RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 PIP4K2BP78356 416 aa13.9□□□□□ -0.18
RFC1-211ENST00000509084 CCDC184Q52MB2 194 aa13.9□□□□□ -0.18
RFC1-211ENST00000509084 FLT4P35916 1363 aa13.9□□□□□ -0.18
RFC1-211ENST00000509084 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.19
RFC1-211ENST00000509084 ABCC6O95255 1503 aa13.9□□□□□ -0.19
RFC1-211ENST00000509084 COL3A1P02461 1466 aaPredicted RBP13.89□□□□□ -0.19
RFC1-211ENST00000509084 POLA2Q14181 598 aa13.89□□□□□ -0.19
RFC1-211ENST00000509084 WDR43Q15061 677 aaKnown RBP eCLIP13.89□□□□□ -0.19
RFC1-211ENST00000509084 LTN1O94822 1766 aa13.88□□□□□ -0.19
RFC1-211ENST00000509084 ABCA3Q99758 1704 aa13.88□□□□□ -0.19
RFC1-211ENST00000509084 GCP02774 474 aa13.88□□□□□ -0.19
RFC1-211ENST00000509084 RRS1Q15050 365 aaKnown RBP13.88□□□□□ -0.19
RFC1-211ENST00000509084 PNISRQ8TF01 805 aaKnown RBP13.88□□□□□ -0.19
RFC1-211ENST00000509084 NUDCQ9Y266 331 aa13.88□□□□□ -0.19
RFC1-211ENST00000509084 EMILIN1Q9Y6C2 1016 aa13.88□□□□□ -0.19
RFC1-211ENST00000509084 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
RFC1-211ENST00000509084 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
RFC1-211ENST00000509084 PPM1GO15355 546 aaPredicted RBP13.87□□□□□ -0.19
RFC1-211ENST00000509084 SOX12O15370 315 aa13.87□□□□□ -0.19
RFC1-211ENST00000509084 AMPHP49418 695 aa13.87□□□□□ -0.19
RFC1-211ENST00000509084 PEAK1Q9H792 1746 aa13.87□□□□□ -0.19
RFC1-211ENST00000509084 CPDO75976 1380 aa13.86□□□□□ -0.19
RFC1-211ENST00000509084 DIAPH1O60610 1272 aaKnown RBP13.86□□□□□ -0.19
RFC1-211ENST00000509084 BLMP54132 1417 aaPredicted RBP13.85□□□□□ -0.19
RFC1-211ENST00000509084 HAP1P54257 671 aaPredicted RBP13.85□□□□□ -0.19
RFC1-211ENST00000509084 ARHGEF25Q86VW2 580 aa13.85□□□□□ -0.19
RFC1-211ENST00000509084 FAM9BQ8IZU0 186 aa13.85□□□□□ -0.19
RFC1-211ENST00000509084 FBLN1P23142 703 aa13.84□□□□□ -0.19
RFC1-211ENST00000509084 HOXC9P31274 260 aa13.84□□□□□ -0.19
RFC1-211ENST00000509084 IP6K1Q92551 441 aa13.84□□□□□ -0.19
RFC1-211ENST00000509084 JCADQ9P266 1359 aa13.83□□□□□ -0.2
RFC1-211ENST00000509084 PNNQ9H307 717 aaKnown RBP13.82□□□□□ -0.2
RFC1-211ENST00000509084 FAM208AQ9UK61 1670 aaKnown RBP13.8□□□□□ -0.2
RFC1-211ENST00000509084 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
RFC1-211ENST00000509084 IL13P35225 146 aa13.8□□□□□ -0.2
RFC1-211ENST00000509084 HSP90AB2PQ58FF8 381 aa13.8□□□□□ -0.2
RFC1-211ENST00000509084 CABLES1Q8TDN4 633 aa13.8□□□□□ -0.2
RFC1-211ENST00000509084 ADAMTS8Q9UP79 889 aa13.8□□□□□ -0.2
RFC1-211ENST00000509084 RGPD1P0DJD0 1748 aa13.8□□□□□ -0.2
RFC1-211ENST00000509084 KIAA0232Q92628 1395 aa13.8□□□□□ -0.2
RFC1-211ENST00000509084 COL18A1P39060 1754 aa13.79□□□□□ -0.2
RFC1-211ENST00000509084 ZBTB7CA1YPR0 619 aa13.79□□□□□ -0.2
RFC1-211ENST00000509084 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
RFC1-211ENST00000509084 U2AF1L5P0DN76 240 aaPredicted RBP13.79□□□□□ -0.2
RFC1-211ENST00000509084 ZC3H6P61129 1189 aaKnown RBP13.79□□□□□ -0.2
RFC1-211ENST00000509084 U2AF1Q01081 240 aaKnown RBP eCLIP13.79□□□□□ -0.2
RFC1-211ENST00000509084 EIF4A2Q14240 407 aaKnown RBP13.79□□□□□ -0.2
RFC1-211ENST00000509084 PRDM11Q9NQV5 511 aa13.79□□□□□ -0.2
RFC1-211ENST00000509084 LMO7Q8WWI1 1683 aa13.78□□□□□ -0.2
RFC1-211ENST00000509084 COL14A1Q05707 1796 aaKnown RBP13.78□□□□□ -0.2
RFC1-211ENST00000509084 FCHSD2O94868 740 aa13.77□□□□□ -0.21
RFC1-211ENST00000509084 NEFMP07197 916 aa13.77□□□□□ -0.21
RFC1-211ENST00000509084 SPATA31A6Q5VVP1 1343 aa13.77□□□□□ -0.21
RFC1-211ENST00000509084 CAMTA1Q9Y6Y1 1673 aa13.76□□□□□ -0.21
RFC1-211ENST00000509084 IGSF1Q8N6C5 1336 aa13.76□□□□□ -0.21
RFC1-211ENST00000509084 NGEFQ8N5V2 710 aa13.76□□□□□ -0.21
RFC1-211ENST00000509084 YTHDC1Q96MU7 727 aaKnown RBP13.76□□□□□ -0.21
RFC1-211ENST00000509084 ERBB3P21860 1342 aa13.75□□□□□ -0.21
RFC1-211ENST00000509084 HNRNPUQ00839 825 aaKnown RBP eCLIP13.75□□□□□ -0.21
RFC1-211ENST00000509084 RUNDC1Q96C34 613 aa13.75□□□□□ -0.21
RFC1-211ENST00000509084 NCAPD2Q15021 1401 aa13.74□□□□□ -0.21
RFC1-211ENST00000509084 KDRP35968 1356 aa13.74□□□□□ -0.21
RFC1-211ENST00000509084 MAPK8IP3Q9UPT6 1336 aa13.74□□□□□ -0.21
RFC1-211ENST00000509084 ANKRD24Q8TF21 1146 aa13.74□□□□□ -0.21
RFC1-211ENST00000509084 ZBTB12Q9Y330 459 aaPredicted RBP13.74□□□□□ -0.21
RFC1-211ENST00000509084 RGPD5Q99666 1765 aa13.73□□□□□ -0.21
RFC1-211ENST00000509084 PLEKHG2Q9H7P9 1386 aa13.73□□□□□ -0.21
RFC1-211ENST00000509084 HSPA1LP34931 641 aa13.73□□□□□ -0.21
RFC1-211ENST00000509084 CHRNA2Q15822 529 aa13.73□□□□□ -0.21
RFC1-211ENST00000509084 RSPH6AQ9H0K4 717 aa13.73□□□□□ -0.21
RFC1-211ENST00000509084 COL5A2P05997 1499 aaPredicted RBP13.73□□□□□ -0.21
RFC1-211ENST00000509084 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
RFC1-211ENST00000509084 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
RFC1-211ENST00000509084 LTV1Q96GA3 475 aaPredicted RBP13.72□□□□□ -0.21
RFC1-211ENST00000509084 EYA1Q99502 592 aa13.72□□□□□ -0.21
RFC1-211ENST00000509084 AXIN2Q9Y2T1 843 aa13.72□□□□□ -0.21
RFC1-211ENST00000509084 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
RFC1-211ENST00000509084 NWD2Q9ULI1 1742 aa13.71□□□□□ -0.21
RFC1-211ENST00000509084 HMOX1P09601 288 aa13.71□□□□□ -0.21
RFC1-211ENST00000509084 PRKAR2BP31323 418 aa13.71□□□□□ -0.21
RFC1-211ENST00000509084 CCDC146Q8IYE0 955 aa13.71□□□□□ -0.21
RFC1-211ENST00000509084 WDR17Q8IZU2 1322 aa13.7□□□□□ -0.22
RFC1-211ENST00000509084 CSB-PGBD3P0DP91 1061 aa13.7□□□□□ -0.22
RFC1-211ENST00000509084 PLEKHF1Q96S99 279 aa13.7□□□□□ -0.22
RFC1-211ENST00000509084 FAM83GA6ND36 823 aa13.69□□□□□ -0.22
RFC1-211ENST00000509084 NUTM2BA6NNL0 878 aaPredicted RBP13.69□□□□□ -0.22
RFC1-211ENST00000509084 NUTM2EB1AL46 878 aaPredicted RBP13.69□□□□□ -0.22
RFC1-211ENST00000509084 NUTM2AQ8IVF1 878 aaPredicted RBP13.69□□□□□ -0.22
RFC1-211ENST00000509084 RGPD2P0DJD1 1756 aa13.68□□□□□ -0.22
RFC1-211ENST00000509084 APAF1O14727 1248 aa13.68□□□□□ -0.22
RFC1-211ENST00000509084 ADAMTS2O95450 1211 aa13.68□□□□□ -0.22
RFC1-211ENST00000509084 EVA1CP58658 441 aa13.68□□□□□ -0.22
RFC1-211ENST00000509084 NBPF6Q5VWK0 638 aa13.68□□□□□ -0.22
RFC1-211ENST00000509084 TCP11L2Q8N4U5 519 aa13.68□□□□□ -0.22
RFC1-211ENST00000509084 NBPF4Q96M43 638 aa13.68□□□□□ -0.22
RFC1-211ENST00000509084 NRAPQ86VF7 1730 aa13.67□□□□□ -0.22
RFC1-211ENST00000509084 CRB1P82279 1406 aa13.67□□□□□ -0.22
RFC1-211ENST00000509084 SOCS7O14512 581 aa13.67□□□□□ -0.22
RFC1-211ENST00000509084 CENPBP07199 599 aaPredicted RBP13.67□□□□□ -0.22
RFC1-211ENST00000509084 AEBP1Q8IUX7 1158 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms