RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 MTFR1LQ9H019 292 aa19.37■□□□□ 0.69
SGCA-206ENST00000508382 PAPPAQ13219 1627 aa19.36■□□□□ 0.69
SGCA-206ENST00000508382 MAP3K5Q99683 1374 aa19.36■□□□□ 0.69
SGCA-206ENST00000508382 C11orf95C9JLR9 678 aaPredicted RBP19.36■□□□□ 0.69
SGCA-206ENST00000508382 TXNRD1Q16881 649 aa19.36■□□□□ 0.69
SGCA-206ENST00000508382 NUDT16Q96DE0 195 aaKnown RBP19.36■□□□□ 0.69
SGCA-206ENST00000508382 MPHOSPH9Q99550 1183 aa19.36■□□□□ 0.69
SGCA-206ENST00000508382 COL18A1P39060 1754 aa19.36■□□□□ 0.69
SGCA-206ENST00000508382 POLR3AO14802 1390 aaPredicted RBP19.35■□□□□ 0.69
SGCA-206ENST00000508382 MARCH10Q8NA82 808 aaPredicted RBP19.35■□□□□ 0.69
SGCA-206ENST00000508382 STK32BQ9NY57 414 aa19.35■□□□□ 0.69
SGCA-206ENST00000508382 ARXQ96QS3 562 aa19.34■□□□□ 0.69
SGCA-206ENST00000508382 DDB1Q16531 1140 aa19.33■□□□□ 0.68
SGCA-206ENST00000508382 RGPD5Q99666 1765 aa19.33■□□□□ 0.68
SGCA-206ENST00000508382 COL24A1Q17RW2 1714 aa19.33■□□□□ 0.68
SGCA-206ENST00000508382 BCL9O00512 1426 aa19.33■□□□□ 0.68
SGCA-206ENST00000508382 ACEP12821 1306 aa19.32■□□□□ 0.68
SGCA-206ENST00000508382 GCP02774 474 aa19.3■□□□□ 0.68
SGCA-206ENST00000508382 ABTB2Q8N961 1025 aa19.3■□□□□ 0.68
SGCA-206ENST00000508382 GPR162Q16538 588 aa19.29■□□□□ 0.68
SGCA-206ENST00000508382 NHSQ6T4R5 1651 aa19.29■□□□□ 0.68
SGCA-206ENST00000508382 AATKQ6ZMQ8 1374 aa19.29■□□□□ 0.68
SGCA-206ENST00000508382 TONSLQ96HA7 1378 aa19.28■□□□□ 0.68
SGCA-206ENST00000508382 ZNF316A6NFI3 1004 aaPredicted RBP19.27■□□□□ 0.68
SGCA-206ENST00000508382 TUBGCP6Q96RT7 1819 aa19.27■□□□□ 0.68
SGCA-206ENST00000508382 CDK19Q9BWU1 502 aa19.25■□□□□ 0.67
SGCA-206ENST00000508382 BTAF1O14981 1849 aa19.25■□□□□ 0.67
SGCA-206ENST00000508382 QSER1Q2KHR3 1735 aa19.25■□□□□ 0.67
SGCA-206ENST00000508382 SLIT3O75094 1523 aa19.25■□□□□ 0.67
SGCA-206ENST00000508382 PLEKHG3A1L390 1219 aa19.24■□□□□ 0.67
SGCA-206ENST00000508382 ZBTB7CA1YPR0 619 aa19.24■□□□□ 0.67
SGCA-206ENST00000508382 ZNF827Q17R98 1081 aa19.24■□□□□ 0.67
SGCA-206ENST00000508382 TOM1L2Q6ZVM7 507 aa19.23■□□□□ 0.67
SGCA-206ENST00000508382 AXIN2Q9Y2T1 843 aa19.23■□□□□ 0.67
SGCA-206ENST00000508382 NLGN2Q8NFZ4 835 aa19.22■□□□□ 0.67
SGCA-206ENST00000508382 NLRP13Q86W25 1043 aa19.21■□□□□ 0.67
SGCA-206ENST00000508382 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
SGCA-206ENST00000508382 CCDC61Q9Y6R9 512 aa19.21■□□□□ 0.67
SGCA-206ENST00000508382 PIK3C2AO00443 1686 aa19.2■□□□□ 0.66
SGCA-206ENST00000508382 WDR17Q8IZU2 1322 aa19.2■□□□□ 0.66
SGCA-206ENST00000508382 ATP10DQ9P241 1426 aa19.19■□□□□ 0.66
SGCA-206ENST00000508382 YBX3P16989 372 aaKnown RBP eCLIP19.19■□□□□ 0.66
SGCA-206ENST00000508382 NEUROD1Q13562 356 aa19.19■□□□□ 0.66
SGCA-206ENST00000508382 KLHL34Q8N239 644 aa19.19■□□□□ 0.66
SGCA-206ENST00000508382 SIN3AQ96ST3 1273 aa19.18■□□□□ 0.66
SGCA-206ENST00000508382 LRRC4BQ9NT99 713 aa19.18■□□□□ 0.66
SGCA-206ENST00000508382 KAT6BQ8WYB5 2073 aa19.18■□□□□ 0.66
SGCA-206ENST00000508382 KDM2AQ9Y2K7 1162 aa19.17■□□□□ 0.66
SGCA-206ENST00000508382 TRPM1Q7Z4N2 1603 aa19.17■□□□□ 0.66
SGCA-206ENST00000508382 ACSBG1Q96GR2 724 aa19.16■□□□□ 0.66
SGCA-206ENST00000508382 HSPA6P17066 643 aa19.15■□□□□ 0.66
SGCA-206ENST00000508382 CDCA7Q9BWT1 371 aaPredicted RBP19.15■□□□□ 0.66
SGCA-206ENST00000508382 TNS2Q63HR2 1409 aa19.15■□□□□ 0.66
SGCA-206ENST00000508382 PPIP5K1Q6PFW1 1433 aa19.15■□□□□ 0.66
SGCA-206ENST00000508382 CPSF1Q10570 1443 aaKnown RBP19.14■□□□□ 0.65
SGCA-206ENST00000508382 AKT1S1Q96B36 256 aa19.13■□□□□ 0.65
SGCA-206ENST00000508382 ABCC6O95255 1503 aa19.12■□□□□ 0.65
SGCA-206ENST00000508382 EXOC5O00471 708 aa19.12■□□□□ 0.65
SGCA-206ENST00000508382 DCAF11Q8TEB1 546 aa19.12■□□□□ 0.65
SGCA-206ENST00000508382 CARD10Q9BWT7 1032 aa19.12■□□□□ 0.65
SGCA-206ENST00000508382 PNPLA7Q6ZV29 1317 aa19.11■□□□□ 0.65
SGCA-206ENST00000508382 NLRP6P59044 892 aa19.11■□□□□ 0.65
SGCA-206ENST00000508382 USP6P35125 1406 aa19.1■□□□□ 0.65
SGCA-206ENST00000508382 ADCY9O60503 1353 aa19.09■□□□□ 0.65
SGCA-206ENST00000508382 QRICH2Q9H0J4 1663 aa19.08■□□□□ 0.65
SGCA-206ENST00000508382 DIEXFQ68CQ4 756 aaKnown RBP19.08■□□□□ 0.64
SGCA-206ENST00000508382 ARHGEF25Q86VW2 580 aa19.08■□□□□ 0.64
SGCA-206ENST00000508382 SLC16A10Q8TF71 515 aa19.08■□□□□ 0.64
SGCA-206ENST00000508382 BRD4O60885 1362 aaPredicted RBP19.07■□□□□ 0.64
SGCA-206ENST00000508382 POLD1P28340 1107 aa19.07■□□□□ 0.64
SGCA-206ENST00000508382 NFAT5O94916 1531 aa19.06■□□□□ 0.64
SGCA-206ENST00000508382 GRIN3BO60391 1043 aa19.06■□□□□ 0.64
SGCA-206ENST00000508382 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
SGCA-206ENST00000508382 CABP2Q9NPB3 220 aa19.06■□□□□ 0.64
SGCA-206ENST00000508382 LY75O60449 1722 aa19.05■□□□□ 0.64
SGCA-206ENST00000508382 CSB-PGBD3P0DP91 1061 aa19.05■□□□□ 0.64
SGCA-206ENST00000508382 ZNF526Q8TF50 670 aaPredicted RBP19.05■□□□□ 0.64
SGCA-206ENST00000508382 KCNQ4P56696 695 aa19.04■□□□□ 0.64
SGCA-206ENST00000508382 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
SGCA-206ENST00000508382 KIAA1210Q9ULL0 1709 aa19.03■□□□□ 0.64
SGCA-206ENST00000508382 SRPK2P78362 688 aaKnown RBP19.02■□□□□ 0.64
SGCA-206ENST00000508382 CABP1Q9NZU7 370 aa19.02■□□□□ 0.64
SGCA-206ENST00000508382 SOX12O15370 315 aa19.01■□□□□ 0.63
SGCA-206ENST00000508382 LTN1O94822 1766 aa18.99■□□□□ 0.63
SGCA-206ENST00000508382 KIF3CO14782 793 aa18.99■□□□□ 0.63
SGCA-206ENST00000508382 DNAJC5GQ8N7S2 189 aa18.99■□□□□ 0.63
SGCA-206ENST00000508382 DOT1LQ8TEK3 1739 aa18.98■□□□□ 0.63
SGCA-206ENST00000508382 TFCP2L1Q9NZI6 479 aa18.98■□□□□ 0.63
SGCA-206ENST00000508382 NBPF1Q3BBV0 1214 aa18.97■□□□□ 0.63
SGCA-206ENST00000508382 SLC27A3Q5K4L6 730 aa18.97■□□□□ 0.63
SGCA-206ENST00000508382 COL23A1Q86Y22 540 aaPredicted RBP18.95■□□□□ 0.62
SGCA-206ENST00000508382 STAC3Q96MF2 364 aa18.95■□□□□ 0.62
SGCA-206ENST00000508382 TTC21BQ7Z4L5 1316 aa18.95■□□□□ 0.62
SGCA-206ENST00000508382 COL13A1Q5TAT6 717 aaPredicted RBP18.94■□□□□ 0.62
SGCA-206ENST00000508382 MSL1Q68DK7 614 aa18.94■□□□□ 0.62
SGCA-206ENST00000508382 KCNH5Q8NCM2 988 aa18.94■□□□□ 0.62
SGCA-206ENST00000508382 L3MBTL2Q969R5 705 aa18.94■□□□□ 0.62
SGCA-206ENST00000508382 ERBB3P21860 1342 aa18.94■□□□□ 0.62
SGCA-206ENST00000508382 WDR90Q96KV7 1748 aa18.94■□□□□ 0.62
SGCA-206ENST00000508382 NSD2O96028 1365 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms