RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 LTN1O94822 1766 aa23■■□□□ 1.27
LMNA-222ENST00000508500 SBF2Q86WG5 1849 aa22.99■■□□□ 1.27
LMNA-222ENST00000508500 LRRC37A3O60309 1634 aa22.98■■□□□ 1.27
LMNA-222ENST00000508500 ST20-MTHFSA0A0A6YYL1 179 aa22.98■■□□□ 1.27
LMNA-222ENST00000508500 FAM196AQ6ZSG2 479 aa22.98■■□□□ 1.27
LMNA-222ENST00000508500 THRAP3Q9Y2W1 955 aaKnown RBP22.98■■□□□ 1.27
LMNA-222ENST00000508500 USP31Q70CQ4 1352 aa22.98■■□□□ 1.27
LMNA-222ENST00000508500 SOX12O15370 315 aa22.97■■□□□ 1.27
LMNA-222ENST00000508500 EZH2Q15910 746 aaKnown RBP22.97■■□□□ 1.27
LMNA-222ENST00000508500 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.97■■□□□ 1.27
LMNA-222ENST00000508500 KCNH5Q8NCM2 988 aa22.97■■□□□ 1.27
LMNA-222ENST00000508500 TMC1Q8TDI8 760 aa22.97■■□□□ 1.27
LMNA-222ENST00000508500 NME9Q86XW9 330 aa22.96■■□□□ 1.27
LMNA-222ENST00000508500 PARD3Q8TEW0 1356 aa22.96■■□□□ 1.27
LMNA-222ENST00000508500 A0A1W2PP64 1363 aa22.95■■□□□ 1.26
LMNA-222ENST00000508500 TRIM37O94972 964 aa22.95■■□□□ 1.26
LMNA-222ENST00000508500 PUS7Q96PZ0 661 aaKnown RBP22.95■■□□□ 1.26
LMNA-222ENST00000508500 RGPD3A6NKT7 1758 aaPredicted RBP22.94■■□□□ 1.26
LMNA-222ENST00000508500 RGPD4Q7Z3J3 1758 aa22.94■■□□□ 1.26
LMNA-222ENST00000508500 WDR17Q8IZU2 1322 aa22.93■■□□□ 1.26
LMNA-222ENST00000508500 PDE3BQ13370 1112 aa22.93■■□□□ 1.26
LMNA-222ENST00000508500 R3HDM1Q15032 1099 aaKnown RBP22.93■■□□□ 1.26
LMNA-222ENST00000508500 TOM1L2Q6ZVM7 507 aa22.92■■□□□ 1.26
LMNA-222ENST00000508500 EDC4Q6P2E9 1401 aaKnown RBP22.91■■□□□ 1.26
LMNA-222ENST00000508500 ABCC6O95255 1503 aa22.91■■□□□ 1.26
LMNA-222ENST00000508500 HDGFL2Q7Z4V5 671 aaPredicted RBP22.9■■□□□ 1.26
LMNA-222ENST00000508500 OVOS2A0A0J9YW53 1432 aa22.89■■□□□ 1.25
LMNA-222ENST00000508500 OVOS2Q6IE36 1432 aa22.89■■□□□ 1.25
LMNA-222ENST00000508500 APBA3O96018 575 aa22.87■■□□□ 1.25
LMNA-222ENST00000508500 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
LMNA-222ENST00000508500 USP47Q96K76 1375 aa22.87■■□□□ 1.25
LMNA-222ENST00000508500 CARD10Q9BWT7 1032 aa22.86■■□□□ 1.25
LMNA-222ENST00000508500 DDB1Q16531 1140 aa22.84■■□□□ 1.25
LMNA-222ENST00000508500 NINLQ9Y2I6 1382 aa22.84■■□□□ 1.25
LMNA-222ENST00000508500 OVOS2A0A0G2JMS6 1433 aa22.82■■□□□ 1.24
LMNA-222ENST00000508500 RGPD2P0DJD1 1756 aa22.82■■□□□ 1.24
LMNA-222ENST00000508500 CSB-PGBD3P0DP91 1061 aa22.82■■□□□ 1.24
LMNA-222ENST00000508500 MARCH10Q8NA82 808 aaPredicted RBP22.82■■□□□ 1.24
LMNA-222ENST00000508500 PCGF6Q9BYE7 350 aa22.82■■□□□ 1.24
LMNA-222ENST00000508500 PTF1AQ7RTS3 328 aa22.81■■□□□ 1.24
LMNA-222ENST00000508500 BCL9O00512 1426 aa22.81■■□□□ 1.24
LMNA-222ENST00000508500 CASZ1Q86V15 1759 aa22.81■■□□□ 1.24
LMNA-222ENST00000508500 ERBB3P21860 1342 aa22.81■■□□□ 1.24
LMNA-222ENST00000508500 MYOM1P52179 1685 aa22.81■■□□□ 1.24
LMNA-222ENST00000508500 SLC24A1O60721 1099 aa22.8■■□□□ 1.24
LMNA-222ENST00000508500 CCDC7Q96M83 1385 aa22.79■■□□□ 1.24
LMNA-222ENST00000508500 CDCA7Q9BWT1 371 aaPredicted RBP22.79■■□□□ 1.24
LMNA-222ENST00000508500 ANKRD36BQ8N2N9 1353 aa22.78■■□□□ 1.24
LMNA-222ENST00000508500 C11orf95C9JLR9 678 aaPredicted RBP22.78■■□□□ 1.24
LMNA-222ENST00000508500 FBLN1P23142 703 aa22.78■■□□□ 1.24
LMNA-222ENST00000508500 TMF1P82094 1093 aa22.78■■□□□ 1.24
LMNA-222ENST00000508500 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
LMNA-222ENST00000508500 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
LMNA-222ENST00000508500 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
LMNA-222ENST00000508500 KIF20BQ96Q89 1820 aa22.78■■□□□ 1.24
LMNA-222ENST00000508500 ANKRD24Q8TF21 1146 aa22.76■■□□□ 1.23
LMNA-222ENST00000508500 FAM208AQ9UK61 1670 aaKnown RBP22.75■■□□□ 1.23
LMNA-222ENST00000508500 PLSCR1O15162 318 aa22.74■■□□□ 1.23
LMNA-222ENST00000508500 IP6K1Q92551 441 aa22.74■■□□□ 1.23
LMNA-222ENST00000508500 NLRP2Q9NX02 1062 aa22.74■■□□□ 1.23
LMNA-222ENST00000508500 TNS2Q63HR2 1409 aa22.74■■□□□ 1.23
LMNA-222ENST00000508500 EXOC5O00471 708 aa22.73■■□□□ 1.23
LMNA-222ENST00000508500 FYB1O15117 783 aa22.72■■□□□ 1.23
LMNA-222ENST00000508500 COG3Q96JB2 828 aa22.72■■□□□ 1.23
LMNA-222ENST00000508500 BCL11BQ9C0K0 894 aaPredicted RBP22.72■■□□□ 1.23
LMNA-222ENST00000508500 MAP3K19Q56UN5 1328 aa22.72■■□□□ 1.23
LMNA-222ENST00000508500 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
LMNA-222ENST00000508500 NBPF14Q5TI25 921 aa22.7■■□□□ 1.22
LMNA-222ENST00000508500 GGNBP2Q9H3C7 697 aa22.7■■□□□ 1.22
LMNA-222ENST00000508500 SHANK3Q9BYB0 1731 aa22.69■■□□□ 1.22
LMNA-222ENST00000508500 PROM2Q8N271 834 aa22.69■■□□□ 1.22
LMNA-222ENST00000508500 ANO8Q9HCE9 1232 aaPredicted RBP22.69■■□□□ 1.22
LMNA-222ENST00000508500 IL2RBP14784 551 aa22.68■■□□□ 1.22
LMNA-222ENST00000508500 HOXC9P31274 260 aa22.68■■□□□ 1.22
LMNA-222ENST00000508500 CARD14Q9BXL6 1004 aa22.68■■□□□ 1.22
LMNA-222ENST00000508500 BTAF1O14981 1849 aa22.67■■□□□ 1.22
LMNA-222ENST00000508500 LTV1Q96GA3 475 aaPredicted RBP22.67■■□□□ 1.22
LMNA-222ENST00000508500 KCNQ2O43526 872 aa22.66■■□□□ 1.22
LMNA-222ENST00000508500 RRS1Q15050 365 aaKnown RBP22.65■■□□□ 1.22
LMNA-222ENST00000508500 CDCA8Q53HL2 280 aa22.65■■□□□ 1.22
LMNA-222ENST00000508500 SPON1Q9HCB6 807 aa22.64■■□□□ 1.21
LMNA-222ENST00000508500 MAP2P11137 1827 aaKnown RBP22.64■■□□□ 1.21
LMNA-222ENST00000508500 AMPHP49418 695 aa22.63■■□□□ 1.21
LMNA-222ENST00000508500 PAPPAQ13219 1627 aa22.63■■□□□ 1.21
LMNA-222ENST00000508500 ACSBG1Q96GR2 724 aa22.62■■□□□ 1.21
LMNA-222ENST00000508500 PDGFDQ9GZP0 370 aaPredicted RBP22.61■■□□□ 1.21
LMNA-222ENST00000508500 NSD3Q9BZ95 1437 aa22.6■■□□□ 1.21
LMNA-222ENST00000508500 RTL1A6NKG5 1358 aa22.6■■□□□ 1.21
LMNA-222ENST00000508500 ANKRD26Q9UPS8 1709 aa22.59■■□□□ 1.21
LMNA-222ENST00000508500 MEGF6O75095 1541 aa22.58■■□□□ 1.21
LMNA-222ENST00000508500 DOT1LQ8TEK3 1739 aa22.58■■□□□ 1.21
LMNA-222ENST00000508500 TXNRD1Q16881 649 aa22.58■■□□□ 1.21
LMNA-222ENST00000508500 CCER1Q8TC90 406 aaPredicted RBP22.58■■□□□ 1.21
LMNA-222ENST00000508500 NBPF6Q5VWK0 638 aa22.57■■□□□ 1.2
LMNA-222ENST00000508500 NBPF4Q96M43 638 aa22.57■■□□□ 1.2
LMNA-222ENST00000508500 HSP90AB2PQ58FF8 381 aa22.56■■□□□ 1.2
LMNA-222ENST00000508500 HSPA5P11021 654 aaKnown RBP22.55■■□□□ 1.2
LMNA-222ENST00000508500 PTGER2P43116 358 aa22.55■■□□□ 1.2
LMNA-222ENST00000508500 USHBP1Q8N6Y0 703 aa22.54■■□□□ 1.2
LMNA-222ENST00000508500 DDX54Q8TDD1 881 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms