RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 TCP11L2Q8N4U5 519 aa27.62■■■□□ 2.01
SFXN1-209ENST00000508290 COG3Q96JB2 828 aa27.61■■■□□ 2.01
SFXN1-209ENST00000508290 SOX12O15370 315 aa27.6■■■□□ 2.01
SFXN1-209ENST00000508290 HSPA5P11021 654 aaKnown RBP27.6■■■□□ 2.01
SFXN1-209ENST00000508290 WDR17Q8IZU2 1322 aa27.6■■■□□ 2.01
SFXN1-209ENST00000508290 COL18A1P39060 1754 aa27.6■■■□□ 2.01
SFXN1-209ENST00000508290 ZRANB1Q9UGI0 708 aa27.59■■■□□ 2.01
SFXN1-209ENST00000508290 BLMP54132 1417 aaPredicted RBP27.58■■■□□ 2
SFXN1-209ENST00000508290 USP35Q9P2H5 1018 aa27.57■■■□□ 2
SFXN1-209ENST00000508290 BRWD3Q6RI45 1802 aa27.57■■■□□ 2
SFXN1-209ENST00000508290 TOM1L2Q6ZVM7 507 aa27.56■■■□□ 2
SFXN1-209ENST00000508290 AXIN2Q9Y2T1 843 aa27.56■■■□□ 2
SFXN1-209ENST00000508290 MYOM1P52179 1685 aa27.56■■■□□ 2
SFXN1-209ENST00000508290 CDCA7Q9BWT1 371 aaPredicted RBP27.54■■■□□ 2
SFXN1-209ENST00000508290 C11orf95C9JLR9 678 aaPredicted RBP27.52■■■□□ 2
SFXN1-209ENST00000508290 FYB1O15117 783 aa27.52■■■□□ 2
SFXN1-209ENST00000508290 CSB-PGBD3P0DP91 1061 aa27.52■■■□□ 2
SFXN1-209ENST00000508290 CARD10Q9BWT7 1032 aa27.52■■■□□ 2
SFXN1-209ENST00000508290 SF3B2Q13435 895 aaKnown RBP27.51■■□□□ 1.99
SFXN1-209ENST00000508290 EP400Q96L91 3159 aa27.5■■□□□ 1.99
SFXN1-209ENST00000508290 CCDC7Q96M83 1385 aa27.5■■□□□ 1.99
SFXN1-209ENST00000508290 PDE3BQ13370 1112 aa27.5■■□□□ 1.99
SFXN1-209ENST00000508290 ERBB3P21860 1342 aa27.49■■□□□ 1.99
SFXN1-209ENST00000508290 NSD3Q9BZ95 1437 aa27.49■■□□□ 1.99
SFXN1-209ENST00000508290 CGNL1Q0VF96 1302 aa27.47■■□□□ 1.99
SFXN1-209ENST00000508290 FAM196AQ6ZSG2 479 aa27.47■■□□□ 1.99
SFXN1-209ENST00000508290 IP6K1Q92551 441 aa27.47■■□□□ 1.99
SFXN1-209ENST00000508290 CARD14Q9BXL6 1004 aa27.47■■□□□ 1.99
SFXN1-209ENST00000508290 LTN1O94822 1766 aa27.47■■□□□ 1.99
SFXN1-209ENST00000508290 PARP4Q9UKK3 1724 aaKnown RBP27.47■■□□□ 1.99
SFXN1-209ENST00000508290 RTL1A6NKG5 1358 aa27.47■■□□□ 1.99
SFXN1-209ENST00000508290 POLR3GLQ9BT43 218 aa27.45■■□□□ 1.98
SFXN1-209ENST00000508290 GGNBP2Q9H3C7 697 aa27.45■■□□□ 1.98
SFXN1-209ENST00000508290 KIF24Q5T7B8 1368 aa27.45■■□□□ 1.98
SFXN1-209ENST00000508290 KIF20BQ96Q89 1820 aa27.44■■□□□ 1.98
SFXN1-209ENST00000508290 MAP3K19Q56UN5 1328 aa27.43■■□□□ 1.98
SFXN1-209ENST00000508290 AMPHP49418 695 aa27.42■■□□□ 1.98
SFXN1-209ENST00000508290 DDB1Q16531 1140 aa27.42■■□□□ 1.98
SFXN1-209ENST00000508290 ANKRD24Q8TF21 1146 aa27.42■■□□□ 1.98
SFXN1-209ENST00000508290 RGPD5Q99666 1765 aa27.4■■□□□ 1.98
SFXN1-209ENST00000508290 DISP2A7MBM2 1401 aa27.4■■□□□ 1.98
SFXN1-209ENST00000508290 FAM208AQ9UK61 1670 aaKnown RBP27.4■■□□□ 1.98
SFXN1-209ENST00000508290 BAG6P46379 1132 aa27.39■■□□□ 1.98
SFXN1-209ENST00000508290 NLRP2Q9NX02 1062 aa27.39■■□□□ 1.98
SFXN1-209ENST00000508290 HOXC9P31274 260 aa27.38■■□□□ 1.97
SFXN1-209ENST00000508290 RGPD1P0DJD0 1748 aa27.38■■□□□ 1.97
SFXN1-209ENST00000508290 WNK3Q9BYP7 1800 aa27.37■■□□□ 1.97
SFXN1-209ENST00000508290 OVOS2A0A0G2JMS6 1433 aa27.37■■□□□ 1.97
SFXN1-209ENST00000508290 LRRC37A3O60309 1634 aa27.37■■□□□ 1.97
SFXN1-209ENST00000508290 NSD2O96028 1365 aa27.36■■□□□ 1.97
SFXN1-209ENST00000508290 SMG6Q86US8 1419 aaKnown RBP27.35■■□□□ 1.97
SFXN1-209ENST00000508290 FAM182BQ5T319 152 aa27.34■■□□□ 1.97
SFXN1-209ENST00000508290 PANK3Q9H999 370 aa27.34■■□□□ 1.97
SFXN1-209ENST00000508290 FLT4P35916 1363 aa27.34■■□□□ 1.97
SFXN1-209ENST00000508290 BCL9O00512 1426 aa27.33■■□□□ 1.97
SFXN1-209ENST00000508290 EXOC5O00471 708 aa27.33■■□□□ 1.97
SFXN1-209ENST00000508290 IL2RBP14784 551 aa27.32■■□□□ 1.96
SFXN1-209ENST00000508290 RRS1Q15050 365 aaKnown RBP27.32■■□□□ 1.96
SFXN1-209ENST00000508290 INSRP06213 1382 aa27.32■■□□□ 1.96
SFXN1-209ENST00000508290 TNS2Q63HR2 1409 aa27.32■■□□□ 1.96
SFXN1-209ENST00000508290 KIF7Q2M1P5 1343 aa27.31■■□□□ 1.96
SFXN1-209ENST00000508290 PARD3Q8TEW0 1356 aa27.3■■□□□ 1.96
SFXN1-209ENST00000508290 TRIM37O94972 964 aa27.28■■□□□ 1.96
SFXN1-209ENST00000508290 FBLN1P23142 703 aa27.28■■□□□ 1.96
SFXN1-209ENST00000508290 DEFB132Q7Z7B7 95 aa27.28■■□□□ 1.96
SFXN1-209ENST00000508290 LTV1Q96GA3 475 aaPredicted RBP27.27■■□□□ 1.96
SFXN1-209ENST00000508290 KNSTRNQ9Y448 316 aa27.27■■□□□ 1.96
SFXN1-209ENST00000508290 PEAK1Q9H792 1746 aa27.27■■□□□ 1.96
SFXN1-209ENST00000508290 TNS1Q9HBL0 1735 aaKnown RBP27.26■■□□□ 1.95
SFXN1-209ENST00000508290 ANKRD26Q9UPS8 1709 aa27.26■■□□□ 1.95
SFXN1-209ENST00000508290 MARCH10Q8NA82 808 aaPredicted RBP27.24■■□□□ 1.95
SFXN1-209ENST00000508290 WASHC2AQ641Q2 1341 aa27.22■■□□□ 1.95
SFXN1-209ENST00000508290 APBA3O96018 575 aa27.22■■□□□ 1.95
SFXN1-209ENST00000508290 HSP90AB2PQ58FF8 381 aa27.22■■□□□ 1.95
SFXN1-209ENST00000508290 EMILIN1Q9Y6C2 1016 aa27.21■■□□□ 1.95
SFXN1-209ENST00000508290 EN1Q05925 392 aaPredicted RBP27.2■■□□□ 1.94
SFXN1-209ENST00000508290 BCL11BQ9C0K0 894 aaPredicted RBP27.2■■□□□ 1.94
SFXN1-209ENST00000508290 POLKQ9UBT6 870 aa27.18■■□□□ 1.94
SFXN1-209ENST00000508290 NBPF6Q5VWK0 638 aa27.17■■□□□ 1.94
SFXN1-209ENST00000508290 MORC1Q86VD1 984 aa27.17■■□□□ 1.94
SFXN1-209ENST00000508290 NBPF4Q96M43 638 aa27.17■■□□□ 1.94
SFXN1-209ENST00000508290 CAMKK2Q96RR4 588 aa27.17■■□□□ 1.94
SFXN1-209ENST00000508290 PPM1GO15355 546 aaPredicted RBP27.16■■□□□ 1.94
SFXN1-209ENST00000508290 RAPGEF4Q8WZA2 1011 aa27.16■■□□□ 1.94
SFXN1-209ENST00000508290 PLSCR1O15162 318 aa27.14■■□□□ 1.94
SFXN1-209ENST00000508290 AMER1Q5JTC6 1135 aaPredicted RBP27.14■■□□□ 1.94
SFXN1-209ENST00000508290 RGPD3A6NKT7 1758 aaPredicted RBP27.12■■□□□ 1.93
SFXN1-209ENST00000508290 RGPD4Q7Z3J3 1758 aa27.12■■□□□ 1.93
SFXN1-209ENST00000508290 EZH2Q15910 746 aaKnown RBP27.12■■□□□ 1.93
SFXN1-209ENST00000508290 ZCRB1Q8TBF4 217 aaKnown RBP27.12■■□□□ 1.93
SFXN1-209ENST00000508290 NCAPD2Q15021 1401 aa27.12■■□□□ 1.93
SFXN1-209ENST00000508290 PLEKHG2Q9H7P9 1386 aa27.11■■□□□ 1.93
SFXN1-209ENST00000508290 NPC1L1Q9UHC9 1359 aa27.11■■□□□ 1.93
SFXN1-209ENST00000508290 TATP17735 454 aaPredicted RBP27.11■■□□□ 1.93
SFXN1-209ENST00000508290 TNNT2P45379 298 aaPredicted RBP27.11■■□□□ 1.93
SFXN1-209ENST00000508290 SBF2Q86WG5 1849 aa27.11■■□□□ 1.93
SFXN1-209ENST00000508290 MEGF6O75095 1541 aa27.11■■□□□ 1.93
SFXN1-209ENST00000508290 PER1O15534 1290 aaPredicted RBP27.1■■□□□ 1.93
SFXN1-209ENST00000508290 MAP2P11137 1827 aaKnown RBP27.1■■□□□ 1.93
SFXN1-209ENST00000508290 NHSQ6T4R5 1651 aa27.08■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms