RNA–Protein interactions for RNA: ENST00000509511.5

FGFR4-211, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 1 (best)

Gene FGFR4, Length 1,341 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-211ENST00000509511 PANK3Q9H999 370 aa27.1■■□□□ 1.93
FGFR4-211ENST00000509511 SOCS7O14512 581 aa27.09■■□□□ 1.93
FGFR4-211ENST00000509511 SPATA31A5Q5VU36 1347 aa27.08■■□□□ 1.93
FGFR4-211ENST00000509511 SPATA31A7Q8IWB4 1347 aa27.08■■□□□ 1.93
FGFR4-211ENST00000509511 ANKRD26Q9UPS8 1709 aa27.08■■□□□ 1.93
FGFR4-211ENST00000509511 ZEB1P37275 1124 aaPredicted RBP27.08■■□□□ 1.93
FGFR4-211ENST00000509511 WASHC2AQ641Q2 1341 aa27.06■■□□□ 1.92
FGFR4-211ENST00000509511 CRB1P82279 1406 aa27.05■■□□□ 1.92
FGFR4-211ENST00000509511 SPATA31A1Q5TZJ5 1347 aa27.05■■□□□ 1.92
FGFR4-211ENST00000509511 NSD2O96028 1365 aa27.05■■□□□ 1.92
FGFR4-211ENST00000509511 BLMP54132 1417 aaPredicted RBP27.03■■□□□ 1.92
FGFR4-211ENST00000509511 RGPD5Q99666 1765 aa27.03■■□□□ 1.92
FGFR4-211ENST00000509511 LARP1Q6PKG0 1096 aaKnown RBP27.03■■□□□ 1.92
FGFR4-211ENST00000509511 THSD7AQ9UPZ6 1657 aa27.03■■□□□ 1.92
FGFR4-211ENST00000509511 RTL1A6NKG5 1358 aa27.03■■□□□ 1.92
FGFR4-211ENST00000509511 A0A0G2JS52 829 aa27.02■■□□□ 1.92
FGFR4-211ENST00000509511 MYT1Q01538 1121 aa27.02■■□□□ 1.92
FGFR4-211ENST00000509511 AXIN2Q9Y2T1 843 aa27.02■■□□□ 1.92
FGFR4-211ENST00000509511 WDR17Q8IZU2 1322 aa27.01■■□□□ 1.91
FGFR4-211ENST00000509511 FAM98CQ17RN3 349 aaKnown RBP27■■□□□ 1.91
FGFR4-211ENST00000509511 KNSTRNQ9Y448 316 aa27■■□□□ 1.91
FGFR4-211ENST00000509511 MAP3K19Q56UN5 1328 aa27■■□□□ 1.91
FGFR4-211ENST00000509511 USP35Q9P2H5 1018 aa26.99■■□□□ 1.91
FGFR4-211ENST00000509511 FAM208AQ9UK61 1670 aaKnown RBP26.98■■□□□ 1.91
FGFR4-211ENST00000509511 ERBB3P21860 1342 aa26.98■■□□□ 1.91
FGFR4-211ENST00000509511 CSB-PGBD3P0DP91 1061 aa26.98■■□□□ 1.91
FGFR4-211ENST00000509511 TOM1L2Q6ZVM7 507 aa26.98■■□□□ 1.91
FGFR4-211ENST00000509511 SEPT12Q8IYM1 358 aa26.97■■□□□ 1.91
FGFR4-211ENST00000509511 TCP11L2Q8N4U5 519 aa26.97■■□□□ 1.91
FGFR4-211ENST00000509511 ONECUT3O60422 494 aaPredicted RBP26.96■■□□□ 1.91
FGFR4-211ENST00000509511 AMPHP49418 695 aa26.96■■□□□ 1.91
FGFR4-211ENST00000509511 WNK3Q9BYP7 1800 aa26.96■■□□□ 1.91
FGFR4-211ENST00000509511 KIF24Q5T7B8 1368 aa26.96■■□□□ 1.91
FGFR4-211ENST00000509511 RRS1Q15050 365 aaKnown RBP26.95■■□□□ 1.91
FGFR4-211ENST00000509511 IP6K1Q92551 441 aa26.95■■□□□ 1.91
FGFR4-211ENST00000509511 THRAP3Q9Y2W1 955 aaKnown RBP26.95■■□□□ 1.91
FGFR4-211ENST00000509511 BRWD3Q6RI45 1802 aa26.95■■□□□ 1.9
FGFR4-211ENST00000509511 BARGINQ6ZT62 677 aa26.94■■□□□ 1.9
FGFR4-211ENST00000509511 FLT4P35916 1363 aa26.94■■□□□ 1.9
FGFR4-211ENST00000509511 HOXC9P31274 260 aa26.93■■□□□ 1.9
FGFR4-211ENST00000509511 PEAK1Q9H792 1746 aa26.93■■□□□ 1.9
FGFR4-211ENST00000509511 FBLN1P23142 703 aa26.92■■□□□ 1.9
FGFR4-211ENST00000509511 ANKRD24Q8TF21 1146 aa26.92■■□□□ 1.9
FGFR4-211ENST00000509511 SMG6Q86US8 1419 aaKnown RBP26.92■■□□□ 1.9
FGFR4-211ENST00000509511 PARP4Q9UKK3 1724 aaKnown RBP26.91■■□□□ 1.9
FGFR4-211ENST00000509511 EP400Q96L91 3159 aa26.91■■□□□ 1.9
FGFR4-211ENST00000509511 CARD10Q9BWT7 1032 aa26.9■■□□□ 1.9
FGFR4-211ENST00000509511 LRRC37A3O60309 1634 aa26.89■■□□□ 1.89
FGFR4-211ENST00000509511 AMER1Q5JTC6 1135 aaPredicted RBP26.88■■□□□ 1.89
FGFR4-211ENST00000509511 KRT27Q7Z3Y8 459 aa26.88■■□□□ 1.89
FGFR4-211ENST00000509511 NLRP2Q9NX02 1062 aa26.88■■□□□ 1.89
FGFR4-211ENST00000509511 TNNT2P45379 298 aaPredicted RBP26.87■■□□□ 1.89
FGFR4-211ENST00000509511 EMILIN1Q9Y6C2 1016 aa26.87■■□□□ 1.89
FGFR4-211ENST00000509511 INSRP06213 1382 aa26.86■■□□□ 1.89
FGFR4-211ENST00000509511 MORC1Q86VD1 984 aa26.86■■□□□ 1.89
FGFR4-211ENST00000509511 LTV1Q96GA3 475 aaPredicted RBP26.86■■□□□ 1.89
FGFR4-211ENST00000509511 PER1O15534 1290 aaPredicted RBP26.85■■□□□ 1.89
FGFR4-211ENST00000509511 CDCA7Q9BWT1 371 aaPredicted RBP26.85■■□□□ 1.89
FGFR4-211ENST00000509511 NPC1L1Q9UHC9 1359 aa26.84■■□□□ 1.89
FGFR4-211ENST00000509511 PPM1GO15355 546 aaPredicted RBP26.84■■□□□ 1.89
FGFR4-211ENST00000509511 MAP2P11137 1827 aaKnown RBP26.84■■□□□ 1.89
FGFR4-211ENST00000509511 DISP2A7MBM2 1401 aa26.84■■□□□ 1.89
FGFR4-211ENST00000509511 HSP90AB2PQ58FF8 381 aa26.8■■□□□ 1.88
FGFR4-211ENST00000509511 POLKQ9UBT6 870 aa26.8■■□□□ 1.88
FGFR4-211ENST00000509511 TNS2Q63HR2 1409 aa26.79■■□□□ 1.88
FGFR4-211ENST00000509511 PDE3BQ13370 1112 aa26.79■■□□□ 1.88
FGFR4-211ENST00000509511 CC2D1BQ5T0F9 858 aaKnown RBP26.79■■□□□ 1.88
FGFR4-211ENST00000509511 UPF1Q92900 1129 aaKnown RBP eCLIP26.79■■□□□ 1.888e-11■■■□□ 18.7
FGFR4-211ENST00000509511 RGPD2P0DJD1 1756 aa26.77■■□□□ 1.88
FGFR4-211ENST00000509511 DDB1Q16531 1140 aa26.77■■□□□ 1.88
FGFR4-211ENST00000509511 IL2RBP14784 551 aa26.75■■□□□ 1.87
FGFR4-211ENST00000509511 OVOS2A0A0G2JMS6 1433 aa26.73■■□□□ 1.87
FGFR4-211ENST00000509511 RGPD1P0DJD0 1748 aa26.71■■□□□ 1.87
FGFR4-211ENST00000509511 FAM182BQ5T319 152 aa26.7■■□□□ 1.87
FGFR4-211ENST00000509511 NBPF6Q5VWK0 638 aa26.7■■□□□ 1.87
FGFR4-211ENST00000509511 NBPF4Q96M43 638 aa26.7■■□□□ 1.87
FGFR4-211ENST00000509511 MEGF6O75095 1541 aa26.69■■□□□ 1.86
FGFR4-211ENST00000509511 CNGB1Q14028 1251 aaPredicted RBP26.69■■□□□ 1.86
FGFR4-211ENST00000509511 FAM196AQ6ZSG2 479 aa26.69■■□□□ 1.86
FGFR4-211ENST00000509511 CCDC125Q86Z20 511 aa26.69■■□□□ 1.86
FGFR4-211ENST00000509511 NCAPD2Q15021 1401 aa26.68■■□□□ 1.86
FGFR4-211ENST00000509511 EXOC5O00471 708 aa26.67■■□□□ 1.86
FGFR4-211ENST00000509511 USHBP1Q8N6Y0 703 aa26.67■■□□□ 1.86
FGFR4-211ENST00000509511 SF3B2Q13435 895 aaKnown RBP26.65■■□□□ 1.86
FGFR4-211ENST00000509511 EIF4A2Q14240 407 aaKnown RBP26.65■■□□□ 1.86
FGFR4-211ENST00000509511 RAPGEF4Q8WZA2 1011 aa26.65■■□□□ 1.86
FGFR4-211ENST00000509511 TNS1Q9HBL0 1735 aaKnown RBP26.65■■□□□ 1.86
FGFR4-211ENST00000509511 BCL9O00512 1426 aa26.63■■□□□ 1.85
FGFR4-211ENST00000509511 MTHFSP49914 203 aa26.63■■□□□ 1.85
FGFR4-211ENST00000509511 MARCH10Q8NA82 808 aaPredicted RBP26.62■■□□□ 1.85
FGFR4-211ENST00000509511 SHANK3Q9BYB0 1731 aa26.61■■□□□ 1.85
FGFR4-211ENST00000509511 EYA1Q99502 592 aa26.61■■□□□ 1.85
FGFR4-211ENST00000509511 IGSF1Q8N6C5 1336 aa26.6■■□□□ 1.85
FGFR4-211ENST00000509511 TATP17735 454 aaPredicted RBP26.6■■□□□ 1.85
FGFR4-211ENST00000509511 DDX10Q13206 875 aaKnown RBP26.6■■□□□ 1.85
FGFR4-211ENST00000509511 PKD1L3Q7Z443 1732 aa26.59■■□□□ 1.85
FGFR4-211ENST00000509511 PLEKHG2Q9H7P9 1386 aa26.57■■□□□ 1.84
FGFR4-211ENST00000509511 TRIM37O94972 964 aa26.57■■□□□ 1.84
FGFR4-211ENST00000509511 ZCRB1Q8TBF4 217 aaKnown RBP26.57■■□□□ 1.84
FGFR4-211ENST00000509511 COL3A1P02461 1466 aaPredicted RBP26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms