584 aa20.87■□□□□ 0.93
ARHGEF28-209ENST00000510131 MAPK8IP2Q13387 824 aaPredicted RBP19.99■□□□□ 0.79
ARHGEF28-209ENST00000510131 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
ARHGEF28-209ENST00000510131 DMRT2Q9Y5R5 561 aa19.81■□□□□ 0.76
ARHGEF28-209ENST00000510131 PPP4R3CPQ6ZMV5 832 aa19.7■□□□□ 0.74
ARHGEF28-209ENST00000510131 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
ARHGEF28-209ENST00000510131 HOXD11P31277 338 aaPredicted RBP19.15■□□□□ 0.66
ARHGEF28-209ENST00000510131 RNF216Q9NWF9 866 aaPredicted RBP19.06■□□□□ 0.64
ARHGEF28-209ENST00000510131 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
ARHGEF28-209ENST00000510131 NCBP3Q53F19 620 aaKnown RBP19■□□□□ 0.63
ARHGEF28-209ENST00000510131 NPM3O75607 178 aaKnown RBP18.71■□□□□ 0.59
ARHGEF28-209ENST00000510131 KCNA4P22459 653 aa18.51■□□□□ 0.55
ARHGEF28-209ENST00000510131 CACNB1Q02641 598 aaPredicted RBP18.51■□□□□ 0.55
ARHGEF28-209ENST00000510131 RNF39Q9H2S5 420 aa18.51■□□□□ 0.55
ARHGEF28-209ENST00000510131 DNAJC5BQ9UF47 199 aa18.44■□□□□ 0.54
ARHGEF28-209ENST00000510131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.27■□□□□ 0.52
ARHGEF28-209ENST00000510131 C1QBPQ07021 282 aaKnown RBP18.25■□□□□ 0.51
ARHGEF28-209ENST00000510131 U3KPZ7 1027 aaPredicted RBP17.89■□□□□ 0.45
ARHGEF28-209ENST00000510131 SLC4A2P04920 1241 aa17.83■□□□□ 0.44
ARHGEF28-209ENST00000510131 SPINK5Q9NQ38 1064 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF28-209ENST00000510131 CAPN15O75808 1086 aa17.56■□□□□ 0.4
ARHGEF28-209ENST00000510131 SLC4A1APQ9BWU0 796 aaKnown RBP17.52■□□□□ 0.4
ARHGEF28-209ENST00000510131 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
ARHGEF28-209ENST00000510131 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
ARHGEF28-209ENST00000510131 APLP2Q06481 763 aa17.41■□□□□ 0.38
ARHGEF28-209ENST00000510131 DSG3P32926 999 aa17.4■□□□□ 0.38
ARHGEF28-209ENST00000510131 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
ARHGEF28-209ENST00000510131 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
ARHGEF28-209ENST00000510131 MYCNP04198 464 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF28-209ENST00000510131 ZNF219Q9P2Y4 722 aaPredicted RBP17.27■□□□□ 0.36
ARHGEF28-209ENST00000510131 FOXD4L1Q9NU39 408 aa17.21■□□□□ 0.35
ARHGEF28-209ENST00000510131 ABCB7O75027 752 aa17.17■□□□□ 0.34
ARHGEF28-209ENST00000510131 ZBTB22O15209 634 aa17.01■□□□□ 0.31
ARHGEF28-209ENST00000510131 ATF5Q9Y2D1 282 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF28-209ENST00000510131 POLA2Q14181 598 aa16.89■□□□□ 0.29
ARHGEF28-209ENST00000510131 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
ARHGEF28-209ENST00000510131 RBM42Q9BTD8 480 aaKnown RBP16.59■□□□□ 0.25
ARHGEF28-209ENST00000510131 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
ARHGEF28-209ENST00000510131 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
ARHGEF28-209ENST00000510131 POTEHQ6S545 545 aa16.39■□□□□ 0.21
ARHGEF28-209ENST00000510131 OSCARQ8IYS5 282 aa16.33■□□□□ 0.2
ARHGEF28-209ENST00000510131 EHMT2Q96KQ7 1210 aa16.28■□□□□ 0.2
ARHGEF28-209ENST00000510131 AKT1S1Q96B36 256 aa16.26■□□□□ 0.19
ARHGEF28-209ENST00000510131 FBLN2P98095 1184 aa16.23■□□□□ 0.19
ARHGEF28-209ENST00000510131 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
ARHGEF28-209ENST00000510131 MKRN4PQ13434 485 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF28-209ENST00000510131 REM2Q8IYK8 340 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF28-209ENST00000510131 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
ARHGEF28-209ENST00000510131 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
ARHGEF28-209ENST00000510131 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
ARHGEF28-209ENST00000510131 PITPNM1O00562 1244 aa15.93■□□□□ 0.14
ARHGEF28-209ENST00000510131 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF28-209ENST00000510131 SSUH2Q9Y2M2 353 aa15.85■□□□□ 0.13
ARHGEF28-209ENST00000510131 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
ARHGEF28-209ENST00000510131 FXR2P51116 673 aaKnown RBP eCLIP15.76■□□□□ 0.11
ARHGEF28-209ENST00000510131 SPDYE1Q8NFV5 336 aaPredicted RBP15.74■□□□□ 0.11
ARHGEF28-209ENST00000510131 CLEC11AQ9Y240 323 aa15.72■□□□□ 0.11
ARHGEF28-209ENST00000510131 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
ARHGEF28-209ENST00000510131 PRKAR2AP13861 404 aaKnown RBP15.53■□□□□ 0.08
ARHGEF28-209ENST00000510131 HAX1O00165 279 aa15.51■□□□□ 0.07
ARHGEF28-209ENST00000510131 PRR29P0C7W0 189 aa15.48■□□□□ 0.07
ARHGEF28-209ENST00000510131 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
ARHGEF28-209ENST00000510131 SP7Q8TDD2 431 aaPredicted RBP15.45■□□□□ 0.06
ARHGEF28-209ENST00000510131 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
ARHGEF28-209ENST00000510131 EVX2Q03828 476 aa15.32■□□□□ 0.04
ARHGEF28-209ENST00000510131 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
ARHGEF28-209ENST00000510131 C19orf67A6NJJ6 358 aa15.24■□□□□ 0.03
ARHGEF28-209ENST00000510131 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
ARHGEF28-209ENST00000510131 CREBZFQ9NS37 354 aa15.13■□□□□ 0.01
ARHGEF28-209ENST00000510131 PROM2Q8N271 834 aa15.09■□□□□ 0.01
ARHGEF28-209ENST00000510131 CD44P16070 742 aaKnown RBP15.04■□□□□ -0
ARHGEF28-209ENST00000510131 GABBR2O75899 941 aa14.98□□□□□ -0.01
ARHGEF28-209ENST00000510131 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF28-209ENST00000510131 FKBP8Q14318 412 aa14.87□□□□□ -0.03
ARHGEF28-209ENST00000510131 ZRANB1Q9UGI0 708 aa14.87□□□□□ -0.03
ARHGEF28-209ENST00000510131 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
ARHGEF28-209ENST00000510131 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
ARHGEF28-209ENST00000510131 CLCN6P51797 869 aa14.79□□□□□ -0.04
ARHGEF28-209ENST00000510131 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
ARHGEF28-209ENST00000510131 MIER1Q8N108 512 aa14.74□□□□□ -0.05
ARHGEF28-209ENST00000510131 PLEKHG5O94827 1062 aa14.71□□□□□ -0.05
ARHGEF28-209ENST00000510131 PHF12Q96QT6 1004 aa14.67□□□□□ -0.06
ARHGEF28-209ENST00000510131 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
ARHGEF28-209ENST00000510131 PLCD3Q8N3E9 789 aa14.64□□□□□ -0.07
ARHGEF28-209ENST00000510131 GALR2O43603 387 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF28-209ENST00000510131 DCBLD2Q96PD2 775 aa14.63□□□□□ -0.07
ARHGEF28-209ENST00000510131 TSPYL2Q9H2G4 693 aaPredicted RBP14.61□□□□□ -0.07
ARHGEF28-209ENST00000510131 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
ARHGEF28-209ENST00000510131 CCDC61Q9Y6R9 512 aa14.51□□□□□ -0.09
ARHGEF28-209ENST00000510131 LHX8Q68G74 356 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms