RNA–Protein interactions for RNA: ENST00000508948.5

ARRDC3-205, Transcript of arrestin domain containing 3, humanhuman

TSL 4

Gene ARRDC3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC3-205ENST00000508948 RGPD5Q99666 1765 aa11.66□□□□□ -0.54
ARRDC3-205ENST00000508948 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.54
ARRDC3-205ENST00000508948 LTN1O94822 1766 aa11.64□□□□□ -0.55
ARRDC3-205ENST00000508948 CGNL1Q0VF96 1302 aa11.64□□□□□ -0.55
ARRDC3-205ENST00000508948 MAP3K19Q56UN5 1328 aa11.64□□□□□ -0.55
ARRDC3-205ENST00000508948 SPATA31A5Q5VU36 1347 aa11.64□□□□□ -0.55
ARRDC3-205ENST00000508948 SPATA31A7Q8IWB4 1347 aa11.64□□□□□ -0.55
ARRDC3-205ENST00000508948 RGS12O14924 1447 aa11.64□□□□□ -0.55
ARRDC3-205ENST00000508948 PER1O15534 1290 aaPredicted RBP11.64□□□□□ -0.55
ARRDC3-205ENST00000508948 COL5A2P05997 1499 aaPredicted RBP11.63□□□□□ -0.55
ARRDC3-205ENST00000508948 TNNT2P45379 298 aaPredicted RBP11.63□□□□□ -0.55
ARRDC3-205ENST00000508948 CNGB1Q14028 1251 aaPredicted RBP11.63□□□□□ -0.55
ARRDC3-205ENST00000508948 AMER1Q5JTC6 1135 aaPredicted RBP11.63□□□□□ -0.55
ARRDC3-205ENST00000508948 USP35Q9P2H5 1018 aa11.63□□□□□ -0.55
ARRDC3-205ENST00000508948 KNSTRNQ9Y448 316 aa11.63□□□□□ -0.55
ARRDC3-205ENST00000508948 SPATA31A1Q5TZJ5 1347 aa11.62□□□□□ -0.55
ARRDC3-205ENST00000508948 FAM98CQ17RN3 349 aaKnown RBP11.62□□□□□ -0.55
ARRDC3-205ENST00000508948 IP6K1Q92551 441 aa11.62□□□□□ -0.55
ARRDC3-205ENST00000508948 EMILIN1Q9Y6C2 1016 aa11.62□□□□□ -0.55
ARRDC3-205ENST00000508948 HOXC9P31274 260 aa11.61□□□□□ -0.55
ARRDC3-205ENST00000508948 AMPHP49418 695 aa11.61□□□□□ -0.55
ARRDC3-205ENST00000508948 SEPT12Q8IYM1 358 aa11.61□□□□□ -0.55
ARRDC3-205ENST00000508948 LTV1Q96GA3 475 aaPredicted RBP11.61□□□□□ -0.55
ARRDC3-205ENST00000508948 PEAK1Q9H792 1746 aa11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 ANKRD26Q9UPS8 1709 aa11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 CDK12Q9NYV4 1490 aaPredicted RBP11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 ONECUT3O60422 494 aaPredicted RBP11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 CSB-PGBD3P0DP91 1061 aa11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 CC2D1BQ5T0F9 858 aaKnown RBP11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 TOM1L2Q6ZVM7 507 aa11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 MORC1Q86VD1 984 aa11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 ANKRD24Q8TF21 1146 aa11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
ARRDC3-205ENST00000508948 HSP90AB2PQ58FF8 381 aa11.59□□□□□ -0.55
ARRDC3-205ENST00000508948 POLKQ9UBT6 870 aa11.59□□□□□ -0.55
ARRDC3-205ENST00000508948 CRB1P82279 1406 aa11.59□□□□□ -0.55
ARRDC3-205ENST00000508948 A0A0G2JS52 829 aa11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 PPM1GO15355 546 aaPredicted RBP11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 MYT1Q01538 1121 aa11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 TCP11L2Q8N4U5 519 aa11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 ABCC6O95255 1503 aa11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 MAP2P11137 1827 aaKnown RBP11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 BRWD3Q6RI45 1802 aa11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 ERBB3P21860 1342 aa11.58□□□□□ -0.56
ARRDC3-205ENST00000508948 NSD2O96028 1365 aa11.57□□□□□ -0.56
ARRDC3-205ENST00000508948 SOCS7O14512 581 aa11.57□□□□□ -0.56
ARRDC3-205ENST00000508948 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
ARRDC3-205ENST00000508948 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
ARRDC3-205ENST00000508948 NLRP2Q9NX02 1062 aa11.57□□□□□ -0.56
ARRDC3-205ENST00000508948 BLMP54132 1417 aaPredicted RBP11.56□□□□□ -0.56
ARRDC3-205ENST00000508948 FAM182BQ5T319 152 aa11.56□□□□□ -0.56
ARRDC3-205ENST00000508948 BARGINQ6ZT62 677 aa11.56□□□□□ -0.56
ARRDC3-205ENST00000508948 RGPD2P0DJD1 1756 aa11.56□□□□□ -0.56
ARRDC3-205ENST00000508948 THSD7AQ9UPZ6 1657 aa11.55□□□□□ -0.56
ARRDC3-205ENST00000508948 RTL1A6NKG5 1358 aa11.55□□□□□ -0.56
ARRDC3-205ENST00000508948 USHBP1Q8N6Y0 703 aa11.55□□□□□ -0.56
ARRDC3-205ENST00000508948 THRAP3Q9Y2W1 955 aaKnown RBP11.55□□□□□ -0.56
ARRDC3-205ENST00000508948 INSRP06213 1382 aa11.54□□□□□ -0.56
ARRDC3-205ENST00000508948 FLT4P35916 1363 aa11.54□□□□□ -0.56
ARRDC3-205ENST00000508948 NBPF6Q5VWK0 638 aa11.54□□□□□ -0.56
ARRDC3-205ENST00000508948 KRT27Q7Z3Y8 459 aa11.54□□□□□ -0.56
ARRDC3-205ENST00000508948 NBPF4Q96M43 638 aa11.54□□□□□ -0.56
ARRDC3-205ENST00000508948 NPC1L1Q9UHC9 1359 aa11.53□□□□□ -0.56
ARRDC3-205ENST00000508948 DISP2A7MBM2 1401 aa11.52□□□□□ -0.56
ARRDC3-205ENST00000508948 WNK3Q9BYP7 1800 aa11.52□□□□□ -0.57
ARRDC3-205ENST00000508948 EIF4A2Q14240 407 aaKnown RBP11.52□□□□□ -0.57
ARRDC3-205ENST00000508948 UPF1Q92900 1129 aaKnown RBP eCLIP11.52□□□□□ -0.57
ARRDC3-205ENST00000508948 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
ARRDC3-205ENST00000508948 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
ARRDC3-205ENST00000508948 ZNF316A6NFI3 1004 aaPredicted RBP11.51□□□□□ -0.57
ARRDC3-205ENST00000508948 MTHFSP49914 203 aa11.51□□□□□ -0.57
ARRDC3-205ENST00000508948 FAM208AQ9UK61 1670 aaKnown RBP11.51□□□□□ -0.57
ARRDC3-205ENST00000508948 PARP4Q9UKK3 1724 aaKnown RBP11.5□□□□□ -0.57
ARRDC3-205ENST00000508948 IL2RBP14784 551 aa11.5□□□□□ -0.57
ARRDC3-205ENST00000508948 EYA1Q99502 592 aa11.5□□□□□ -0.57
ARRDC3-205ENST00000508948 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
ARRDC3-205ENST00000508948 PDE3BQ13370 1112 aa11.49□□□□□ -0.57
ARRDC3-205ENST00000508948 DDB1Q16531 1140 aa11.49□□□□□ -0.57
ARRDC3-205ENST00000508948 MARCH10Q8NA82 808 aaPredicted RBP11.49□□□□□ -0.57
ARRDC3-205ENST00000508948 EXOC5O00471 708 aa11.48□□□□□ -0.57
ARRDC3-205ENST00000508948 PPP2R1AP30153 589 aa11.48□□□□□ -0.57
ARRDC3-205ENST00000508948 CDCA7Q9BWT1 371 aaPredicted RBP11.48□□□□□ -0.57
ARRDC3-205ENST00000508948 MEGF6O75095 1541 aa11.48□□□□□ -0.57
ARRDC3-205ENST00000508948 IL13P35225 146 aa11.47□□□□□ -0.57
ARRDC3-205ENST00000508948 NCAPD2Q15021 1401 aa11.45□□□□□ -0.58
ARRDC3-205ENST00000508948 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
ARRDC3-205ENST00000508948 TATP17735 454 aaPredicted RBP11.45□□□□□ -0.58
ARRDC3-205ENST00000508948 PTF1AQ7RTS3 328 aa11.45□□□□□ -0.58
ARRDC3-205ENST00000508948 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
ARRDC3-205ENST00000508948 DDX54Q8TDD1 881 aaKnown RBP11.45□□□□□ -0.58
ARRDC3-205ENST00000508948 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 OVOS2A0A0G2JMS6 1433 aa11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 TNS2Q63HR2 1409 aa11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 IGSF1Q8N6C5 1336 aa11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 TRIM37O94972 964 aa11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 FAM196AQ6ZSG2 479 aa11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 ZCRB1Q8TBF4 217 aaKnown RBP11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 RAPGEF4Q8WZA2 1011 aa11.44□□□□□ -0.58
ARRDC3-205ENST00000508948 SHANK3Q9BYB0 1731 aa11.43□□□□□ -0.58
ARRDC3-205ENST00000508948 DIAPH1O60610 1272 aaKnown RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms