RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 CCDC116Q8IYX3 515 aa11.09□□□□□ -0.63
LINC01088-205ENST00000509088 VSIG8P0DPA2 414 aa11.08□□□□□ -0.64
LINC01088-205ENST00000509088 EPS8L1Q8TE68 723 aa11.08□□□□□ -0.64
LINC01088-205ENST00000509088 SOS2Q07890 1332 aaPredicted RBP11.08□□□□□ -0.64
LINC01088-205ENST00000509088 HMX1Q9NP08 348 aaPredicted RBP11.07□□□□□ -0.64
LINC01088-205ENST00000509088 DNMT3LQ9UJW3 386 aa11.07□□□□□ -0.64
LINC01088-205ENST00000509088 BMP2P12643 396 aa11.06□□□□□ -0.64
LINC01088-205ENST00000509088 ARHGAP9Q9BRR9 750 aa11.06□□□□□ -0.64
LINC01088-205ENST00000509088 EMILIN1Q9Y6C2 1016 aa11.06□□□□□ -0.64
LINC01088-205ENST00000509088 PPP1R26Q5T8A7 1209 aaPredicted RBP11.05□□□□□ -0.64
LINC01088-205ENST00000509088 ZC3H4Q9UPT8 1303 aaKnown RBP11.05□□□□□ -0.64
LINC01088-205ENST00000509088 MAN1A2O60476 641 aa11.04□□□□□ -0.64
LINC01088-205ENST00000509088 Q6ZVU0 165 aa11.04□□□□□ -0.64
LINC01088-205ENST00000509088 BCANQ96GW7 911 aa11.04□□□□□ -0.64
LINC01088-205ENST00000509088 AP1G2O75843 785 aa11.03□□□□□ -0.64
LINC01088-205ENST00000509088 CBLBQ13191 982 aa11.03□□□□□ -0.64
LINC01088-205ENST00000509088 KCTD15Q96SI1 283 aaPredicted RBP11.02□□□□□ -0.65
LINC01088-205ENST00000509088 PPFIA3O75145 1194 aa11.01□□□□□ -0.65
LINC01088-205ENST00000509088 USP17L8P0C7I0 530 aa11.01□□□□□ -0.65
LINC01088-205ENST00000509088 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
LINC01088-205ENST00000509088 ZSCAN1Q8NBB4 408 aa11.01□□□□□ -0.65
LINC01088-205ENST00000509088 SLC10A4Q96EP9 437 aa11.01□□□□□ -0.65
LINC01088-205ENST00000509088 TSEN34Q9BSV6 310 aaKnown RBP11.01□□□□□ -0.65
LINC01088-205ENST00000509088 UPP2O95045 317 aa11□□□□□ -0.65
LINC01088-205ENST00000509088 ADAM32Q8TC27 787 aa11□□□□□ -0.65
LINC01088-205ENST00000509088 RFC5P40937 340 aa10.99□□□□□ -0.65
LINC01088-205ENST00000509088 GPSM3Q9Y4H4 160 aa10.99□□□□□ -0.65
LINC01088-205ENST00000509088 ZBTB33Q86T24 672 aa10.98□□□□□ -0.65
LINC01088-205ENST00000509088 CDV3Q9UKY7 258 aaKnown RBP10.98□□□□□ -0.65
LINC01088-205ENST00000509088 SPINT1O43278 529 aa10.97□□□□□ -0.65
LINC01088-205ENST00000509088 PTK2Q05397 1052 aa10.97□□□□□ -0.65
LINC01088-205ENST00000509088 TRIM34Q9BYJ4 488 aa10.97□□□□□ -0.65
LINC01088-205ENST00000509088 PGPEP1Q9NXJ5 209 aa10.97□□□□□ -0.65
LINC01088-205ENST00000509088 TTLL8A6PVC2 850 aa10.96□□□□□ -0.65
LINC01088-205ENST00000509088 AGBL1Q96MI9 1066 aa10.94□□□□□ -0.66
LINC01088-205ENST00000509088 GOPCQ9HD26 462 aa10.94□□□□□ -0.66
LINC01088-205ENST00000509088 PTSQ03393 145 aa10.93□□□□□ -0.66
LINC01088-205ENST00000509088 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.93□□□□□ -0.66
LINC01088-205ENST00000509088 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
LINC01088-205ENST00000509088 TMPRSS4Q9NRS4 437 aa10.93□□□□□ -0.66
LINC01088-205ENST00000509088 ATP1B4Q9UN42 357 aaPredicted RBP10.93□□□□□ -0.66
LINC01088-205ENST00000509088 FIGNL2A6NMB9 653 aa10.92□□□□□ -0.66
LINC01088-205ENST00000509088 KRT76Q01546 638 aa10.92□□□□□ -0.66
LINC01088-205ENST00000509088 DHX9Q08211 1270 aaKnown RBP10.92□□□□□ -0.66
LINC01088-205ENST00000509088 KDF1Q8NAX2 398 aaPredicted RBP10.92□□□□□ -0.66
LINC01088-205ENST00000509088 ESPNB1AK53 854 aa10.91□□□□□ -0.66
LINC01088-205ENST00000509088 LILRA1O75019 489 aa10.91□□□□□ -0.66
LINC01088-205ENST00000509088 CTSOP43234 321 aaPredicted RBP10.91□□□□□ -0.66
LINC01088-205ENST00000509088 ADD1P35611 737 aaKnown RBP10.9□□□□□ -0.66
LINC01088-205ENST00000509088 ZNF784Q8NCA9 323 aaPredicted RBP10.9□□□□□ -0.66
LINC01088-205ENST00000509088 GJD4Q96KN9 370 aaPredicted RBP10.9□□□□□ -0.66
LINC01088-205ENST00000509088 ERVH48-1M5A8F1 160 aa10.89□□□□□ -0.67
LINC01088-205ENST00000509088 RELBQ01201 579 aa10.89□□□□□ -0.67
LINC01088-205ENST00000509088 NBPF20Q3BBV1 942 aa10.89□□□□□ -0.67
LINC01088-205ENST00000509088 INSM2Q96T92 566 aaPredicted RBP10.89□□□□□ -0.67
LINC01088-205ENST00000509088 FAM181BA6NEQ2 426 aa10.88□□□□□ -0.67
LINC01088-205ENST00000509088 SLC35F4A4IF30 521 aa10.87□□□□□ -0.67
LINC01088-205ENST00000509088 RAB15P59190 212 aa10.86□□□□□ -0.67
LINC01088-205ENST00000509088 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
LINC01088-205ENST00000509088 DZIP3Q86Y13 1208 aaKnown RBP10.86□□□□□ -0.67
LINC01088-205ENST00000509088 CCDC155Q8N6L0 562 aa10.86□□□□□ -0.67
LINC01088-205ENST00000509088 RNF217Q8TC41 542 aa10.86□□□□□ -0.67
LINC01088-205ENST00000509088 ADH1AP07327 375 aa10.85□□□□□ -0.67
LINC01088-205ENST00000509088 NANOS1Q8WY41 292 aaKnown RBP10.85□□□□□ -0.67
LINC01088-205ENST00000509088 PCMTD1Q96MG8 357 aaPredicted RBP10.85□□□□□ -0.67
LINC01088-205ENST00000509088 ZNF395Q9H8N7 513 aaPredicted RBP10.85□□□□□ -0.67
LINC01088-205ENST00000509088 SENP3-EIF4A1A0A087X0R7 540 aa10.84□□□□□ -0.67
LINC01088-205ENST00000509088 GPR37L1O60883 481 aa10.84□□□□□ -0.67
LINC01088-205ENST00000509088 NEUROD2Q15784 382 aa10.84□□□□□ -0.67
LINC01088-205ENST00000509088 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
LINC01088-205ENST00000509088 PNMA1Q8ND90 353 aa10.84□□□□□ -0.67
LINC01088-205ENST00000509088 IL27Q8NEV9 243 aa10.84□□□□□ -0.67
LINC01088-205ENST00000509088 FBXO45P0C2W1 286 aa10.82□□□□□ -0.68
LINC01088-205ENST00000509088 BRPF1P55201 1214 aaPredicted RBP10.82□□□□□ -0.68
LINC01088-205ENST00000509088 PTGIRP43119 386 aa10.81□□□□□ -0.68
LINC01088-205ENST00000509088 RNFT1Q5M7Z0 435 aa10.81□□□□□ -0.68
LINC01088-205ENST00000509088 POLMQ9NP87 494 aaPredicted RBP10.81□□□□□ -0.68
LINC01088-205ENST00000509088 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
LINC01088-205ENST00000509088 ITGA6P23229 1130 aa10.8□□□□□ -0.68
LINC01088-205ENST00000509088 CNTNAP3BQ96NU0 1288 aa10.8□□□□□ -0.68
LINC01088-205ENST00000509088 COL25A1Q9BXS0 654 aaPredicted RBP10.8□□□□□ -0.68
LINC01088-205ENST00000509088 CNTNAP3Q9BZ76 1288 aa10.8□□□□□ -0.68
LINC01088-205ENST00000509088 GIGYF1O75420 1035 aaPredicted RBP10.79□□□□□ -0.68
LINC01088-205ENST00000509088 SEPT12Q8IYM1 358 aa10.79□□□□□ -0.68
LINC01088-205ENST00000509088 CYLDQ9NQC7 956 aa10.79□□□□□ -0.68
LINC01088-205ENST00000509088 GSK3AP49840 483 aa10.78□□□□□ -0.68
LINC01088-205ENST00000509088 VWA5B2Q8N398 1253 aa10.76□□□□□ -0.69
LINC01088-205ENST00000509088 PCDHB9Q9Y5E1 797 aa10.76□□□□□ -0.69
LINC01088-205ENST00000509088 MTMR14Q8NCE2 650 aa10.75□□□□□ -0.69
LINC01088-205ENST00000509088 CUEDC1Q9NWM3 386 aaPredicted RBP10.75□□□□□ -0.69
LINC01088-205ENST00000509088 ZNF385CQ66K41 422 aaPredicted RBP10.73□□□□□ -0.69
LINC01088-205ENST00000509088 SOCS7O14512 581 aa10.72□□□□□ -0.69
LINC01088-205ENST00000509088 RNF144AP50876 292 aaPredicted RBP10.72□□□□□ -0.69
LINC01088-205ENST00000509088 ERVK-9P63128 1117 aa10.72□□□□□ -0.69
LINC01088-205ENST00000509088 CDC14CA4D256 554 aa10.71□□□□□ -0.69
LINC01088-205ENST00000509088 SLURP2P0DP57 97 aa10.71□□□□□ -0.69
LINC01088-205ENST00000509088 NR1H3Q13133 447 aa10.71□□□□□ -0.69
LINC01088-205ENST00000509088 LYSMD3Q7Z3D4 306 aa10.71□□□□□ -0.69
LINC01088-205ENST00000509088 WHAMMQ8TF30 809 aa10.71□□□□□ -0.69
LINC01088-205ENST00000509088 ATP5J2-PTCD1G3V325 749 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms