RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 RTL1A6NKG5 1358 aa8.43□□□□□ -1.06
RACK1-220ENST00000508963 CDK12Q9NYV4 1490 aaPredicted RBP8.43□□□□□ -1.06
RACK1-220ENST00000508963 NBPF6Q5VWK0 638 aa8.42□□□□□ -1.06
RACK1-220ENST00000508963 NBPF4Q96M43 638 aa8.42□□□□□ -1.06
RACK1-220ENST00000508963 CFAP53Q96M91 514 aa8.42□□□□□ -1.06
RACK1-220ENST00000508963 EYA1Q99502 592 aa8.42□□□□□ -1.06
RACK1-220ENST00000508963 PRDM11Q9NQV5 511 aa8.42□□□□□ -1.06
RACK1-220ENST00000508963 PHRF1Q9P1Y6 1649 aaKnown RBP8.42□□□□□ -1.06
RACK1-220ENST00000508963 SHPRHQ149N8 1683 aa8.41□□□□□ -1.06
RACK1-220ENST00000508963 CAMTA1Q9Y6Y1 1673 aa8.41□□□□□ -1.06
RACK1-220ENST00000508963 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
RACK1-220ENST00000508963 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
RACK1-220ENST00000508963 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
RACK1-220ENST00000508963 FNBP4Q8N3X1 1017 aaPredicted RBP8.41□□□□□ -1.06
RACK1-220ENST00000508963 ANKRD24Q8TF21 1146 aa8.41□□□□□ -1.06
RACK1-220ENST00000508963 PLEKHF1Q96S99 279 aa8.41□□□□□ -1.06
RACK1-220ENST00000508963 BLMP54132 1417 aaPredicted RBP8.4□□□□□ -1.06
RACK1-220ENST00000508963 ERBB3P21860 1342 aa8.4□□□□□ -1.06
RACK1-220ENST00000508963 IGSF1Q8N6C5 1336 aa8.4□□□□□ -1.06
RACK1-220ENST00000508963 FCHSD2O94868 740 aa8.4□□□□□ -1.06
RACK1-220ENST00000508963 ADAMTS2O95450 1211 aa8.4□□□□□ -1.06
RACK1-220ENST00000508963 HAP1P54257 671 aaPredicted RBP8.4□□□□□ -1.06
RACK1-220ENST00000508963 FAM9BQ8IZU0 186 aa8.4□□□□□ -1.06
RACK1-220ENST00000508963 BTG4Q9NY30 223 aa8.4□□□□□ -1.06
RACK1-220ENST00000508963 NUDCQ9Y266 331 aa8.4□□□□□ -1.06
RACK1-220ENST00000508963 LRP6O75581 1613 aa8.4□□□□□ -1.07
RACK1-220ENST00000508963 ZBTB7CA1YPR0 619 aa8.39□□□□□ -1.07
RACK1-220ENST00000508963 LTV1Q96GA3 475 aaPredicted RBP8.39□□□□□ -1.07
RACK1-220ENST00000508963 RSPH6AQ9H0K4 717 aa8.39□□□□□ -1.07
RACK1-220ENST00000508963 ABCA3Q99758 1704 aa8.39□□□□□ -1.07
RACK1-220ENST00000508963 LMO7Q8WWI1 1683 aa8.39□□□□□ -1.07
RACK1-220ENST00000508963 SLIT2O94813 1529 aa8.39□□□□□ -1.07
RACK1-220ENST00000508963 ABCC6O95255 1503 aa8.39□□□□□ -1.07
RACK1-220ENST00000508963 NCAPD2Q15021 1401 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 KDRP35968 1356 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 U2SURPO15042 1029 aaKnown RBP8.38□□□□□ -1.07
RACK1-220ENST00000508963 U2AF1L5P0DN76 240 aaPredicted RBP8.38□□□□□ -1.07
RACK1-220ENST00000508963 U2AF1Q01081 240 aaKnown RBP eCLIP8.38□□□□□ -1.07
RACK1-220ENST00000508963 SULT6B1Q6IMI4 303 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 LARP1Q6PKG0 1096 aaKnown RBP8.38□□□□□ -1.07
RACK1-220ENST00000508963 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 PHACTR3Q96KR7 559 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 COL5A2P05997 1499 aaPredicted RBP8.38□□□□□ -1.07
RACK1-220ENST00000508963 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 LTN1O94822 1766 aa8.38□□□□□ -1.07
RACK1-220ENST00000508963 HMOX1P09601 288 aa8.37□□□□□ -1.07
RACK1-220ENST00000508963 WDR43Q15061 677 aaKnown RBP eCLIP8.37□□□□□ -1.07
RACK1-220ENST00000508963 UNC5CLQ8IV45 518 aa8.37□□□□□ -1.07
RACK1-220ENST00000508963 NGLY1Q96IV0 654 aa8.37□□□□□ -1.07
RACK1-220ENST00000508963 CARD10Q9BWT7 1032 aa8.37□□□□□ -1.07
RACK1-220ENST00000508963 EVA1CP58658 441 aa8.36□□□□□ -1.07
RACK1-220ENST00000508963 NCBP3Q53F19 620 aaKnown RBP8.36□□□□□ -1.07
RACK1-220ENST00000508963 USHBP1Q8N6Y0 703 aa8.36□□□□□ -1.07
RACK1-220ENST00000508963 RUNDC1Q96C34 613 aa8.36□□□□□ -1.07
RACK1-220ENST00000508963 C8orf37Q96NL8 207 aa8.36□□□□□ -1.07
RACK1-220ENST00000508963 RGPD1P0DJD0 1748 aa8.36□□□□□ -1.07
RACK1-220ENST00000508963 COL14A1Q05707 1796 aaKnown RBP8.35□□□□□ -1.07
RACK1-220ENST00000508963 RGPD5Q99666 1765 aa8.35□□□□□ -1.07
RACK1-220ENST00000508963 PRKAR2BP31323 418 aa8.35□□□□□ -1.07
RACK1-220ENST00000508963 VPS72Q15906 364 aa8.35□□□□□ -1.07
RACK1-220ENST00000508963 ILDR1Q86SU0 546 aaPredicted RBP8.35□□□□□ -1.07
RACK1-220ENST00000508963 PHF23Q9BUL5 403 aaPredicted RBP8.35□□□□□ -1.07
RACK1-220ENST00000508963 STRN4Q9NRL3 753 aa8.35□□□□□ -1.07
RACK1-220ENST00000508963 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
RACK1-220ENST00000508963 SPATA31A1Q5TZJ5 1347 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 SPATA31A5Q5VU36 1347 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 SPATA31A7Q8IWB4 1347 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 APAF1O14727 1248 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 ONECUT3O60422 494 aaPredicted RBP8.34□□□□□ -1.07
RACK1-220ENST00000508963 TOM1L2Q6ZVM7 507 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 CCDC146Q8IYE0 955 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 TCP11L2Q8N4U5 519 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 PNNQ9H307 717 aaKnown RBP8.34□□□□□ -1.07
RACK1-220ENST00000508963 RGS17Q9UGC6 210 aaPredicted RBP8.34□□□□□ -1.07
RACK1-220ENST00000508963 USP21Q9UK80 565 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 CRB1P82279 1406 aa8.34□□□□□ -1.07
RACK1-220ENST00000508963 AFF2P51816 1311 aa8.33□□□□□ -1.08
RACK1-220ENST00000508963 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
RACK1-220ENST00000508963 TMPOP42166 694 aaKnown RBP8.33□□□□□ -1.08
RACK1-220ENST00000508963 MTHFSDQ2M296 383 aaKnown RBP8.33□□□□□ -1.08
RACK1-220ENST00000508963 BARGINQ6ZT62 677 aa8.33□□□□□ -1.08
RACK1-220ENST00000508963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.33□□□□□ -1.08
RACK1-220ENST00000508963 THRAP3Q9Y2W1 955 aaKnown RBP8.33□□□□□ -1.08
RACK1-220ENST00000508963 NFE2L2Q16236 605 aa8.32□□□□□ -1.08
RACK1-220ENST00000508963 CCDC27Q2M243 656 aa8.32□□□□□ -1.08
RACK1-220ENST00000508963 QTRT2Q9H974 415 aaKnown RBP8.32□□□□□ -1.08
RACK1-220ENST00000508963 TRIM35Q9UPQ4 493 aa8.32□□□□□ -1.08
RACK1-220ENST00000508963 ZNF521Q96K83 1311 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 FAM208AQ9UK61 1670 aaKnown RBP8.31□□□□□ -1.08
RACK1-220ENST00000508963 DISP2A7MBM2 1401 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 RGPD2P0DJD1 1756 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 SENP3-EIF4A1A0A087X0R7 540 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 IL2RBP14784 551 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 AMOTQ4VCS5 1084 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 MEX3CQ5U5Q3 659 aaKnown RBP8.31□□□□□ -1.08
RACK1-220ENST00000508963 NGEFQ8N5V2 710 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 GJD4Q96KN9 370 aaPredicted RBP8.31□□□□□ -1.08
RACK1-220ENST00000508963 PLEKHG2Q9H7P9 1386 aa8.31□□□□□ -1.08
RACK1-220ENST00000508963 NWD2Q9ULI1 1742 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms