RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ZC3H4Q9UPT8 1303 aaKnown RBP9.3□□□□□ -0.92
PDLIM5-211ENST00000508531 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
PDLIM5-211ENST00000508531 MEIOBQ8N635 442 aa9.29□□□□□ -0.92
PDLIM5-211ENST00000508531 SLC10A4Q96EP9 437 aa9.29□□□□□ -0.92
PDLIM5-211ENST00000508531 UPP2O95045 317 aa9.28□□□□□ -0.92
PDLIM5-211ENST00000508531 BMP2P12643 396 aa9.28□□□□□ -0.92
PDLIM5-211ENST00000508531 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
PDLIM5-211ENST00000508531 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
PDLIM5-211ENST00000508531 OCSTAMPQ9BR26 566 aa9.28□□□□□ -0.92
PDLIM5-211ENST00000508531 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
PDLIM5-211ENST00000508531 PTK2Q05397 1052 aa9.27□□□□□ -0.93
PDLIM5-211ENST00000508531 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
PDLIM5-211ENST00000508531 PPP1R26Q5T8A7 1209 aaPredicted RBP9.26□□□□□ -0.93
PDLIM5-211ENST00000508531 NPAS3Q8IXF0 933 aa9.26□□□□□ -0.93
PDLIM5-211ENST00000508531 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
PDLIM5-211ENST00000508531 H3BM21 787 aa9.25□□□□□ -0.93
PDLIM5-211ENST00000508531 MAN1A2O60476 641 aa9.25□□□□□ -0.93
PDLIM5-211ENST00000508531 INSM1Q01101 510 aaPredicted RBP9.25□□□□□ -0.93
PDLIM5-211ENST00000508531 ADAM32Q8TC27 787 aa9.25□□□□□ -0.93
PDLIM5-211ENST00000508531 CDV3Q9UKY7 258 aaKnown RBP9.25□□□□□ -0.93
PDLIM5-211ENST00000508531 GMPRP36959 345 aa9.24□□□□□ -0.93
PDLIM5-211ENST00000508531 CBLBQ13191 982 aa9.24□□□□□ -0.93
PDLIM5-211ENST00000508531 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
PDLIM5-211ENST00000508531 IRF7Q92985 503 aa9.24□□□□□ -0.93
PDLIM5-211ENST00000508531 PGPEP1Q9NXJ5 209 aa9.24□□□□□ -0.93
PDLIM5-211ENST00000508531 GPSM3Q9Y4H4 160 aa9.24□□□□□ -0.93
PDLIM5-211ENST00000508531 BRPF1P55201 1214 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-211ENST00000508531 INTS6LQ5JSJ4 861 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-211ENST00000508531 TSEN34Q9BSV6 310 aaKnown RBP9.23□□□□□ -0.93
PDLIM5-211ENST00000508531 ERBB4Q15303 1308 aa9.23□□□□□ -0.93
PDLIM5-211ENST00000508531 SOS2Q07890 1332 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-211ENST00000508531 RAB15P59190 212 aa9.21□□□□□ -0.94
PDLIM5-211ENST00000508531 DHX9Q08211 1270 aaKnown RBP9.21□□□□□ -0.94
PDLIM5-211ENST00000508531 TMEM259Q4ZIN3 620 aa9.21□□□□□ -0.94
PDLIM5-211ENST00000508531 TRIM34Q9BYJ4 488 aa9.21□□□□□ -0.94
PDLIM5-211ENST00000508531 DNMT3LQ9UJW3 386 aa9.21□□□□□ -0.94
PDLIM5-211ENST00000508531 Q6ZVU0 165 aa9.2□□□□□ -0.94
PDLIM5-211ENST00000508531 DZIP3Q86Y13 1208 aaKnown RBP9.2□□□□□ -0.94
PDLIM5-211ENST00000508531 TMPRSS4Q9NRS4 437 aa9.19□□□□□ -0.94
PDLIM5-211ENST00000508531 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
PDLIM5-211ENST00000508531 NBPF20Q3BBV1 942 aa9.18□□□□□ -0.94
PDLIM5-211ENST00000508531 TTLL8A6PVC2 850 aa9.17□□□□□ -0.94
PDLIM5-211ENST00000508531 TPRNQ4KMQ1 711 aa9.17□□□□□ -0.94
PDLIM5-211ENST00000508531 AGBL1Q96MI9 1066 aa9.17□□□□□ -0.94
PDLIM5-211ENST00000508531 FIGNL2A6NMB9 653 aa9.16□□□□□ -0.94
PDLIM5-211ENST00000508531 PPFIA3O75145 1194 aa9.16□□□□□ -0.94
PDLIM5-211ENST00000508531 GJD4Q96KN9 370 aaPredicted RBP9.16□□□□□ -0.94
PDLIM5-211ENST00000508531 SPINT1O43278 529 aa9.15□□□□□ -0.94
PDLIM5-211ENST00000508531 RELBQ01201 579 aa9.15□□□□□ -0.94
PDLIM5-211ENST00000508531 ZNF784Q8NCA9 323 aaPredicted RBP9.15□□□□□ -0.94
PDLIM5-211ENST00000508531 ERVH48-1M5A8F1 160 aa9.14□□□□□ -0.95
PDLIM5-211ENST00000508531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.14□□□□□ -0.95
PDLIM5-211ENST00000508531 ZBBXA8MT70 800 aa9.13□□□□□ -0.95
PDLIM5-211ENST00000508531 VSIG8P0DPA2 414 aa9.13□□□□□ -0.95
PDLIM5-211ENST00000508531 ESPNB1AK53 854 aa9.12□□□□□ -0.95
PDLIM5-211ENST00000508531 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-211ENST00000508531 CTSOP43234 321 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-211ENST00000508531 ZSCAN1Q8NBB4 408 aa9.12□□□□□ -0.95
PDLIM5-211ENST00000508531 INSM2Q96T92 566 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-211ENST00000508531 ZNF395Q9H8N7 513 aaPredicted RBP9.12□□□□□ -0.95
PDLIM5-211ENST00000508531 PCDHB9Q9Y5E1 797 aa9.12□□□□□ -0.95
PDLIM5-211ENST00000508531 FBXO45P0C2W1 286 aa9.11□□□□□ -0.95
PDLIM5-211ENST00000508531 ADD1P35611 737 aaKnown RBP9.11□□□□□ -0.95
PDLIM5-211ENST00000508531 PTSQ03393 145 aa9.11□□□□□ -0.95
PDLIM5-211ENST00000508531 POLMQ9NP87 494 aaPredicted RBP9.11□□□□□ -0.95
PDLIM5-211ENST00000508531 LILRA1O75019 489 aa9.1□□□□□ -0.95
PDLIM5-211ENST00000508531 ADH1AP07327 375 aa9.1□□□□□ -0.95
PDLIM5-211ENST00000508531 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
PDLIM5-211ENST00000508531 CYLDQ9NQC7 956 aa9.09□□□□□ -0.95
PDLIM5-211ENST00000508531 SEPT12Q8IYM1 358 aa9.08□□□□□ -0.96
PDLIM5-211ENST00000508531 BANK1Q8NDB2 785 aa9.08□□□□□ -0.96
PDLIM5-211ENST00000508531 FAM181BA6NEQ2 426 aa9.07□□□□□ -0.96
PDLIM5-211ENST00000508531 CCDC155Q8N6L0 562 aa9.07□□□□□ -0.96
PDLIM5-211ENST00000508531 MTMR14Q8NCE2 650 aa9.07□□□□□ -0.96
PDLIM5-211ENST00000508531 RNF217Q8TC41 542 aa9.07□□□□□ -0.96
PDLIM5-211ENST00000508531 SNRKQ9NRH2 765 aa9.07□□□□□ -0.96
PDLIM5-211ENST00000508531 PTGIRP43119 386 aa9.06□□□□□ -0.96
PDLIM5-211ENST00000508531 KDF1Q8NAX2 398 aaPredicted RBP9.06□□□□□ -0.96
PDLIM5-211ENST00000508531 SLC35F4A4IF30 521 aa9.05□□□□□ -0.96
PDLIM5-211ENST00000508531 NR1H3Q13133 447 aa9.05□□□□□ -0.96
PDLIM5-211ENST00000508531 FOXD4L5Q5VV16 416 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-211ENST00000508531 GPR161Q8N6U8 529 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-211ENST00000508531 NDUFB9Q9Y6M9 179 aa9.05□□□□□ -0.96
PDLIM5-211ENST00000508531 GPR37L1O60883 481 aa9.04□□□□□ -0.96
PDLIM5-211ENST00000508531 ATP5J2-PTCD1G3V325 749 aa9.01□□□□□ -0.97
PDLIM5-211ENST00000508531 SOCS7O14512 581 aa9.01□□□□□ -0.97
PDLIM5-211ENST00000508531 ITGA6P23229 1130 aa9.01□□□□□ -0.97
PDLIM5-211ENST00000508531 KRT76Q01546 638 aa9.01□□□□□ -0.97
PDLIM5-211ENST00000508531 TRIM52Q96A61 297 aa9.01□□□□□ -0.97
PDLIM5-211ENST00000508531 ZNF330Q9Y3S2 320 aaPredicted RBP9.01□□□□□ -0.97
PDLIM5-211ENST00000508531 SENP3-EIF4A1A0A087X0R7 540 aa9□□□□□ -0.97
PDLIM5-211ENST00000508531 CDC14CA4D256 554 aa9□□□□□ -0.97
PDLIM5-211ENST00000508531 APBB1O00213 710 aa9□□□□□ -0.97
PDLIM5-211ENST00000508531 RNF20Q5VTR2 975 aa9□□□□□ -0.97
PDLIM5-211ENST00000508531 LYSMD3Q7Z3D4 306 aa9□□□□□ -0.97
PDLIM5-211ENST00000508531 NANOS1Q8WY41 292 aaKnown RBP9□□□□□ -0.97
PDLIM5-211ENST00000508531 CNTNAP3BQ96NU0 1288 aa9□□□□□ -0.97
PDLIM5-211ENST00000508531 CNTNAP3Q9BZ76 1288 aa9□□□□□ -0.97
PDLIM5-211ENST00000508531 MCCD1P59942 119 aaPredicted RBP8.99□□□□□ -0.97
PDLIM5-211ENST00000508531 ERVK-9P63128 1117 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms