RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 U2SURPO15042 1029 aaKnown RBP14.73□□□□□ -0.05
BRCC3P1-201ENST00000508559 HOXC9P31274 260 aa14.73□□□□□ -0.05
BRCC3P1-201ENST00000508559 SMG6Q86US8 1419 aaKnown RBP14.73□□□□□ -0.05
BRCC3P1-201ENST00000508559 CPDO75976 1380 aa14.73□□□□□ -0.05
BRCC3P1-201ENST00000508559 MARF1Q9Y4F3 1742 aaKnown RBP14.72□□□□□ -0.05
BRCC3P1-201ENST00000508559 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
BRCC3P1-201ENST00000508559 CSB-PGBD3P0DP91 1061 aa14.72□□□□□ -0.05
BRCC3P1-201ENST00000508559 EVA1CP58658 441 aa14.72□□□□□ -0.05
BRCC3P1-201ENST00000508559 CCDC184Q52MB2 194 aa14.72□□□□□ -0.05
BRCC3P1-201ENST00000508559 HSP90AB2PQ58FF8 381 aa14.72□□□□□ -0.05
BRCC3P1-201ENST00000508559 FAM9BQ8IZU0 186 aa14.72□□□□□ -0.05
BRCC3P1-201ENST00000508559 COL22A1Q8NFW1 1626 aaPredicted RBP14.71□□□□□ -0.05
BRCC3P1-201ENST00000508559 SHPRHQ149N8 1683 aa14.71□□□□□ -0.06
BRCC3P1-201ENST00000508559 U2AF1L5P0DN76 240 aaPredicted RBP14.7□□□□□ -0.06
BRCC3P1-201ENST00000508559 U2AF1Q01081 240 aaKnown RBP eCLIP14.7□□□□□ -0.06
BRCC3P1-201ENST00000508559 INSRP06213 1382 aa14.7□□□□□ -0.06
BRCC3P1-201ENST00000508559 FAM83GA6ND36 823 aa14.69□□□□□ -0.06
BRCC3P1-201ENST00000508559 EIF4A2Q14240 407 aaKnown RBP14.69□□□□□ -0.06
BRCC3P1-201ENST00000508559 ANKRD24Q8TF21 1146 aa14.69□□□□□ -0.06
BRCC3P1-201ENST00000508559 NGLY1Q96IV0 654 aa14.69□□□□□ -0.06
BRCC3P1-201ENST00000508559 LTN1O94822 1766 aa14.69□□□□□ -0.06
BRCC3P1-201ENST00000508559 BLMP54132 1417 aaPredicted RBP14.68□□□□□ -0.06
BRCC3P1-201ENST00000508559 C8orf37Q96NL8 207 aa14.68□□□□□ -0.06
BRCC3P1-201ENST00000508559 STRN4Q9NRL3 753 aa14.68□□□□□ -0.06
BRCC3P1-201ENST00000508559 ABCA3Q99758 1704 aa14.68□□□□□ -0.06
BRCC3P1-201ENST00000508559 CRYBG1Q9Y4K1 1723 aa14.68□□□□□ -0.06
BRCC3P1-201ENST00000508559 NEFMP07197 916 aa14.67□□□□□ -0.06
BRCC3P1-201ENST00000508559 NLRP2Q9NX02 1062 aa14.67□□□□□ -0.06
BRCC3P1-201ENST00000508559 BTG4Q9NY30 223 aa14.67□□□□□ -0.06
BRCC3P1-201ENST00000508559 AXIN2Q9Y2T1 843 aa14.67□□□□□ -0.06
BRCC3P1-201ENST00000508559 IL13P35225 146 aa14.66□□□□□ -0.06
BRCC3P1-201ENST00000508559 PNISRQ8TF01 805 aaKnown RBP14.66□□□□□ -0.06
BRCC3P1-201ENST00000508559 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
BRCC3P1-201ENST00000508559 PEAK1Q9H792 1746 aa14.66□□□□□ -0.06
BRCC3P1-201ENST00000508559 TOM1L2Q6ZVM7 507 aa14.65□□□□□ -0.06
BRCC3P1-201ENST00000508559 ADAMTS8Q9UP79 889 aa14.64□□□□□ -0.07
BRCC3P1-201ENST00000508559 CCDC9Q9Y3X0 531 aaKnown RBP14.64□□□□□ -0.07
BRCC3P1-201ENST00000508559 ABCC6O95255 1503 aa14.64□□□□□ -0.07
BRCC3P1-201ENST00000508559 ERBB3P21860 1342 aa14.64□□□□□ -0.07
BRCC3P1-201ENST00000508559 COL3A1P02461 1466 aaPredicted RBP14.63□□□□□ -0.07
BRCC3P1-201ENST00000508559 COL14A1Q05707 1796 aaKnown RBP14.63□□□□□ -0.07
BRCC3P1-201ENST00000508559 HMOX1P09601 288 aa14.63□□□□□ -0.07
BRCC3P1-201ENST00000508559 SULT6B1Q6IMI4 303 aa14.63□□□□□ -0.07
BRCC3P1-201ENST00000508559 USHBP1Q8N6Y0 703 aa14.62□□□□□ -0.07
BRCC3P1-201ENST00000508559 EYA1Q99502 592 aa14.62□□□□□ -0.07
BRCC3P1-201ENST00000508559 WDR17Q8IZU2 1322 aa14.62□□□□□ -0.07
BRCC3P1-201ENST00000508559 MAPK8IP3Q9UPT6 1336 aa14.62□□□□□ -0.07
BRCC3P1-201ENST00000508559 FCHSD2O94868 740 aa14.61□□□□□ -0.07
BRCC3P1-201ENST00000508559 LRP6O75581 1613 aa14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 NBPF6Q5VWK0 638 aa14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 LARP1Q6PKG0 1096 aaKnown RBP14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 CCDC146Q8IYE0 955 aa14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 NBPF4Q96M43 638 aa14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 YTHDC1Q96MU7 727 aaKnown RBP14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 USP21Q9UK80 565 aa14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 CAMTA1Q9Y6Y1 1673 aa14.6□□□□□ -0.07
BRCC3P1-201ENST00000508559 COL5A2P05997 1499 aaPredicted RBP14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 PRKAR2BP31323 418 aa14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 UNC5CLQ8IV45 518 aa14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 RAPGEF4Q8WZA2 1011 aa14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 USP35Q9P2H5 1018 aa14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 COL18A1P39060 1754 aa14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 AFF2P51816 1311 aa14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 IGSF1Q8N6C5 1336 aa14.59□□□□□ -0.07
BRCC3P1-201ENST00000508559 RGPD5Q99666 1765 aa14.58□□□□□ -0.08
BRCC3P1-201ENST00000508559 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
BRCC3P1-201ENST00000508559 RUNDC1Q96C34 613 aa14.58□□□□□ -0.08
BRCC3P1-201ENST00000508559 CARD10Q9BWT7 1032 aa14.58□□□□□ -0.08
BRCC3P1-201ENST00000508559 LMO7Q8WWI1 1683 aa14.58□□□□□ -0.08
BRCC3P1-201ENST00000508559 TATP17735 454 aaPredicted RBP14.57□□□□□ -0.08
BRCC3P1-201ENST00000508559 FNBP4Q8N3X1 1017 aaPredicted RBP14.57□□□□□ -0.08
BRCC3P1-201ENST00000508559 CRB1P82279 1406 aa14.57□□□□□ -0.08
BRCC3P1-201ENST00000508559 PLCH1Q4KWH8 1693 aa14.56□□□□□ -0.08
BRCC3P1-201ENST00000508559 HNRNPUQ00839 825 aaKnown RBP eCLIP14.56□□□□□ -0.08
BRCC3P1-201ENST00000508559 RSPH6AQ9H0K4 717 aa14.56□□□□□ -0.08
BRCC3P1-201ENST00000508559 SLIT2O94813 1529 aa14.56□□□□□ -0.08
BRCC3P1-201ENST00000508559 A0A0G2JS52 829 aa14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 MYT1Q01538 1121 aa14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 VPS72Q15906 364 aa14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 PLEKHO1Q53GL0 409 aaPredicted RBP14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 ILDR1Q86SU0 546 aaPredicted RBP14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 TCP11L2Q8N4U5 519 aa14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 SALL2Q9Y467 1007 aaPredicted RBP14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 FAM208AQ9UK61 1670 aaKnown RBP14.54□□□□□ -0.08
BRCC3P1-201ENST00000508559 NWD2Q9ULI1 1742 aa14.53□□□□□ -0.08
BRCC3P1-201ENST00000508559 SENP3-EIF4A1A0A087X0R7 540 aa14.53□□□□□ -0.08
BRCC3P1-201ENST00000508559 APAF1O14727 1248 aa14.53□□□□□ -0.08
BRCC3P1-201ENST00000508559 NEUROD2Q15784 382 aa14.53□□□□□ -0.08
BRCC3P1-201ENST00000508559 ZNF772Q68DY9 489 aaPredicted RBP14.53□□□□□ -0.08
BRCC3P1-201ENST00000508559 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
BRCC3P1-201ENST00000508559 KDRP35968 1356 aa14.52□□□□□ -0.08
BRCC3P1-201ENST00000508559 IL2RBP14784 551 aa14.52□□□□□ -0.09
BRCC3P1-201ENST00000508559 AMOTQ4VCS5 1084 aa14.52□□□□□ -0.09
BRCC3P1-201ENST00000508559 QTRT2Q9H974 415 aaKnown RBP14.52□□□□□ -0.09
BRCC3P1-201ENST00000508559 SPG7Q9UQ90 795 aa14.52□□□□□ -0.09
BRCC3P1-201ENST00000508559 THRAP3Q9Y2W1 955 aaKnown RBP14.52□□□□□ -0.09
BRCC3P1-201ENST00000508559 BCL9LQ86UU0 1499 aa14.51□□□□□ -0.09
BRCC3P1-201ENST00000508559 SPATA31A1Q5TZJ5 1347 aa14.51□□□□□ -0.09
BRCC3P1-201ENST00000508559 SPATA31A5Q5VU36 1347 aa14.51□□□□□ -0.09
BRCC3P1-201ENST00000508559 SPATA31A7Q8IWB4 1347 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms