RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 KCNH5Q8NCM2 988 aa17.15■□□□□ 0.34
PTPN20-218ENST00000508357 AXIN2Q9Y2T1 843 aa17.15■□□□□ 0.34
PTPN20-218ENST00000508357 SPATA31A5Q5VU36 1347 aa17.15■□□□□ 0.34
PTPN20-218ENST00000508357 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
PTPN20-218ENST00000508357 SPATA31A7Q8IWB4 1347 aa17.15■□□□□ 0.34
PTPN20-218ENST00000508357 PEAK1Q9H792 1746 aa17.14■□□□□ 0.33
PTPN20-218ENST00000508357 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
PTPN20-218ENST00000508357 GGNBP2Q9H3C7 697 aa17.14■□□□□ 0.33
PTPN20-218ENST00000508357 WNK3Q9BYP7 1800 aa17.14■□□□□ 0.33
PTPN20-218ENST00000508357 STRN4Q9NRL3 753 aa17.13■□□□□ 0.33
PTPN20-218ENST00000508357 FBLN1P23142 703 aa17.12■□□□□ 0.33
PTPN20-218ENST00000508357 LARP1Q6PKG0 1096 aaKnown RBP17.12■□□□□ 0.33
PTPN20-218ENST00000508357 SPATA31A1Q5TZJ5 1347 aa17.12■□□□□ 0.33
PTPN20-218ENST00000508357 COG3Q96JB2 828 aa17.11■□□□□ 0.33
PTPN20-218ENST00000508357 PANK3Q9H999 370 aa17.11■□□□□ 0.33
PTPN20-218ENST00000508357 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
PTPN20-218ENST00000508357 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
PTPN20-218ENST00000508357 CRB1P82279 1406 aa17.1■□□□□ 0.33
PTPN20-218ENST00000508357 EP400Q96L91 3159 aa17.09■□□□□ 0.33
PTPN20-218ENST00000508357 ONECUT3O60422 494 aaPredicted RBP17.08■□□□□ 0.32
PTPN20-218ENST00000508357 FAM98CQ17RN3 349 aaKnown RBP17.08■□□□□ 0.32
PTPN20-218ENST00000508357 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
PTPN20-218ENST00000508357 BLMP54132 1417 aaPredicted RBP17.07■□□□□ 0.32
PTPN20-218ENST00000508357 ERBB3P21860 1342 aa17.07■□□□□ 0.32
PTPN20-218ENST00000508357 CGNL1Q0VF96 1302 aa17.07■□□□□ 0.32
PTPN20-218ENST00000508357 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
PTPN20-218ENST00000508357 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
PTPN20-218ENST00000508357 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
PTPN20-218ENST00000508357 RRS1Q15050 365 aaKnown RBP17.06■□□□□ 0.32
PTPN20-218ENST00000508357 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
PTPN20-218ENST00000508357 DISP2A7MBM2 1401 aa17.05■□□□□ 0.32
PTPN20-218ENST00000508357 FAM208AQ9UK61 1670 aaKnown RBP17.05■□□□□ 0.32
PTPN20-218ENST00000508357 EVA1CP58658 441 aa17.04■□□□□ 0.32
PTPN20-218ENST00000508357 USP35Q9P2H5 1018 aa17.04■□□□□ 0.32
PTPN20-218ENST00000508357 RGPD2P0DJD1 1756 aa17.04■□□□□ 0.32
PTPN20-218ENST00000508357 NSD2O96028 1365 aa17.03■□□□□ 0.32
PTPN20-218ENST00000508357 HOXC9P31274 260 aa17.03■□□□□ 0.32
PTPN20-218ENST00000508357 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
PTPN20-218ENST00000508357 IP6K1Q92551 441 aa17.03■□□□□ 0.32
PTPN20-218ENST00000508357 PER1O15534 1290 aaPredicted RBP17.02■□□□□ 0.32
PTPN20-218ENST00000508357 BARGINQ6ZT62 677 aa17.02■□□□□ 0.32
PTPN20-218ENST00000508357 TCP11L2Q8N4U5 519 aa17.02■□□□□ 0.32
PTPN20-218ENST00000508357 EMILIN1Q9Y6C2 1016 aa17.02■□□□□ 0.32
PTPN20-218ENST00000508357 SMG6Q86US8 1419 aaKnown RBP17.02■□□□□ 0.31
PTPN20-218ENST00000508357 POTEDQ86YR6 584 aa17.01■□□□□ 0.31
PTPN20-218ENST00000508357 ANKRD24Q8TF21 1146 aa17.01■□□□□ 0.31
PTPN20-218ENST00000508357 MAP2P11137 1827 aaKnown RBP17■□□□□ 0.31
PTPN20-218ENST00000508357 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
PTPN20-218ENST00000508357 UPF1Q92900 1129 aaKnown RBP eCLIP16.99■□□□□ 0.31
PTPN20-218ENST00000508357 CARD10Q9BWT7 1032 aa16.99■□□□□ 0.31
PTPN20-218ENST00000508357 THRAP3Q9Y2W1 955 aaKnown RBP16.99■□□□□ 0.31
PTPN20-218ENST00000508357 FLT4P35916 1363 aa16.99■□□□□ 0.31
PTPN20-218ENST00000508357 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
PTPN20-218ENST00000508357 A0A0G2JS52 829 aa16.98■□□□□ 0.31
PTPN20-218ENST00000508357 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
PTPN20-218ENST00000508357 AMPHP49418 695 aa16.98■□□□□ 0.31
PTPN20-218ENST00000508357 MYT1Q01538 1121 aa16.98■□□□□ 0.31
PTPN20-218ENST00000508357 KNSTRNQ9Y448 316 aa16.98■□□□□ 0.31
PTPN20-218ENST00000508357 INSRP06213 1382 aa16.98■□□□□ 0.31
PTPN20-218ENST00000508357 KRT27Q7Z3Y8 459 aa16.97■□□□□ 0.31
PTPN20-218ENST00000508357 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
PTPN20-218ENST00000508357 HSP90AB2PQ58FF8 381 aa16.96■□□□□ 0.31
PTPN20-218ENST00000508357 LTV1Q96GA3 475 aaPredicted RBP16.96■□□□□ 0.31
PTPN20-218ENST00000508357 POLKQ9UBT6 870 aa16.96■□□□□ 0.31
PTPN20-218ENST00000508357 TNS1Q9HBL0 1735 aaKnown RBP16.96■□□□□ 0.3
PTPN20-218ENST00000508357 TNS2Q63HR2 1409 aa16.96■□□□□ 0.3
PTPN20-218ENST00000508357 NPC1L1Q9UHC9 1359 aa16.95■□□□□ 0.3
PTPN20-218ENST00000508357 FAM182BQ5T319 152 aa16.95■□□□□ 0.3
PTPN20-218ENST00000508357 SHANK3Q9BYB0 1731 aa16.95■□□□□ 0.3
PTPN20-218ENST00000508357 MEGF6O75095 1541 aa16.95■□□□□ 0.3
PTPN20-218ENST00000508357 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
PTPN20-218ENST00000508357 NLRP2Q9NX02 1062 aa16.94■□□□□ 0.3
PTPN20-218ENST00000508357 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
PTPN20-218ENST00000508357 MORC1Q86VD1 984 aa16.92■□□□□ 0.3
PTPN20-218ENST00000508357 RGPD1P0DJD0 1748 aa16.91■□□□□ 0.3
PTPN20-218ENST00000508357 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
PTPN20-218ENST00000508357 NBPF6Q5VWK0 638 aa16.91■□□□□ 0.3
PTPN20-218ENST00000508357 NBPF4Q96M43 638 aa16.91■□□□□ 0.3
PTPN20-218ENST00000508357 PPM1GO15355 546 aaPredicted RBP16.9■□□□□ 0.3
PTPN20-218ENST00000508357 USHBP1Q8N6Y0 703 aa16.9■□□□□ 0.3
PTPN20-218ENST00000508357 OVOS2A0A0G2JMS6 1433 aa16.89■□□□□ 0.29
PTPN20-218ENST00000508357 COL3A1P02461 1466 aaPredicted RBP16.89■□□□□ 0.29
PTPN20-218ENST00000508357 SBF2Q86WG5 1849 aa16.88■□□□□ 0.29
PTPN20-218ENST00000508357 PKD1L3Q7Z443 1732 aa16.87■□□□□ 0.29
PTPN20-218ENST00000508357 IL2RBP14784 551 aa16.87■□□□□ 0.29
PTPN20-218ENST00000508357 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
PTPN20-218ENST00000508357 DDB1Q16531 1140 aa16.87■□□□□ 0.29
PTPN20-218ENST00000508357 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
PTPN20-218ENST00000508357 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
PTPN20-218ENST00000508357 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
PTPN20-218ENST00000508357 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
PTPN20-218ENST00000508357 BCL9O00512 1426 aa16.85■□□□□ 0.29
PTPN20-218ENST00000508357 EYA1Q99502 592 aa16.84■□□□□ 0.29
PTPN20-218ENST00000508357 NHSQ6T4R5 1651 aa16.84■□□□□ 0.29
PTPN20-218ENST00000508357 IGSF1Q8N6C5 1336 aa16.83■□□□□ 0.28
PTPN20-218ENST00000508357 FAM196AQ6ZSG2 479 aa16.82■□□□□ 0.28
PTPN20-218ENST00000508357 DOT1LQ8TEK3 1739 aa16.82■□□□□ 0.28
PTPN20-218ENST00000508357 PARD3Q8TEW0 1356 aa16.81■□□□□ 0.28
PTPN20-218ENST00000508357 MTHFSP49914 203 aa16.81■□□□□ 0.28
PTPN20-218ENST00000508357 PTF1AQ7RTS3 328 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms