RNA–Protein interactions for RNA: ENST00000508800.1

NEDD9-212, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-212ENST00000508800 CDCA7Q9BWT1 371 aaPredicted RBP16.69■□□□□ 0.26
NEDD9-212ENST00000508800 GPR162Q16538 588 aa16.68■□□□□ 0.26
NEDD9-212ENST00000508800 TXNRD1Q16881 649 aa16.68■□□□□ 0.26
NEDD9-212ENST00000508800 ABTB2Q8N961 1025 aa16.68■□□□□ 0.26
NEDD9-212ENST00000508800 NLRP13Q86W25 1043 aa16.67■□□□□ 0.26
NEDD9-212ENST00000508800 GCP02774 474 aa16.66■□□□□ 0.26
NEDD9-212ENST00000508800 ARHGEF28Q8N1W1 1705 aaKnown RBP16.66■□□□□ 0.26
NEDD9-212ENST00000508800 ACEP12821 1306 aa16.65■□□□□ 0.26
NEDD9-212ENST00000508800 SHANK3Q9BYB0 1731 aa16.65■□□□□ 0.26
NEDD9-212ENST00000508800 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.26
NEDD9-212ENST00000508800 CCDC61Q9Y6R9 512 aa16.64■□□□□ 0.25
NEDD9-212ENST00000508800 PLEKHG3A1L390 1219 aa16.63■□□□□ 0.25
NEDD9-212ENST00000508800 PTF1AQ7RTS3 328 aa16.62■□□□□ 0.25
NEDD9-212ENST00000508800 PPARGC1BQ86YN6 1023 aaKnown RBP16.62■□□□□ 0.25
NEDD9-212ENST00000508800 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
NEDD9-212ENST00000508800 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
NEDD9-212ENST00000508800 PAPPAQ13219 1627 aa16.61■□□□□ 0.25
NEDD9-212ENST00000508800 TOM1L2Q6ZVM7 507 aa16.61■□□□□ 0.25
NEDD9-212ENST00000508800 NHSQ6T4R5 1651 aa16.6■□□□□ 0.25
NEDD9-212ENST00000508800 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
NEDD9-212ENST00000508800 QSER1Q2KHR3 1735 aa16.59■□□□□ 0.25
NEDD9-212ENST00000508800 SLC16A10Q8TF71 515 aa16.59■□□□□ 0.25
NEDD9-212ENST00000508800 CDK19Q9BWU1 502 aa16.59■□□□□ 0.25
NEDD9-212ENST00000508800 COL24A1Q17RW2 1714 aa16.59■□□□□ 0.25
NEDD9-212ENST00000508800 SLIT3O75094 1523 aa16.58■□□□□ 0.24
NEDD9-212ENST00000508800 COL18A1P39060 1754 aa16.58■□□□□ 0.24
NEDD9-212ENST00000508800 GRIN3BO60391 1043 aa16.57■□□□□ 0.24
NEDD9-212ENST00000508800 POLD1P28340 1107 aa16.57■□□□□ 0.24
NEDD9-212ENST00000508800 TNS2Q63HR2 1409 aa16.55■□□□□ 0.24
NEDD9-212ENST00000508800 EXOC5O00471 708 aa16.55■□□□□ 0.24
NEDD9-212ENST00000508800 HSPA6P17066 643 aa16.55■□□□□ 0.24
NEDD9-212ENST00000508800 KAT6BQ8WYB5 2073 aa16.55■□□□□ 0.24
NEDD9-212ENST00000508800 PELP1Q8IZL8 1130 aaKnown RBP16.54■□□□□ 0.24
NEDD9-212ENST00000508800 CARD10Q9BWT7 1032 aa16.54■□□□□ 0.24
NEDD9-212ENST00000508800 CCDC7Q96M83 1385 aa16.53■□□□□ 0.24
NEDD9-212ENST00000508800 TRPM1Q7Z4N2 1603 aa16.53■□□□□ 0.24
NEDD9-212ENST00000508800 ZBTB7CA1YPR0 619 aa16.53■□□□□ 0.24
NEDD9-212ENST00000508800 ABCC6O95255 1503 aa16.53■□□□□ 0.24
NEDD9-212ENST00000508800 CPSF1Q10570 1443 aaKnown RBP16.53■□□□□ 0.24
NEDD9-212ENST00000508800 BTAF1O14981 1849 aa16.52■□□□□ 0.24
NEDD9-212ENST00000508800 NLRP6P59044 892 aa16.52■□□□□ 0.24
NEDD9-212ENST00000508800 PPIP5K1Q6PFW1 1433 aa16.52■□□□□ 0.23
NEDD9-212ENST00000508800 KLHL34Q8N239 644 aa16.51■□□□□ 0.23
NEDD9-212ENST00000508800 ATP10DQ9P241 1426 aa16.51■□□□□ 0.23
NEDD9-212ENST00000508800 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
NEDD9-212ENST00000508800 GPBP1L1Q9HC44 474 aaPredicted RBP16.5■□□□□ 0.23
NEDD9-212ENST00000508800 RGPD5Q99666 1765 aa16.5■□□□□ 0.23
NEDD9-212ENST00000508800 USP6P35125 1406 aa16.49■□□□□ 0.23
NEDD9-212ENST00000508800 QRICH2Q9H0J4 1663 aa16.49■□□□□ 0.23
NEDD9-212ENST00000508800 CSB-PGBD3P0DP91 1061 aa16.48■□□□□ 0.23
NEDD9-212ENST00000508800 ZNF827Q17R98 1081 aa16.48■□□□□ 0.23
NEDD9-212ENST00000508800 KDM2AQ9Y2K7 1162 aa16.48■□□□□ 0.23
NEDD9-212ENST00000508800 AXIN2Q9Y2T1 843 aa16.48■□□□□ 0.23
NEDD9-212ENST00000508800 PIK3C2AO00443 1686 aa16.48■□□□□ 0.23
NEDD9-212ENST00000508800 SLC27A3Q5K4L6 730 aa16.47■□□□□ 0.23
NEDD9-212ENST00000508800 KCNH5Q8NCM2 988 aa16.47■□□□□ 0.23
NEDD9-212ENST00000508800 KIAA1210Q9ULL0 1709 aa16.47■□□□□ 0.23
NEDD9-212ENST00000508800 ARHGEF25Q86VW2 580 aa16.46■□□□□ 0.23
NEDD9-212ENST00000508800 AKT1S1Q96B36 256 aa16.46■□□□□ 0.23
NEDD9-212ENST00000508800 SRPK2P78362 688 aaKnown RBP16.45■□□□□ 0.22
NEDD9-212ENST00000508800 NLGN2Q8NFZ4 835 aa16.45■□□□□ 0.22
NEDD9-212ENST00000508800 TUBGCP6Q96RT7 1819 aa16.45■□□□□ 0.22
NEDD9-212ENST00000508800 ADCY9O60503 1353 aa16.44■□□□□ 0.22
NEDD9-212ENST00000508800 YBX3P16989 372 aaKnown RBP eCLIP16.44■□□□□ 0.22
NEDD9-212ENST00000508800 PNPLA7Q6ZV29 1317 aa16.44■□□□□ 0.22
NEDD9-212ENST00000508800 ACSBG1Q96GR2 724 aa16.43■□□□□ 0.22
NEDD9-212ENST00000508800 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
NEDD9-212ENST00000508800 TFCP2L1Q9NZI6 479 aa16.42■□□□□ 0.22
NEDD9-212ENST00000508800 APLP1P51693 650 aa16.4■□□□□ 0.22
NEDD9-212ENST00000508800 NFAT5O94916 1531 aa16.4■□□□□ 0.22
NEDD9-212ENST00000508800 IL2RBP14784 551 aa16.38■□□□□ 0.21
NEDD9-212ENST00000508800 CABP1Q9NZU7 370 aa16.38■□□□□ 0.21
NEDD9-212ENST00000508800 TTC21AQ8NDW8 1320 aa16.38■□□□□ 0.21
NEDD9-212ENST00000508800 CENPJQ9HC77 1338 aaPredicted RBP16.38■□□□□ 0.21
NEDD9-212ENST00000508800 CABP2Q9NPB3 220 aa16.37■□□□□ 0.21
NEDD9-212ENST00000508800 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
NEDD9-212ENST00000508800 LY75O60449 1722 aa16.36■□□□□ 0.21
NEDD9-212ENST00000508800 ZNF692Q9BU19 519 aaPredicted RBP16.36■□□□□ 0.21
NEDD9-212ENST00000508800 ERBB3P21860 1342 aa16.36■□□□□ 0.21
NEDD9-212ENST00000508800 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
NEDD9-212ENST00000508800 ZNF526Q8TF50 670 aaPredicted RBP16.34■□□□□ 0.21
NEDD9-212ENST00000508800 NLRP2Q9NX02 1062 aa16.34■□□□□ 0.21
NEDD9-212ENST00000508800 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
NEDD9-212ENST00000508800 PCNTO95613 3336 aa16.33■□□□□ 0.2
NEDD9-212ENST00000508800 SOX12O15370 315 aa16.32■□□□□ 0.2
NEDD9-212ENST00000508800 USP54Q70EL1 1684 aa16.31■□□□□ 0.2
NEDD9-212ENST00000508800 LTN1O94822 1766 aa16.31■□□□□ 0.2
NEDD9-212ENST00000508800 FAM208AQ9UK61 1670 aaKnown RBP16.3■□□□□ 0.2
NEDD9-212ENST00000508800 KIF3CO14782 793 aa16.3■□□□□ 0.2
NEDD9-212ENST00000508800 DNAJC5GQ8N7S2 189 aa16.3■□□□□ 0.2
NEDD9-212ENST00000508800 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
NEDD9-212ENST00000508800 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
NEDD9-212ENST00000508800 MSH5O43196 834 aa16.29■□□□□ 0.2
NEDD9-212ENST00000508800 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
NEDD9-212ENST00000508800 TOMM70O94826 608 aa16.28■□□□□ 0.2
NEDD9-212ENST00000508800 FLAD1Q8NFF5 587 aa16.28■□□□□ 0.2
NEDD9-212ENST00000508800 WDR90Q96KV7 1748 aa16.28■□□□□ 0.2
NEDD9-212ENST00000508800 RAB3GAP2Q9H2M9 1393 aa16.27■□□□□ 0.2
NEDD9-212ENST00000508800 COL23A1Q86Y22 540 aaPredicted RBP16.27■□□□□ 0.2
NEDD9-212ENST00000508800 CCNL1Q9UK58 526 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms