RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TOM1L2Q6ZVM7 507 aa22.9■■□□□ 1.26
RAB40C-202ENST00000509637 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.26
RAB40C-202ENST00000509637 ANO8Q9HCE9 1232 aaPredicted RBP22.89■■□□□ 1.25
RAB40C-202ENST00000509637 NFAT5O94916 1531 aa22.88■■□□□ 1.25
RAB40C-202ENST00000509637 PDGFDQ9GZP0 370 aaPredicted RBP22.88■■□□□ 1.25
RAB40C-202ENST00000509637 DDB1Q16531 1140 aa22.87■■□□□ 1.25
RAB40C-202ENST00000509637 ZNF692Q9BU19 519 aaPredicted RBP22.87■■□□□ 1.25
RAB40C-202ENST00000509637 OVOS2A0A0G2JMS6 1433 aa22.87■■□□□ 1.25
RAB40C-202ENST00000509637 OVOS2A0A0J9YW53 1432 aa22.87■■□□□ 1.25
RAB40C-202ENST00000509637 OVOS2Q6IE36 1432 aa22.87■■□□□ 1.25
RAB40C-202ENST00000509637 WNK3Q9BYP7 1800 aa22.87■■□□□ 1.25
RAB40C-202ENST00000509637 CD163L1Q9NR16 1453 aa22.86■■□□□ 1.25
RAB40C-202ENST00000509637 PLSCR1O15162 318 aa22.84■■□□□ 1.25
RAB40C-202ENST00000509637 NBPF14Q5TI25 921 aa22.83■■□□□ 1.25
RAB40C-202ENST00000509637 CARD10Q9BWT7 1032 aa22.83■■□□□ 1.25
RAB40C-202ENST00000509637 BCL11BQ9C0K0 894 aaPredicted RBP22.83■■□□□ 1.25
RAB40C-202ENST00000509637 TTC21AQ8NDW8 1320 aa22.82■■□□□ 1.24
RAB40C-202ENST00000509637 KTN1Q86UP2 1357 aaKnown RBP22.82■■□□□ 1.24
RAB40C-202ENST00000509637 NME9Q86XW9 330 aa22.82■■□□□ 1.24
RAB40C-202ENST00000509637 SBNO2Q9Y2G9 1366 aa22.81■■□□□ 1.24
RAB40C-202ENST00000509637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.81■■□□□ 1.24
RAB40C-202ENST00000509637 KCNH5Q8NCM2 988 aa22.81■■□□□ 1.24
RAB40C-202ENST00000509637 MON2Q7Z3U7 1717 aa22.81■■□□□ 1.24
RAB40C-202ENST00000509637 KCNQ2O43526 872 aa22.8■■□□□ 1.24
RAB40C-202ENST00000509637 BCL9O00512 1426 aa22.8■■□□□ 1.24
RAB40C-202ENST00000509637 USP31Q70CQ4 1352 aa22.79■■□□□ 1.24
RAB40C-202ENST00000509637 SLC12A5Q9H2X9 1139 aa22.79■■□□□ 1.24
RAB40C-202ENST00000509637 RGPD3A6NKT7 1758 aaPredicted RBP22.78■■□□□ 1.24
RAB40C-202ENST00000509637 RGPD4Q7Z3J3 1758 aa22.78■■□□□ 1.24
RAB40C-202ENST00000509637 CASZ1Q86V15 1759 aa22.78■■□□□ 1.24
RAB40C-202ENST00000509637 C11orf95C9JLR9 678 aaPredicted RBP22.77■■□□□ 1.24
RAB40C-202ENST00000509637 CSB-PGBD3P0DP91 1061 aa22.77■■□□□ 1.24
RAB40C-202ENST00000509637 SPON1Q9HCB6 807 aa22.76■■□□□ 1.23
RAB40C-202ENST00000509637 CDCA7Q9BWT1 371 aaPredicted RBP22.75■■□□□ 1.23
RAB40C-202ENST00000509637 USP54Q70EL1 1684 aa22.74■■□□□ 1.23
RAB40C-202ENST00000509637 TXNRD1Q16881 649 aa22.74■■□□□ 1.23
RAB40C-202ENST00000509637 CARD11Q9BXL7 1154 aa22.74■■□□□ 1.23
RAB40C-202ENST00000509637 EXOC5O00471 708 aa22.73■■□□□ 1.23
RAB40C-202ENST00000509637 ERBB3P21860 1342 aa22.72■■□□□ 1.23
RAB40C-202ENST00000509637 PTGER2P43116 358 aa22.71■■□□□ 1.23
RAB40C-202ENST00000509637 CCDC7Q96M83 1385 aa22.71■■□□□ 1.23
RAB40C-202ENST00000509637 ZBTB7AO95365 584 aa22.7■■□□□ 1.22
RAB40C-202ENST00000509637 FBLN1P23142 703 aa22.7■■□□□ 1.22
RAB40C-202ENST00000509637 TMC1Q8TDI8 760 aa22.7■■□□□ 1.22
RAB40C-202ENST00000509637 ACSBG1Q96GR2 724 aa22.7■■□□□ 1.22
RAB40C-202ENST00000509637 TNS2Q63HR2 1409 aa22.7■■□□□ 1.22
RAB40C-202ENST00000509637 ABCC6O95255 1503 aa22.69■■□□□ 1.22
RAB40C-202ENST00000509637 TESK2Q96S53 571 aa22.69■■□□□ 1.22
RAB40C-202ENST00000509637 LTN1O94822 1766 aa22.68■■□□□ 1.22
RAB40C-202ENST00000509637 A0A1W2PP64 1363 aa22.68■■□□□ 1.22
RAB40C-202ENST00000509637 NLRP2Q9NX02 1062 aa22.68■■□□□ 1.22
RAB40C-202ENST00000509637 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
RAB40C-202ENST00000509637 ATF5Q9Y2D1 282 aaPredicted RBP22.67■■□□□ 1.22
RAB40C-202ENST00000509637 SLC15A2Q16348 729 aa22.66■■□□□ 1.22
RAB40C-202ENST00000509637 PPP1R1BQ9UD71 204 aaPredicted RBP22.66■■□□□ 1.22
RAB40C-202ENST00000509637 EDC4Q6P2E9 1401 aaKnown RBP22.65■■□□□ 1.22
RAB40C-202ENST00000509637 NHSQ6T4R5 1651 aa22.65■■□□□ 1.22
RAB40C-202ENST00000509637 IL2RBP14784 551 aa22.64■■□□□ 1.21
RAB40C-202ENST00000509637 SGIP1Q9BQI5 828 aa22.64■■□□□ 1.21
RAB40C-202ENST00000509637 NINLQ9Y2I6 1382 aa22.63■■□□□ 1.21
RAB40C-202ENST00000509637 MYOM1P52179 1685 aa22.63■■□□□ 1.21
RAB40C-202ENST00000509637 YY1P25490 414 aa22.63■■□□□ 1.21
RAB40C-202ENST00000509637 LRRC4BQ9NT99 713 aa22.63■■□□□ 1.21
RAB40C-202ENST00000509637 HDGFL2Q7Z4V5 671 aaPredicted RBP22.62■■□□□ 1.21
RAB40C-202ENST00000509637 ST20-MTHFSA0A0A6YYL1 179 aa22.61■■□□□ 1.21
RAB40C-202ENST00000509637 PAPPAQ13219 1627 aa22.6■■□□□ 1.21
RAB40C-202ENST00000509637 BTAF1O14981 1849 aa22.6■■□□□ 1.21
RAB40C-202ENST00000509637 ZNF827Q17R98 1081 aa22.6■■□□□ 1.21
RAB40C-202ENST00000509637 IP6K1Q92551 441 aa22.6■■□□□ 1.21
RAB40C-202ENST00000509637 PUS7Q96PZ0 661 aaKnown RBP22.6■■□□□ 1.21
RAB40C-202ENST00000509637 STK32BQ9NY57 414 aa22.6■■□□□ 1.21
RAB40C-202ENST00000509637 LTV1Q96GA3 475 aaPredicted RBP22.59■■□□□ 1.21
RAB40C-202ENST00000509637 KAT6BQ8WYB5 2073 aa22.58■■□□□ 1.21
RAB40C-202ENST00000509637 TERF2IPQ9NYB0 399 aa22.57■■□□□ 1.2
RAB40C-202ENST00000509637 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
RAB40C-202ENST00000509637 RGPD2P0DJD1 1756 aa22.56■■□□□ 1.2
RAB40C-202ENST00000509637 TONSLQ96HA7 1378 aa22.56■■□□□ 1.2
RAB40C-202ENST00000509637 KCNQ4P56696 695 aa22.55■■□□□ 1.2
RAB40C-202ENST00000509637 SYT17Q9BSW7 474 aa22.55■■□□□ 1.2
RAB40C-202ENST00000509637 FHDC1Q9C0D6 1143 aaPredicted RBP22.55■■□□□ 1.2
RAB40C-202ENST00000509637 DDX54Q8TDD1 881 aaKnown RBP22.54■■□□□ 1.2
RAB40C-202ENST00000509637 FAM208AQ9UK61 1670 aaKnown RBP22.54■■□□□ 1.2
RAB40C-202ENST00000509637 HOXC9P31274 260 aa22.53■■□□□ 1.2
RAB40C-202ENST00000509637 MTFR1LQ9H019 292 aa22.53■■□□□ 1.2
RAB40C-202ENST00000509637 AKT1S1Q96B36 256 aa22.52■■□□□ 1.2
RAB40C-202ENST00000509637 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
RAB40C-202ENST00000509637 NSD2O96028 1365 aa22.5■■□□□ 1.19
RAB40C-202ENST00000509637 MEGF6O75095 1541 aa22.49■■□□□ 1.19
RAB40C-202ENST00000509637 FYB1O15117 783 aa22.49■■□□□ 1.19
RAB40C-202ENST00000509637 RRS1Q15050 365 aaKnown RBP22.49■■□□□ 1.19
RAB40C-202ENST00000509637 PRIM1P49642 420 aaKnown RBP22.48■■□□□ 1.19
RAB40C-202ENST00000509637 NBPF6Q5VWK0 638 aa22.48■■□□□ 1.19
RAB40C-202ENST00000509637 COG3Q96JB2 828 aa22.48■■□□□ 1.19
RAB40C-202ENST00000509637 NBPF4Q96M43 638 aa22.48■■□□□ 1.19
RAB40C-202ENST00000509637 GGNBP2Q9H3C7 697 aa22.47■■□□□ 1.19
RAB40C-202ENST00000509637 AMPHP49418 695 aa22.45■■□□□ 1.18
RAB40C-202ENST00000509637 USHBP1Q8N6Y0 703 aa22.45■■□□□ 1.18
RAB40C-202ENST00000509637 ARXQ96QS3 562 aa22.45■■□□□ 1.18
RAB40C-202ENST00000509637 PNPLA7Q6ZV29 1317 aa22.45■■□□□ 1.18
RAB40C-202ENST00000509637 ANKRD36BQ8N2N9 1353 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms